BLASTX nr result

ID: Coptis21_contig00024295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024295
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN09155.1| Polynucleotidyl transferase, Ribonuclease H fold ...    57   2e-06
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    57   2e-06

>gb|ABN09155.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 99

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
 Frame = -2

Query: 229 VEYASQRGWNHLWVESDSAAAIHAFSGSQ-IPWWMQQRWEICKKNLSYCN*L-TPT*RES 56
           +E A QRG++ LW+E+DS  A+ AF  S  IPW ++ RW+ C + +S    L T   RE 
Sbjct: 4   IEIAKQRGYSRLWIETDSKLAVLAFKSSNLIPWKIRNRWDNCMEYISNIAFLITHIYREG 63

Query: 55  NFTADQVAKHSVSLQS 8
           N  AD+ A   +SL S
Sbjct: 64  NVCADKFANIGLSLNS 79


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
 Frame = -2

Query: 253 ECLAILEGVEYASQRGWNHLWVESDSAAAIHAFSG-SQIPWWMQQRWEICKKNLSYCN-* 80
           E  AI+  VE A QR W ++W+ESDSA  + AF   S IP  ++ RW  C+K L   N  
Sbjct: 276 ELAAIMRVVEIAYQRNWRNIWIESDSALVVMAFKKMSMIPCRLRNRWINCRKLLCRMNFV 335

Query: 79  LTPT*RESNFTADQVAKHSVSLQ 11
           +T   RE N  AD++A   + ++
Sbjct: 336 ITHIYREDNRCADKLASKGLDIE 358


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