BLASTX nr result

ID: Coptis21_contig00024274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024274
         (1440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269263.1| PREDICTED: pathogenesis-related homeodomain ...   295   2e-77
ref|XP_002527803.1| conserved hypothetical protein [Ricinus comm...   273   8e-71
ref|XP_003595073.1| Pathogenesis-related homeodomain protein [Me...   262   1e-67
ref|XP_002309010.1| predicted protein [Populus trichocarpa] gi|2...   260   5e-67
ref|XP_003533738.1| PREDICTED: pathogenesis-related homeodomain ...   260   7e-67

>ref|XP_002269263.1| PREDICTED: pathogenesis-related homeodomain protein [Vitis vinifera]
            gi|296090281|emb|CBI40100.3| unnamed protein product
            [Vitis vinifera]
          Length = 727

 Score =  295 bits (756), Expect = 2e-77
 Identities = 194/472 (41%), Positives = 254/472 (53%), Gaps = 22/472 (4%)
 Frame = +3

Query: 3    WFCKFCECKMEILEAINAHLGTRFSGNSKWQDIFLEAATTTDHEDASLYXXXXXXXXXXX 182
            WFCKFCECKMEILEA+NAHLGTRFS +S WQDIF E A   D   A  Y           
Sbjct: 286  WFCKFCECKMEILEAMNAHLGTRFSVDSTWQDIFKEEAALPDGGSALPYPEEDWPSDDSQ 345

Query: 183  XXXXXXXRNEMSCSFSRMGSEENVSDDASSSGSLYWTSDAEDGLHSERLDGSIEGQFHGD 362
                   RNE SCS S  G+E N SDD +SS SL W+ + E                   
Sbjct: 346  DHDYDPERNENSCSISTAGTEGNASDDTNSSLSLSWSFEDE------------------- 386

Query: 363  KSQIMDSNDIYGVETFISTDSNGSTD-QIAYRRRQRRDVDYKKLHDEMFGKYMVESEEIS 539
               I+  +   G+   IS DS+ ++D +I   RRQRR VDY+KL+DEMFGK    +E++S
Sbjct: 387  ---ILSGSKRSGI---ISADSDETSDCEIISGRRQRRAVDYRKLYDEMFGKDAHANEQVS 440

Query: 540  ADEDWGPGRRKRRRNGSVAAGNRVALCDSDNEFSNVTHRKNVKKSSYNSEGRRKLFRIPP 719
             DEDWGP  ++RR   S AA   + L + + +  NV   +  +K S + + +R   RIP 
Sbjct: 441  EDEDWGPANKRRREKESDAASTLITLYEGEKKLPNVETMEAKQKISSDPQTKRPFSRIPL 500

Query: 720  DAVKKLREVFAEDELPSRVVRENLSKQFGIALEKINKWFKNARYTALKIRK--------- 872
            DAV+KLR+ F E+ELPSR VRENL+KQ G+  EK+NKWFKNARY ALK RK         
Sbjct: 501  DAVEKLRQAFGENELPSRDVRENLAKQLGLDYEKVNKWFKNARYIALKTRKAERAKQLQT 560

Query: 873  -------SSIGAGKIQGADAVASEDDPSLVSLATRVQXXXXXXXXXNSKLVTTPSRKKGE 1031
                   S     K +  D VAS D+ S  SL   ++         N K + T   KK  
Sbjct: 561  SPRISKESRSEIVKDKTVDLVASRDNSS-ASLVRALKNLKKVRRRKNPKPIITSPVKKKH 619

Query: 1032 KSSTVLPTKNSDEVTPWLSKTVSSKKQISSLKRKVALQKKKVNQTCSDNKELPYI----V 1199
                +L +  +D+VT      VS KKQ+  LK K    K++V     D KE   +     
Sbjct: 620  HRRALLESPTNDKVTMEFDDDVSLKKQLKLLKEKSKRDKQRV-----DFKEGTGVQDAEK 674

