BLASTX nr result

ID: Coptis21_contig00024320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024320
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20063.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002273325.1| PREDICTED: uncharacterized protein LOC100257...   117   1e-24
emb|CBI23750.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|XP_002265509.1| PREDICTED: uncharacterized protein LOC100260...   112   2e-23
emb|CAN69646.1| hypothetical protein VITISV_022132 [Vitis vinifera]   112   4e-23

>emb|CBI20063.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
 Frame = +2

Query: 104 SWWESISKARTRIQLLSTILQTPSVS----SLADSDHPARSLLESQESYSTISSFLSNPL 271
           SWWESISKAR+RI +LSTIL +PS+S    SLADSD PARSLL+S ++Y  +SS LS P 
Sbjct: 51  SWWESISKARSRIHVLSTILPSPSLSLSLSSLADSDRPARSLLQSPDAYDALSSSLSCPR 110

Query: 272 SGSGNDPLCQWLYETYQSSDP 334
           SGSG+DPLCQWLYET+QSSDP
Sbjct: 111 SGSGSDPLCQWLYETFQSSDP 131


>ref|XP_002273325.1| PREDICTED: uncharacterized protein LOC100257164 [Vitis vinifera]
          Length = 401

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/81 (71%), Positives = 68/81 (83%), Gaps = 4/81 (4%)
 Frame = +2

Query: 104 SWWESISKARTRIQLLSTILQTPSVS----SLADSDHPARSLLESQESYSTISSFLSNPL 271
           SWWESISKAR+RI +LSTIL +PS+S    SLADSD PARSLL+S ++Y  +SS LS P 
Sbjct: 34  SWWESISKARSRIHVLSTILPSPSLSLSLSSLADSDRPARSLLQSPDAYDALSSSLSCPR 93

Query: 272 SGSGNDPLCQWLYETYQSSDP 334
           SGSG+DPLCQWLYET+QSSDP
Sbjct: 94  SGSGSDPLCQWLYETFQSSDP 114


>emb|CBI23750.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
 Frame = +2

Query: 101 QSWWESISKARTRIQLLSTILQTPS--VSSLADSDHPARSLLESQESYSTISSFLSNPLS 274
           QSWWESISKAR RI  LS+IL +PS  +SSLADSD PARSLL+S + Y  + S L +P S
Sbjct: 622 QSWWESISKARARIHALSSILSSPSPSISSLADSDRPARSLLQSPDVYDAVCSSLFSPQS 681

Query: 275 GSGNDPLCQWLYETYQSSDP 334
           GSG DP+CQWLYET+QSSDP
Sbjct: 682 GSGPDPICQWLYETFQSSDP 701


>ref|XP_002265509.1| PREDICTED: uncharacterized protein LOC100260050 [Vitis vinifera]
          Length = 400

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
 Frame = +2

Query: 101 QSWWESISKARTRIQLLSTILQTPS--VSSLADSDHPARSLLESQESYSTISSFLSNPLS 274
           QSWWESISKAR RI  LS+IL +PS  +SSLADSD PARSLL+S + Y  + S L +P S
Sbjct: 33  QSWWESISKARARIHALSSILSSPSPSISSLADSDRPARSLLQSPDVYDAVCSSLFSPQS 92

Query: 275 GSGNDPLCQWLYETYQSSDP 334
           GSG DP+CQWLYET+QSSDP
Sbjct: 93  GSGPDPICQWLYETFQSSDP 112


>emb|CAN69646.1| hypothetical protein VITISV_022132 [Vitis vinifera]
          Length = 527

 Score =  112 bits (279), Expect = 4e-23
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 2/80 (2%)
 Frame = +2

Query: 101 QSWWESISKARTRIQLLSTILQTPS--VSSLADSDHPARSLLESQESYSTISSFLSNPLS 274
           QSWWESISKAR RI  LS+IL +PS  +SSLADSD PARSLL+S + Y  + S L +P S
Sbjct: 33  QSWWESISKARARILALSSILSSPSPSISSLADSDRPARSLLQSPDVYDAVCSSLFSPQS 92

Query: 275 GSGNDPLCQWLYETYQSSDP 334
           GSG DP+CQWLYET+QSSDP
Sbjct: 93  GSGPDPICQWLYETFQSSDP 112


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