BLASTX nr result

ID: Coptis21_contig00024322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024322
         (1161 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284712.1| PREDICTED: uncharacterized protein LOC100264...   467   e-129
ref|XP_002512379.1| conserved hypothetical protein [Ricinus comm...   460   e-127
ref|NP_568497.1| uncharacterized protein [Arabidopsis thaliana] ...   454   e-125
ref|XP_002874364.1| hypothetical protein ARALYDRAFT_489571 [Arab...   449   e-124
ref|XP_002319008.1| predicted protein [Populus trichocarpa] gi|1...   447   e-123

>ref|XP_002284712.1| PREDICTED: uncharacterized protein LOC100264831 [Vitis vinifera]
            gi|296088326|emb|CBI36771.3| unnamed protein product
            [Vitis vinifera]
          Length = 353

 Score =  467 bits (1202), Expect = e-129
 Identities = 237/300 (79%), Positives = 260/300 (86%), Gaps = 12/300 (4%)
 Frame = +2

Query: 161  THAKFDKFE------------TVSSFSTLDDDTREQPILETEEEDDSCLPSDLEGAVRQS 304
            T AKF+KF+               S S+   ++++Q I E  EEDDSCLPSDLEGAVRQS
Sbjct: 54   TRAKFEKFQDDPPQADDLQFSAAPSQSSSPLESQQQAIQEEVEEDDSCLPSDLEGAVRQS 113

Query: 305  SEAAATFVLSGGLRAIVELLIPQLQFLDDEGAQAELWGLSRIFLETLIKETGCQRVKAIF 484
             +A+A+FV SGG+RAIVELLIPQLQFLDDEGAQAELW LSRIF++TLI+ETGCQRVKAIF
Sbjct: 114  GQASASFVSSGGMRAIVELLIPQLQFLDDEGAQAELWELSRIFIDTLIEETGCQRVKAIF 173

Query: 485  PDAGAAALLKYQWKDAAFGFASLSDRKPVESEDELVVMVVPDYQMLEYVERIAKYLSDDP 664
            PDAGAAALLKY+W DAAFGFASLSDRKPVE+EDELVVMVVPDYQML YVERIA  LSDDP
Sbjct: 174  PDAGAAALLKYRWGDAAFGFASLSDRKPVEAEDELVVMVVPDYQMLAYVERIASNLSDDP 233

Query: 665  PRPLIMWNPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRPFPAGAVFRCYPGLWKVFYD 844
            PRPLIMWNPRLISEDVGVGFNVRKLRR FLSTFT VYSMRP PAGAVFRCYPG WKVFYD
Sbjct: 234  PRPLIMWNPRLISEDVGVGFNVRKLRRSFLSTFTVVYSMRPLPAGAVFRCYPGSWKVFYD 293

Query: 845  DKERPNRYLLAKEQISRPDAEDLEIIFGDVQEKSDNGPSLLDRAAGIFSSVNRFMKVISR 1024
            DK+RPNRYLLAKEQISRPDAE+LEIIFGDVQ+KS+ GPS   +AA IFSS+NRFMKVIS+
Sbjct: 294  DKDRPNRYLLAKEQISRPDAEELEIIFGDVQDKSEKGPSFFGQAASIFSSLNRFMKVISK 353


>ref|XP_002512379.1| conserved hypothetical protein [Ricinus communis]
            gi|223548340|gb|EEF49831.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 343

 Score =  460 bits (1184), Expect = e-127
 Identities = 232/294 (78%), Positives = 261/294 (88%), Gaps = 4/294 (1%)
 Frame = +2

Query: 155  TRTHAKFDKFETVSSFSTLDDDT---REQPILETEEEDDSCLPSDLEGAVRQSSEAAATF 325
            +R HAKF+KF+  S  +   ++T   +EQP+ E +EEDDSCLPSDLEGAVRQSSEA+A F
Sbjct: 51   SRIHAKFEKFQGESQDNLEVEETTQLQEQPV-EDKEEDDSCLPSDLEGAVRQSSEASALF 109

Query: 326  VLSGGLRAIVELLIPQLQFLDDEGAQAELWGLSRIFLETLIKETGCQRVKAIFPDAGAAA 505
            V SGG++AIVELLIPQLQFLD+EGAQAELW LSRIFL+TLI+ETGCQ+VKAIFPDAGAAA
Sbjct: 110  VSSGGMKAIVELLIPQLQFLDEEGAQAELWELSRIFLDTLIEETGCQKVKAIFPDAGAAA 169