Query: 1200 EIERICRLKEKIEKMKTVLLTID-NENNDVTDKPGLNKRPVVYVPVAELREK 1352
            E+ER+C++K+KIEK+K V+L +  ++ N   D      + V+YVPVAELREK
Sbjct: 675  EMERLCQIKDKIEKLKQVILRLQCDKTNQWQD------QSVIYVPVAELREK 720


>ref|XP_002527803.1| conserved hypothetical protein [Ricinus communis]
            gi|223532799|gb|EEF34575.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 732

 Score =  273 bits (698), Expect = 8e-71
 Identities = 180/468 (38%), Positives = 253/468 (54%), Gaps = 18/468 (3%)
 Frame = +3

Query: 3    WFCKFCECKMEILEAINAHLGTRFSGNSKWQDIFLEAATTTDHEDASLYXXXXXXXXXXX 182
            W+CKFCEC+MEI+EA+NAHLGT+FS +S WQDIF E AT +D     +            
Sbjct: 291  WYCKFCECRMEIIEAMNAHLGTQFSVDSCWQDIFQEEATFSD--GGGILLNPEEEWPSDD 348

Query: 183  XXXXXXXRNEMSCSFSRMGSEENVSDDASSSGSLYWTSDAEDGLHSERLDGSIEGQFHGD 362
                         S S  G++++ SD+ASS+ SL W+SD E       L GS +      
Sbjct: 349  SEDDDYDPGSQDNSISGAGTDDDASDNASSATSLGWSSDGEV------LSGSRK------ 396

Query: 363  KSQIMDSNDIYGVETFI--STDSNGSTD-QIAYRRRQRRDVDYKKLHDEMFGKYMVESEE 533
                 D  D Y    FI  S DS+ ++D +I   RRQRR VDYKKL+DEMFGK   E E+
Sbjct: 397  ----WDMGDTYFRNQFIYSSLDSDETSDGEIVCGRRQRRAVDYKKLYDEMFGKDAQEHEQ 452

Query: 534  ISADEDWGPGRRKRRRNGSVAAGNRVALCDSDNEFSNVTHRKNVKKSSYNSEGRRKLFRI 713
            +S DEDWGPG+RKRR   S AA   + L +S+         K VKK S + + +R LFRI
Sbjct: 453  VSEDEDWGPGKRKRREKESDAASTLMTLYESEKT------SKKVKKHSRDPQVKRPLFRI 506

Query: 714  PPDAVKKLREVFAEDELPSRVVRENLSKQFGIALEKINKWFKNARYTALKIRKSSIGAGK 893
            PP AV+KLR+VFAE+ELPSR ++ENLSK+ G+   K++KWFKNARY ALK RK+   +  
Sbjct: 507  PPSAVEKLRQVFAENELPSRTIKENLSKELGLEPGKVSKWFKNARYLALKSRKADRTSEL 566

Query: 894  IQGADAVASEDDPSLVSLAT----RVQXXXXXXXXXNSKLVTTPSRKKGEKSSTVLPTKN 1061
               +  +  E     V+  T     ++         + K +    ++K  KS +  P K 
Sbjct: 567  YSSSPEIPREPKLDAVNKITADLAELRATSSETKIYSPKSLKQILQRKESKSMSSSPKKT 626

Query: 1062 SDEVTPWLSKTVSSKKQIS-----------SLKRKVALQKKKVNQTCSDNKELPYIVEIE 1208
            + + TP  ++++S   +IS            LK K    KK+VN       ++    E+E
Sbjct: 627  TLQRTP--TESLSKSNEISVEYSDDLSLKKLLKSKAKRGKKRVNSISRRASQMAE-AEME 683

Query: 1209 RICRLKEKIEKMKTVLLTIDNENNDVTDKPGLNKRPVVYVPVAELREK 1352
            ++CR+K ++E +K  LL + N     T +    +  V+ VP+AELREK
Sbjct: 684  KLCRVKVRLENLKQKLLRLQNGKARKTIRNQWQQESVILVPIAELREK 731


