BLASTX nr result

ID: Coptis21_contig00024281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024281
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282892.1| PREDICTED: uncharacterized protein LOC100267...    82   5e-14
emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]    82   5e-14
ref|XP_002282377.1| PREDICTED: uncharacterized protein LOC100258...    75   4e-12
emb|CAN68213.1| hypothetical protein VITISV_022802 [Vitis vinifera]    75   4e-12
ref|XP_003528295.1| PREDICTED: uncharacterized protein LOC100783...    66   3e-09

>ref|XP_002282892.1| PREDICTED: uncharacterized protein LOC100267740 [Vitis vinifera]
          Length = 734

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
 Frame = +1

Query: 40  IDDGHFADERDGGPGCSLDTRHLPCKRKADGEVSGHLSLDGSRSAHQFSENSVLHA-VPA 216
           +  G+  +E DG  G SL+ R L CKRKA     G  S+ GS S+ Q +EN+V HA VPA
Sbjct: 202 LSGGYLVEENDGRAGSSLEGRRLSCKRKALEGNIGQSSVGGSSSSFQRTENNVWHAVVPA 261

Query: 217 HDNVAN---ISTATESSVAVNHPLPSSPQYGVG-RTYLSSHPPALSITGYAVLPQRNSRV 384
             N  N   IS+ + + +  +     +P+ G+G R   +   P L++ G A    RN R+
Sbjct: 262 RYNAGNGLSISSPSGNIIGASPAEQVNPRLGLGVRGVATDSLPVLNVPGSAESSHRNFRM 321

Query: 385 RVNPVHLQDVTP----SAGNSIR 441
           R+NP H QD  P    SAG S+R
Sbjct: 322 RINPSHQQDSVPHNLFSAGGSVR 344


>emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]
          Length = 1022

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
 Frame = +1

Query: 40  IDDGHFADERDGGPGCSLDTRHLPCKRKADGEVSGHLSLDGSRSAHQFSENSVLHA-VPA 216
           +  G+  +E DG  G SL+ R L CKRKA     G  S+ GS S+ Q +EN+V HA VPA
Sbjct: 202 LSGGYLVEENDGRAGSSLEGRRLSCKRKALEGNIGQSSVGGSSSSFQRTENNVWHAVVPA 261

Query: 217 HDNVAN---ISTATESSVAVNHPLPSSPQYGVG-RTYLSSHPPALSITGYAVLPQRNSRV 384
             N  N   IS+ + + +  +     +P+ G+G R   +   P L++ G A    RN R+
Sbjct: 262 RYNAGNGLSISSPSGNIIGASPAEQVNPRLGLGVRGVATDSLPVLNVPGSAESSHRNFRM 321

Query: 385 RVNPVHLQDVTP----SAGNSIR 441
           R+NP H QD  P    SAG S+R
Sbjct: 322 RINPSHQQDSVPHNLFSAGGSVR 344


>ref|XP_002282377.1| PREDICTED: uncharacterized protein LOC100258840 [Vitis vinifera]
          Length = 734

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
 Frame = +1

Query: 49  GHFADERDGGPGCSLDTRHLPCKRKADGEVSGHLSLDGSRSAHQFSENSVLHAVPAHDNV 228
           G   +E +GG G SL +  L CKRKA    SG     GS S    +E S   AVPAH N 
Sbjct: 203 GSLIEESNGGSGSSLGSWGLSCKRKALEGTSGQSYPSGSSSCSPQAEPSAWLAVPAHSNA 262

Query: 229 AN---ISTATESSVAVNHPLPSSPQYGVGRTYLSSHP--PALSITGYAVLPQRNSRVRVN 393
           +N   IST + +S++VN P   + Q G+G   ++     P+LS+TG A   QRN   RVN
Sbjct: 263 SNSSSISTPSGNSLSVNPPGLPNQQSGIGMRGVAPSDVFPSLSVTGNAENSQRNFGRRVN 322

Query: 394 PVHLQD 411
           P H Q+
Sbjct: 323 PGHQQE 328


>emb|CAN68213.1| hypothetical protein VITISV_022802 [Vitis vinifera]
          Length = 553

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
 Frame = +1

Query: 49  GHFADERDGGPGCSLDTRHLPCKRKADGEVSGHLSLDGSRSAHQFSENSVLHAVPAHDNV 228
           G   +E +GG G SL +  L CKRKA    SG     GS S    +E S   AVPAH N 
Sbjct: 34  GSLIEESNGGSGSSLGSWGLSCKRKALEGTSGQSYPSGSSSCSPQAEPSAWLAVPAHSNA 93

Query: 229 AN---ISTATESSVAVNHPLPSSPQYGVGRTYLSSHP--PALSITGYAVLPQRNSRVRVN 393
           +N   IST + +S++VN P   + Q G+G   ++     P+LS+TG A   QRN   RVN
Sbjct: 94  SNSSSISTPSGNSLSVNPPGLPNQQSGIGMRGVAPSDVFPSLSVTGNAENSQRNFGRRVN 153

Query: 394 PVHLQD 411
           P H Q+
Sbjct: 154 PGHQQE 159


>ref|XP_003528295.1| PREDICTED: uncharacterized protein LOC100783014 [Glycine max]
          Length = 708

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
 Frame = +1

Query: 43  DDGHFADERDGGPGCSLDTRHLPCKRKADGEVSGHLSLDGSRSAHQFSENSVLHAVPAHD 222
           ++G   ++ DG PGCS DTR + CKRKA    +G  S  GS S  Q ++ S  H +P   
Sbjct: 195 NNGFLVEDTDGRPGCSHDTRRVSCKRKAVEGNNGQSSDAGSSSYSQHTDGSAWHTIPTQV 254

Query: 223 NVANISTATESSVAVNHPLPSSPQYGVGRTYLSSHPPALSITGYAVLPQRNSRVRVNPVH 402
           N  + S  + SS  VN  L      G      S + P  +I G +    RN R+R+NP +
Sbjct: 255 NAGSSSRRSISSEQVNARLGLGMGDGA-----SENVPDSNIAGSSESFHRNFRLRLNPSN 309

Query: 403 LQDVTP----SAGNSIR 441
             +  P    S G+ IR
Sbjct: 310 PPNSVPPTAFSTGSMIR 326


Top