BLASTX nr result

ID: Coptis21_contig00024314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024314
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285229.1| PREDICTED: uncharacterized membrane protein ...   100   9e-20
ref|XP_003540188.1| PREDICTED: uncharacterized membrane protein ...    91   1e-16
ref|XP_003543477.1| PREDICTED: uncharacterized membrane protein ...    86   3e-15
ref|XP_002529937.1| UDP-glucuronic acid/UDP-N-acetylgalactosamin...    85   5e-15
ref|XP_003597262.1| Membrane protein, putative [Medicago truncat...    82   6e-14

>ref|XP_002285229.1| PREDICTED: uncharacterized membrane protein At1g06890 [Vitis
           vinifera] gi|297746270|emb|CBI16326.3| unnamed protein
           product [Vitis vinifera]
          Length = 348

 Score =  100 bits (250), Expect = 9e-20
 Identities = 51/74 (68%), Positives = 57/74 (77%)
 Frame = +3

Query: 3   NIVGILIAIFGMGLYSYFCTHENKKKQSSDSLTASQIKEREATPLLASKILSHQDKENHE 182
           NI+GILIAI GMGLYSYFCTHENKKKQ  D  T SQIK+RE  PLLA K + ++DKE+HE
Sbjct: 279 NIIGILIAILGMGLYSYFCTHENKKKQLGDLSTVSQIKDRETAPLLAGKNMGYEDKESHE 338

Query: 183 VKKINGTINKDSLV 224
           VKK      KDSLV
Sbjct: 339 VKK----ATKDSLV 348


>ref|XP_003540188.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine
           max]
          Length = 349

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/75 (60%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   NIVGILIAIFGMGLYSYFCTHENKKKQ-SSDSLTASQIKEREATPLLASKILSHQDKENH 179
           NI+GILIA+FGMGLYSYFCT ENKKKQ +SD   ASQ+K++++ PLLA K + +Q++ENH
Sbjct: 279 NILGILIAVFGMGLYSYFCTEENKKKQLASDLPLASQVKDKDSLPLLAGKNVGNQNEENH 338

Query: 180 EVKKINGTINKDSLV 224
           E KK    ++KDS++
Sbjct: 339 ETKK----LSKDSVI 349


>ref|XP_003543477.1| PREDICTED: uncharacterized membrane protein At1g06890-like [Glycine
           max]
          Length = 349

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/75 (56%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
 Frame = +3

Query: 3   NIVGILIAIFGMGLYSYFCTHENKKKQ-SSDSLTASQIKEREATPLLASKILSHQDKENH 179
           NI+GILIA+FGMGLYSYFCT +NKKKQ + D   ASQ+K++++ PLLA K + +Q++ENH
Sbjct: 279 NILGILIAVFGMGLYSYFCTEDNKKKQLAGDLPLASQVKDKDSLPLLAGKNVGNQNEENH 338

Query: 180 EVKKINGTINKDSLV 224
           E  K    ++KDS++
Sbjct: 339 ETNK----LSKDSVI 349


>ref|XP_002529937.1| UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative
           [Ricinus communis] gi|223530567|gb|EEF32445.1|
           UDP-glucuronic acid/UDP-N-acetylgalactosamine
           transporter, putative [Ricinus communis]
          Length = 343

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/74 (62%), Positives = 53/74 (71%)
 Frame = +3

Query: 3   NIVGILIAIFGMGLYSYFCTHENKKKQSSDSLTASQIKEREATPLLASKILSHQDKENHE 182
           NI+GIL+AIFGMGLYSYFCT ENKKK S D  +  Q+KE+++TPLLA      QDKE HE
Sbjct: 279 NIIGILVAIFGMGLYSYFCTQENKKKHSVDLSSVPQMKEKDSTPLLAM-----QDKETHE 333

Query: 183 VKKINGTINKDSLV 224
            KK      KDSLV
Sbjct: 334 AKK----SAKDSLV 343


>ref|XP_003597262.1| Membrane protein, putative [Medicago truncatula]
           gi|355486310|gb|AES67513.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 354

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 39/66 (59%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
 Frame = +3

Query: 3   NIVGILIAIFGMGLYSYFCTHENKKKQSSDSLT-ASQIKEREATPLLASKILSHQDKENH 179
           NI+GILIAIFGM LYSYFC  ENKKKQ    L+ ASQ+K+++++PLL  K + +Q++ENH
Sbjct: 284 NIIGILIAIFGMVLYSYFCLEENKKKQLLGDLSLASQVKDKDSSPLLVGKNMDNQEEENH 343

Query: 180 EVKKIN 197
           E KK +
Sbjct: 344 EAKKFS 349


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