>ref|XP_003595073.1| Pathogenesis-related homeodomain protein [Medicago truncatula]
            gi|355484121|gb|AES65324.1| Pathogenesis-related
            homeodomain protein [Medicago truncatula]
          Length = 707

 Score =  262 bits (670), Expect = 1e-67
 Identities = 179/465 (38%), Positives = 257/465 (55%), Gaps = 14/465 (3%)
 Frame = +3

Query: 3    WFCKFCECKMEILEAINAHLGTRFSGNSKWQDIFLEAATTTDHEDASLYXXXXXXXXXXX 182
            WFCK+C+CK+EILEA NAHLGTRF  +S WQD+F E A   D + A L            
Sbjct: 274  WFCKYCDCKIEILEATNAHLGTRFPLDSTWQDVFKEEAAIPDGDAALLNQEEEWPSDDPE 333

Query: 183  XXXXXXXRNEMSCS-FSRMGSEENVSDDASSSGSLYWTSDAEDGLHSERLDGSIEGQFHG 359
                   R E S   F+  G+++N SDD+SSS S+ W+ + E  L    LD  I  +++ 
Sbjct: 334  DDDYNPERKEESHGGFNTEGNDKNASDDSSSSSSM-WSLNGECSL----LDEGINLEYY- 387

Query: 360  DKSQIMDSNDIYGVETFISTDSNGSTDQIAYRRRQRRDVDYKKLHDEMFGKYMVESEEIS 539
                   SND       I +D +G   +IA  RRQRR VDYKKL+DEMFGK     E++S
Sbjct: 388  -------SND------HIDSDESG---EIACGRRQRRAVDYKKLYDEMFGKDAPPCEQVS 431

Query: 540  ADEDWGPGRRKRRRNGSVAAGNRVALCDSDNEFSNVTHRKNVKKSSYNSEG-RRKLFRIP 716
             DEDWGP +R+RR   S A    + L +S+N++ N    KN  +   NS G +R  FR  
Sbjct: 432  EDEDWGPRKRRRREKESEAVNTLMTLHESENKYPN---NKNNDRIRGNSSGIKRPCFRFS 488

Query: 717  PDAVKKLREVFAEDELPSRVVRENLSKQFGIALEKINKWFKNARYTALKIRKSSIGAGKI 896
             +AV+KLR+VFAE+ELP + V++ LSK+ G+   K+NKWFKNARY ALKIRK   G  ++
Sbjct: 489  HEAVEKLRQVFAENELPPKSVKDALSKELGLDAAKVNKWFKNARYMALKIRKLQEGGQQL 548

Query: 897  QGADAVASEDDPSLVSLATRVQXXXXXXXXXNSKLVTTPSRKKGE--------KSSTVLP 1052
            Q   +  S+D     S +  VQ         ++K+    S KK E        K+S+   
Sbjct: 549  QSITSKTSKD-----STSQHVQ-EDEVLNPKSAKITVISSLKKCENVTGKEKTKASSNPL 602

Query: 1053 TKNSDEVTPWLSKTVS-SKKQIS---SLKRKVALQKKKVNQTCSDNKELPYIVEIERICR 1220
             K   E+ P L +  +    ++S   SL + +  +KKKV+     + E   + E ER+ +
Sbjct: 603  KKKRPEIPPCLGENGNKDSMEVSDDVSLMKLLQDRKKKVSFAFEGDSEAAEL-EFERLSK 661

Query: 1221 LKEKIEKMKTVLLTIDNENNDVTDKPGLNKRPVVYVPVAELREKI 1355
            +K KI+++K  L  + N  +  +D+  LN+  ++YVP+AELREK+
Sbjct: 662  VKTKIDRLKQRLTGVQNCRSKGSDEVHLNEPSIMYVPIAELREKV 706