Query: 506  LLKYQWKDAAFGFASLSDRKPVESEDELVVMVVPDYQMLEYVERIAKYLSDDPPRPLIMW 685
            LLKYQWKDA FGFASLSDRKPVE+EDE+VVMVVPDYQML YVE+IA  LSDDPPRPLIMW
Sbjct: 170  LLKYQWKDATFGFASLSDRKPVENEDEIVVMVVPDYQMLGYVEKIASNLSDDPPRPLIMW 229

Query: 686  NPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRPFPAGAVFRCYPGLWKVFYDDKERPNR 865
            NPRLISEDVGVG NVR LRRYFLS FTTVYSMRP P+GAVFRCYPG+WKVFYDDK+RPNR
Sbjct: 230  NPRLISEDVGVGINVRNLRRYFLSAFTTVYSMRPLPSGAVFRCYPGMWKVFYDDKDRPNR 289

Query: 866  YLLAKEQISRPDAEDLEIIFGDVQEKSD-NGPSLLDRAAGIFSSVNRFMKVISR 1024
            YLLAKE I RPDAE+LEIIFG+  EKS+  GPS  ++AAGIFSS+NRFMK IS+
Sbjct: 290  YLLAKELIRRPDAEELEIIFGNGDEKSEQQGPSFFNQAAGIFSSLNRFMKAISK 343


>ref|NP_568497.1| uncharacterized protein [Arabidopsis thaliana]
            gi|13877993|gb|AAK44074.1|AF370259_1 unknown protein
            [Arabidopsis thaliana] gi|17104721|gb|AAL34249.1| unknown
            protein [Arabidopsis thaliana]
            gi|332006318|gb|AED93701.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 341

 Score =  454 bits (1167), Expect = e-125
 Identities = 228/297 (76%), Positives = 254/297 (85%), Gaps = 12/297 (4%)
 Frame = +2

Query: 158  RTHAKFDKFE---------TVSSFSTLDDDT---REQPILETEEEDDSCLPSDLEGAVRQ 301
            RT  KF+KF+         +VSS S++  +      Q  LE EE+DD CLP+DLEGAVRQ
Sbjct: 43   RTCVKFEKFQGDSPLEQNTSVSSSSSVSQELPLEEAQDQLEEEEDDDDCLPNDLEGAVRQ 102

Query: 302  SSEAAATFVLSGGLRAIVELLIPQLQFLDDEGAQAELWGLSRIFLETLIKETGCQRVKAI 481
            S EA A FV SGG RAIVELLIPQLQFLDDEGAQAELW LSR+FLETLIKETGC+RVKA+
Sbjct: 103  SGEAGAAFVNSGGNRAIVELLIPQLQFLDDEGAQAELWDLSRVFLETLIKETGCERVKAV 162

Query: 482  FPDAGAAALLKYQWKDAAFGFASLSDRKPVESEDELVVMVVPDYQMLEYVERIAKYLSDD 661
            FPDAGAAALLKY+WKDA FGFASLSDRKPVE EDE++VMVVPDYQMLEYVE+IA  L+DD
Sbjct: 163  FPDAGAAALLKYRWKDATFGFASLSDRKPVEKEDEIIVMVVPDYQMLEYVEKIANGLADD 222

Query: 662  PPRPLIMWNPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRPFPAGAVFRCYPGLWKVFY 841
            PPRPLIMWNPRLISE+VGVGFNVRKLRRYFLS+FTTVYSMRP  AGAVFRCYPG WKVFY
Sbjct: 223  PPRPLIMWNPRLISEEVGVGFNVRKLRRYFLSSFTTVYSMRPLAAGAVFRCYPGKWKVFY 282

Query: 842  DDKERPNRYLLAKEQISRPDAEDLEIIFGDVQEKSDNGPSLLDRAAGIFSSVNRFMK 1012
            D+K+RP RYLLAKE I RPDAEDLEII+G V+EKS+ GPSL+ +AAGIFSS+NRFMK
Sbjct: 283  DNKDRPGRYLLAKELIGRPDAEDLEIIYGGVEEKSEEGPSLMSQAAGIFSSINRFMK 339


>ref|XP_002874364.1| hypothetical protein ARALYDRAFT_489571 [Arabidopsis lyrata subsp.
            lyrata] gi|297320201|gb|EFH50623.1| hypothetical protein
            ARALYDRAFT_489571 [Arabidopsis lyrata subsp. lyrata]
          Length = 340

 Score =  449 bits (1156), Expect = e-124
 Identities = 228/299 (76%), Positives = 255/299 (85%), Gaps = 14/299 (4%)
 Frame = +2

Query: 158  RTHAKFDKF------ETVSSFST--------LDDDTREQPILETEEEDDSCLPSDLEGAV 295
            RT  KFDKF      E  +S ST        L+++ ++Q  LE +E  + CLP+DLEGAV
Sbjct: 42   RTCVKFDKFQGDSPLEPTTSVSTSSVSQELPLEEEAQDQ--LEDDEFSNFCLPNDLEGAV 99

