BLASTX nr result
ID: Coptis21_contig00024315
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024315 (654 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28315.3| unnamed protein product [Vitis vinifera] 270 2e-70 ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleop... 269 4e-70 ref|XP_002276509.1| PREDICTED: heterogeneous nuclear ribonucleop... 266 3e-69 ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|2... 264 1e-68 ref|XP_002322827.1| predicted protein [Populus trichocarpa] gi|2... 263 3e-68 >emb|CBI28315.3| unnamed protein product [Vitis vinifera] Length = 434 Score = 270 bits (689), Expect = 2e-70 Identities = 130/184 (70%), Positives = 153/184 (83%) Frame = +1 Query: 52 EETRAGKADEDESQKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSESVGEIIEVRIVK 231 EE DEDES+KHAELL+LPPHGSEVYVGG+ DASE+DL+SF ESVGE+ EVRI+K Sbjct: 29 EEEEEEIEDEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMK 88 Query: 232 GKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRLFIGNVPKSWVK 411 GKDSGENKG+AFVTF++ ELASKAI +LNNTEFKGRKIKCS SQ K+RLFIGNVP+SW + Sbjct: 89 GKDSGENKGFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGE 148 Query: 412 QDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQKMSNPEFKLDNN 591 +D++K +LVKD +NS+ NRGFAFI+YYN ACAEY+RQKM NP+FKLDNN Sbjct: 149 EDIKKVVTEIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNN 208 Query: 592 APTV 603 APTV Sbjct: 209 APTV 212 >ref|XP_002275366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Vitis vinifera] Length = 503 Score = 269 bits (687), Expect = 4e-70 Identities = 128/176 (72%), Positives = 151/176 (85%) Frame = +1 Query: 76 DEDESQKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSESVGEIIEVRIVKGKDSGENK 255 DEDES+KHAELL+LPPHGSEVYVGG+ DASE+DL+SF ESVGE+ EVRI+KGKDSGENK Sbjct: 106 DEDESKKHAELLALPPHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMKGKDSGENK 165 Query: 256 GYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRLFIGNVPKSWVKQDLEKXXX 435 G+AFVTF++ ELASKAI +LNNTEFKGRKIKCS SQ K+RLFIGNVP+SW ++D++K Sbjct: 166 GFAFVTFRNVELASKAIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGEEDIKKVVT 225 Query: 436 XXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQKMSNPEFKLDNNAPTV 603 +LVKD +NS+ NRGFAFI+YYN ACAEY+RQKM NP+FKLDNNAPTV Sbjct: 226 EIGPGVTAVELVKDMKNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNNAPTV 281 >ref|XP_002276509.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q [Vitis vinifera] Length = 490 Score = 266 bits (680), Expect = 3e-69 Identities = 128/195 (65%), Positives = 159/195 (81%), Gaps = 1/195 (0%) Frame = +1 Query: 22 AASQPKSSGDEETRAGKADED-ESQKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSES 198 A +Q GD+E ++ K + D E+++HAELL+LPPHGSEVY+GG+P++ASE+DLR F E Sbjct: 84 ADAQKDPDGDDEIKSAKGEVDNENRRHAELLALPPHGSEVYLGGIPNNASEEDLRGFCEP 143 Query: 199 VGEIIEVRIVKGKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNRL 378 VGE+ EVRI+KGKDS E KGYAFVTF++KELASKA+ +LNN E KGRKIKCSASQVK+RL Sbjct: 144 VGEVTEVRILKGKDSAETKGYAFVTFRTKELASKAMEELNNAEIKGRKIKCSASQVKHRL 203 Query: 379 FIGNVPKSWVKQDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQK 558 FI NVP++W ++D++K DL KDPQNS+RNRGFAFIEYYN ACAEY+R+K Sbjct: 204 FISNVPRTWEEEDMKKVVTEIGPGVNLVDLWKDPQNSSRNRGFAFIEYYNHACAEYSRKK 263 Query: 559 MSNPEFKLDNNAPTV 603 MSNP+FKLDNNA TV Sbjct: 264 MSNPKFKLDNNASTV 278 >ref|XP_002308472.1| predicted protein [Populus trichocarpa] gi|222854448|gb|EEE91995.1| predicted protein [Populus trichocarpa] Length = 440 Score = 264 bits (674), Expect = 1e-68 Identities = 126/196 (64%), Positives = 157/196 (80%) Frame = +1 Query: 16 DGAASQPKSSGDEETRAGKADEDESQKHAELLSLPPHGSEVYVGGVPHDASEDDLRSFSE 195 D A S S GDEE EDE +KH+ELL+LPPHGSEVY+GG+P DASE+DL+ F E Sbjct: 37 DEADSPKGSDGDEE-------EDEHRKHSELLALPPHGSEVYLGGIPPDASEEDLKEFCE 89 Query: 196 SVGEIIEVRIVKGKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVKNR 375 S+GE+ E+RI+KGKDS E+KGYAFVTF++KELASKAI +LNNTEFKG+K+KCS SQ +R Sbjct: 90 SIGEVTEIRIMKGKDSSESKGYAFVTFRTKELASKAIEELNNTEFKGKKVKCSTSQANHR 149 Query: 376 LFIGNVPKSWVKQDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYARQ 555 LFIGNVP++W ++D++K +L+KDPQN +RNRGFAFIEYYN ACAEY+R+ Sbjct: 150 LFIGNVPRNWGEEDMKKAVKKTGPGVNSVELLKDPQNPSRNRGFAFIEYYNHACAEYSRK 209 Query: 556 KMSNPEFKLDNNAPTV 603 MS+PEFKLD+NAPTV Sbjct: 210 MMSSPEFKLDDNAPTV 225 >ref|XP_002322827.1| predicted protein [Populus trichocarpa] gi|222867457|gb|EEF04588.1| predicted protein [Populus trichocarpa] Length = 427 Score = 263 bits (671), Expect = 3e-68 Identities = 126/198 (63%), Positives = 158/198 (79%) Frame = +1 Query: 10 SVDGAASQPKSSGDEETRAGKADEDESQKHAELLSLPPHGSEVYVGGVPHDASEDDLRSF 189 + D A S+ S G+EE DE +KHAELL+LPPHGSEVY+GG+P DASE DL+ F Sbjct: 56 AADEADSKKGSDGEEEI-------DEQRKHAELLALPPHGSEVYLGGIPPDASEGDLKEF 108 Query: 190 SESVGEIIEVRIVKGKDSGENKGYAFVTFKSKELASKAIRDLNNTEFKGRKIKCSASQVK 369 ES+GE+ EVRI+KGKDS E+KGYAFV+F++KELASKAI +LNNTEFKG+K+KCS SQ Sbjct: 109 CESIGEVTEVRIMKGKDSSESKGYAFVSFRTKELASKAIEELNNTEFKGKKVKCSTSQAN 168 Query: 370 NRLFIGNVPKSWVKQDLEKXXXXXXXXXXXXDLVKDPQNSNRNRGFAFIEYYNRACAEYA 549 +RLFIGNVP++W +++++K +L+KDPQN +RNRGFAFIEYYN ACAEY+ Sbjct: 169 HRLFIGNVPRNWGEENMKKAVKKIGPGVNSVELLKDPQNPSRNRGFAFIEYYNHACAEYS 228 Query: 550 RQKMSNPEFKLDNNAPTV 603 R+KMSNPEFKLD+NAPTV Sbjct: 229 RKKMSNPEFKLDDNAPTV 246