BLASTX nr result

ID: Coptis21_contig00024284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024284
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308213.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
ref|XP_002322967.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|XP_002274086.1| PREDICTED: uncharacterized protein LOC100254...    75   6e-12
ref|XP_004137733.1| PREDICTED: uncharacterized protein LOC101216...    64   2e-08
ref|XP_003530261.1| PREDICTED: uncharacterized protein LOC100804...    62   4e-08

>ref|XP_002308213.1| predicted protein [Populus trichocarpa] gi|222854189|gb|EEE91736.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 53/114 (46%), Positives = 63/114 (55%)
 Frame = +2

Query: 65  MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 244
           M RK SKRVSFSPD+NDK  +F KH  GS              L+FRLP+TS+ S   + 
Sbjct: 1   MSRKASKRVSFSPDVNDKPTIFLKH--GSGTRVGGNRKKIAGTLTFRLPRTSKFSPA-RL 57

Query: 245 LDSLSTKVARALXXXXXXXXXXXXKVSSPNMGRSRSYTSQVDSHHTEAIEDCIE 406
           L SLS KVAR L             V+S ++ RSRS    VDS   EA+EDCIE
Sbjct: 58  LRSLSAKVARVL-RFVSMRKESSHNVTSSSLPRSRSLAEAVDSQRAEAMEDCIE 110


>ref|XP_002322967.1| predicted protein [Populus trichocarpa] gi|222867597|gb|EEF04728.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 52/114 (45%), Positives = 60/114 (52%)
 Frame = +2

Query: 65  MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 244
           M RK SKR+SFSPD NDK  +F KH  GS               SFRLP+TS+ S   + 
Sbjct: 1   MSRKASKRLSFSPDENDKPTIFLKH--GSGTRVGGSRKKIAGIFSFRLPRTSKFSPA-RL 57

Query: 245 LDSLSTKVARALXXXXXXXXXXXXKVSSPNMGRSRSYTSQVDSHHTEAIEDCIE 406
           L  L  KVAR L            KV+S ++ RSRS    VDS   EAIEDCIE
Sbjct: 58  LRRLGAKVARVL-RFVPMGRKSSRKVTSSSLPRSRSLAEAVDSQRAEAIEDCIE 110


>ref|XP_002274086.1| PREDICTED: uncharacterized protein LOC100254499 [Vitis vinifera]
           gi|147783058|emb|CAN62121.1| hypothetical protein
           VITISV_037026 [Vitis vinifera]
          Length = 129

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 49/114 (42%), Positives = 60/114 (52%)
 Frame = +2

Query: 65  MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 244
           M ++ SKRVSFSPD+NDK  M  KH  G                SFRLP++S  S   +F
Sbjct: 1   MSKRASKRVSFSPDVNDKPTMLLKH--GGCSRASGHRRRVAVIWSFRLPRSSSFSPA-RF 57

Query: 245 LDSLSTKVARALXXXXXXXXXXXXKVSSPNMGRSRSYTSQVDSHHTEAIEDCIE 406
           L  L  +V RAL            +VSS ++ RSRS    +DSH  EAIEDCIE
Sbjct: 58  LRRLGDRVVRALRFMSMRRRSSR-RVSSSSLTRSRSLVDPIDSHRAEAIEDCIE 110


>ref|XP_004137733.1| PREDICTED: uncharacterized protein LOC101216064 [Cucumis sativus]
           gi|449483470|ref|XP_004156601.1| PREDICTED:
           uncharacterized LOC101216064 [Cucumis sativus]
          Length = 123

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 46/115 (40%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
 Frame = +2

Query: 65  MLRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLSFRLPKTSRLSAMNKF 244
           M RK SKRVSFSPD+NDK  +  KH  G                SF L + +R   + +F
Sbjct: 1   MSRKASKRVSFSPDVNDKPTVVLKHGGGGDGGAGMW--------SFGLSRETRYLPV-RF 51

Query: 245 LDSLSTKVARALXXXXXXXXXXXXKVSSPN-MGRSRSYTSQVDSHHTEAIEDCIE 406
           L SL  +V+ A+            KVSS +   RSRS +  ++SH  EAIEDCIE
Sbjct: 52  LQSLKNRVSEAI--RFVSTRKSSRKVSSASTFTRSRSVSDSMESHRAEAIEDCIE 104


>ref|XP_003530261.1| PREDICTED: uncharacterized protein LOC100804764 [Glycine max]
          Length = 127

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 43/117 (36%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
 Frame = +2

Query: 68  LRKNSKRVSFSPDINDKTEMFHKHKNGSXXXXXXXXXXXXXXLS----FRLPKTSRLSAM 235
           + + SKRV FSPD+NDK  +F K+  G               ++    FR    + LS  
Sbjct: 1   MSRKSKRVCFSPDVNDKPTLFLKYNGGGGNDKDNRVSRNGKRVTRPCTFRFSMDTNLSPA 60

Query: 236 NKFLDSLSTKVARALXXXXXXXXXXXXKVSSPNMGRSRSYTSQVDSHHTEAIEDCIE 406
            KFL  L  KVA A+            KVSS  + RSRS +   DSH  E +EDCIE
Sbjct: 61  -KFLLQLGEKVASAIRNVSVRRRSSR-KVSSSTLVRSRSLSDLTDSHRAETVEDCIE 115


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