Query: 296  RQSSEAAATFVLSGGLRAIVELLIPQLQFLDDEGAQAELWGLSRIFLETLIKETGCQRVK 475
            RQS EA A FV SGG RAIVELLIPQLQFLDDEGAQAELW LSR+FL+TLIKETGC+RVK
Sbjct: 100  RQSGEAGAAFVNSGGTRAIVELLIPQLQFLDDEGAQAELWDLSRVFLDTLIKETGCERVK 159

Query: 476  AIFPDAGAAALLKYQWKDAAFGFASLSDRKPVESEDELVVMVVPDYQMLEYVERIAKYLS 655
            A+FPDAGAAALLKY+WKDA FGFASLSDRKPVE EDE++VMVVPDYQMLEYVE+IAK L+
Sbjct: 160  AVFPDAGAAALLKYRWKDATFGFASLSDRKPVEKEDEIIVMVVPDYQMLEYVEKIAKGLA 219

Query: 656  DDPPRPLIMWNPRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRPFPAGAVFRCYPGLWKV 835
            DDPPRPLIMWNPRLISE+VGVGFNVRKLRRYFLS+FTTVYSMRP  AGAVFRCYPG WKV
Sbjct: 220  DDPPRPLIMWNPRLISEEVGVGFNVRKLRRYFLSSFTTVYSMRPLAAGAVFRCYPGKWKV 279

Query: 836  FYDDKERPNRYLLAKEQISRPDAEDLEIIFGDVQEKSDNGPSLLDRAAGIFSSVNRFMK 1012
            FYD+K+RP RYLLAKE I RPDAEDLEII+G V+EKS+ GPSLL +AAGIFSS+NRFMK
Sbjct: 280  FYDNKDRPGRYLLAKELIGRPDAEDLEIIYGGVEEKSEEGPSLLSQAAGIFSSINRFMK 338


>ref|XP_002319008.1| predicted protein [Populus trichocarpa] gi|118487454|gb|ABK95555.1|
            unknown [Populus trichocarpa] gi|222857384|gb|EEE94931.1|
            predicted protein [Populus trichocarpa]
          Length = 339

 Score =  447 bits (1149), Expect = e-123
 Identities = 224/292 (76%), Positives = 256/292 (87%), Gaps = 2/292 (0%)
 Frame = +2

Query: 155  TRTHAKFDKFE-TVSSFSTLDDDTREQPILET-EEEDDSCLPSDLEGAVRQSSEAAATFV 328
            +R  AKF+KFE   +S   L++    Q   +T +EEDDSCLPSDLEGAVRQSS+A+A FV
Sbjct: 48   SRILAKFEKFEGDDASQDNLEEAMELQEQAQTVQEEDDSCLPSDLEGAVRQSSQASALFV 107

Query: 329  LSGGLRAIVELLIPQLQFLDDEGAQAELWGLSRIFLETLIKETGCQRVKAIFPDAGAAAL 508
             SGG+RAIVELLIPQLQFLDDEGAQAELW LSRIFL+TLI+ETG QR+KAIFPDAGAAAL
Sbjct: 108  SSGGMRAIVELLIPQLQFLDDEGAQAELWELSRIFLDTLIEETGSQRIKAIFPDAGAAAL 167

Query: 509  LKYQWKDAAFGFASLSDRKPVESEDELVVMVVPDYQMLEYVERIAKYLSDDPPRPLIMWN 688
            LKY WKDAAFGF+SLSDRKPV+ ED++VVMVVPDYQMLE V++I   LSDDPPRPLIMWN
Sbjct: 168  LKYLWKDAAFGFSSLSDRKPVQIEDDIVVMVVPDYQMLEKVQKIVSDLSDDPPRPLIMWN 227

Query: 689  PRLISEDVGVGFNVRKLRRYFLSTFTTVYSMRPFPAGAVFRCYPGLWKVFYDDKERPNRY 868
            PRLISEDVGVG NVR LRRYFLSTFTTVYSMRP PAGAVFRCYP +WKVFYDDK+RPNRY
Sbjct: 228  PRLISEDVGVGINVRNLRRYFLSTFTTVYSMRPLPAGAVFRCYPEMWKVFYDDKDRPNRY 287

Query: 869  LLAKEQISRPDAEDLEIIFGDVQEKSDNGPSLLDRAAGIFSSVNRFMKVISR 1024
            LLA+E + RPDAE++EIIFG+ +EKS+ GPSL  +AAGIFSS+NRFM+VIS+
Sbjct: 288  LLAQESVRRPDAEEIEIIFGNAEEKSEQGPSLFSKAAGIFSSLNRFMRVISK 339


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