BLASTX nr result
ID: Coptis21_contig00024284
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024284 (407 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308213.1| predicted protein [Populus trichocarpa] gi|2... 80 1e-13 ref|XP_002322967.1| predicted protein [Populus trichocarpa] gi|2... 76 2e-12 ref|XP_002274086.1| PREDICTED: uncharacterized protein LOC100254... 75 6e-12 ref|XP_004137733.1| PREDICTED: uncharacterized protein LOC101216... 64 2e-08 ref|XP_003530261.1| PREDICTED: uncharacterized protein LOC100804... 62 4e-08 >ref|XP_002308213.1| predicted protein [Populus trichocarpa] gi|222854189|gb|EEE91736.1| predicted protein [Populus trichocarpa] Length = 129 Score = 80.5 bits (197), Expect = 1e-13 Identities = 53/114 (46%), Positives = 63/114 (55%) Frame = +2 Query: 65 MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 244 M RK SKRVSFSPD+NDK +F KH GS L+FRLP+TS+ S + Sbjct: 1 MSRKASKRVSFSPDVNDKPTIFLKH--GSGTRVGGNRKKIAGTLTFRLPRTSKFSPA-RL 57 Query: 245 LDSLSTKVARALXXXXXXXXXXXXKVSSPNMGRSRSYTSQVDSHHTEAIEDCIE 406 L SLS KVAR L V+S ++ RSRS VDS EA+EDCIE Sbjct: 58 LRSLSAKVARVL-RFVSMRKESSHNVTSSSLPRSRSLAEAVDSQRAEAMEDCIE 110 >ref|XP_002322967.1| predicted protein [Populus trichocarpa] gi|222867597|gb|EEF04728.1| predicted protein [Populus trichocarpa] Length = 129 Score = 76.3 bits (186), Expect = 2e-12 Identities = 52/114 (45%), Positives = 60/114 (52%) Frame = +2 Query: 65 MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 244 M RK SKR+SFSPD NDK +F KH GS SFRLP+TS+ S + Sbjct: 1 MSRKASKRLSFSPDENDKPTIFLKH--GSGTRVGGSRKKIAGIFSFRLPRTSKFSPA-RL 57 Query: 245 LDSLSTKVARALXXXXXXXXXXXXKVSSPNMGRSRSYTSQVDSHHTEAIEDCIE 406 L L KVAR L KV+S ++ RSRS VDS EAIEDCIE Sbjct: 58 LRRLGAKVARVL-RFVPMGRKSSRKVTSSSLPRSRSLAEAVDSQRAEAIEDCIE 110 >ref|XP_002274086.1| PREDICTED: uncharacterized protein LOC100254499 [Vitis vinifera] gi|147783058|emb|CAN62121.1| hypothetical protein VITISV_037026 [Vitis vinifera] Length = 129 Score = 75.1 bits (183), Expect = 6e-12 Identities = 49/114 (42%), Positives = 60/114 (52%) Frame = +2 Query: 65 MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 244 M ++ SKRVSFSPD+NDK M KH G SFRLP++S S +F Sbjct: 1 MSKRASKRVSFSPDVNDKPTMLLKH--GGCSRASGHRRRVAVIWSFRLPRSSSFSPA-RF 57 Query: 245 LDSLSTKVARALXXXXXXXXXXXXKVSSPNMGRSRSYTSQVDSHHTEAIEDCIE 406 L L +V RAL +VSS ++ RSRS +DSH EAIEDCIE Sbjct: 58 LRRLGDRVVRALRFMSMRRRSSR-RVSSSSLTRSRSLVDPIDSHRAEAIEDCIE 110 >ref|XP_004137733.1| PREDICTED: uncharacterized protein LOC101216064 [Cucumis sativus] gi|449483470|ref|XP_004156601.1| PREDICTED: uncharacterized LOC101216064 [Cucumis sativus] Length = 123 Score = 63.5 bits (153), Expect = 2e-08 Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 1/115 (0%) Frame = +2 Query: 65 MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 244 M RK SKRVSFSPD+NDK + KH G SF L + +R + +F Sbjct: 1 MSRKASKRVSFSPDVNDKPTVVLKHGGGGDGGAGMW--------SFGLSRETRYLPV-RF 51 Query: 245 LDSLSTKVARALXXXXXXXXXXXXKVSSPN-MGRSRSYTSQVDSHHTEAIEDCIE 406 L SL +V+ A+ KVSS + RSRS + ++SH EAIEDCIE Sbjct: 52 LQSLKNRVSEAI--RFVSTRKSSRKVSSASTFTRSRSVSDSMESHRAEAIEDCIE 104 >ref|XP_003530261.1| PREDICTED: uncharacterized protein LOC100804764 [Glycine max] Length = 127 Score = 62.4 bits (150), Expect = 4e-08 Identities = 43/117 (36%), Positives = 55/117 (47%), Gaps = 4/117 (3%) Frame = +2 Query: 68 LRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLS----FRLPKTSRLSAM 235 + + SKRV FSPD+NDK +F K+ G ++ FR + LS Sbjct: 1 MSRKSKRVCFSPDVNDKPTLFLKYNGGGGNDKDNRVSRNGKRVTRPCTFRFSMDTNLSPA 60 Query: 236 NKFLDSLSTKVARALXXXXXXXXXXXXKVSSPNMGRSRSYTSQVDSHHTEAIEDCIE 406 KFL L KVA A+ KVSS + RSRS + DSH E +EDCIE Sbjct: 61 -KFLLQLGEKVASAIRNVSVRRRSSR-KVSSSTLVRSRSLSDLTDSHRAETVEDCIE 115