>ref|XP_002309010.1| predicted protein [Populus trichocarpa] gi|222854986|gb|EEE92533.1|
            predicted protein [Populus trichocarpa]
          Length = 725

 Score =  260 bits (665), Expect = 5e-67
 Identities = 179/473 (37%), Positives = 242/473 (51%), Gaps = 23/473 (4%)
 Frame = +3

Query: 3    WFCKFCECKMEILEAINAHLGTRFSGNSKWQDIFLEAATTTDHEDASLYXXXXXXXXXXX 182
            WFCKFCEC+M+I+EA+NAHLGT FS +S WQDIF E A   D  +  L            
Sbjct: 286  WFCKFCECRMDIIEAMNAHLGTHFSEDSSWQDIFTEEAAIPDAGNVLLNPEEEWPSDDSE 345

Query: 183  XXXXXXXRNEMSCSFSRMGSEENVSDDASSSGSLYWTSDAEDGLHSERLDGSIEGQFHGD 362
                   R +     S  G++++ SDD SSS SL W+SD E  L S R +       HG 
Sbjct: 346  DDNYDPERRDNI--MSEAGTDDDASDDISSSTSLGWSSDGEVFLGSRRWE------MHGL 397

Query: 363  KSQIMDSNDIYGVETFISTDSNGSTD-QIAYRRRQRRDVDYKKLHDEMFGKYMVESEEIS 539
              +   +N IY      S DS+ ++D +I   RRQRR +DYKKL+DE+FGK     E+ S
Sbjct: 398  DFR---NNSIYS-----SLDSDETSDGEIVCGRRQRRAIDYKKLYDEVFGKDAPAHEQAS 449

Query: 540  ADEDWGPGRRKRRRNGSVAAGNRVALCDSDNEFSNVTHRKNVKKSSYNSEG--------R 695
             DEDWGPG+RKRR   S AA   + LC+S          K   KS    EG        R
Sbjct: 450  EDEDWGPGKRKRREKESNAASTLMTLCES----------KKKSKSDETIEGMMNLPPQTR 499

Query: 696  RKLFRIPPDAVKKLREVFAEDELPSRVVRENLSKQFGIALEKINKWFKNARYTALKIRKS 875
            R +FR+PPDAV+KLR+VF E+ELPSR V+ENLSK+ G+   K++KWFKN+RY ALK RK 
Sbjct: 500  RPIFRLPPDAVEKLRQVFVENELPSRTVKENLSKELGLEPGKVSKWFKNSRYLALKSRKV 559

Query: 876  SIGAGKIQGADAVASEDDPSLVSLATR--------------VQXXXXXXXXXNSKLVTTP 1013
              G      +  V++E   +++   T                +           K ++  
Sbjct: 560  EKGEQLHNSSSKVSAEPTLNVMEGKTADLSQDSWEETEVCIPKNLKRILQRKKLKSISRS 619

Query: 1014 SRKKGEKSSTVLPTKNSDEVTPWLSKTVSSKKQISSLKRKVALQKKKVNQTCSDNKELPY 1193
             RK  +K  +      S+E+    S  VS KK    LK K    KKKVN        +  
Sbjct: 620  LRKNEQKRGSYESPTKSNEMNAECSDDVSLKK---LLKAKPKGVKKKVNPI-----SVAA 671

Query: 1194 IVEIERICRLKEKIEKMKTVLLTIDNENNDVTDKPGLNKRPVVYVPVAELREK 1352
              ++ER+CR K  +EKMK  ++ + N     + K    +  +VY+P+AELR K
Sbjct: 672  EYDMERLCRAKAILEKMKQKVVKLQNGKARKSSKTRPLEEFIVYIPIAELRGK 724


>ref|XP_003533738.1| PREDICTED: pathogenesis-related homeodomain protein-like [Glycine
            max]
          Length = 714

 Score =  260 bits (664), Expect = 7e-67
 Identities = 166/461 (36%), Positives = 244/461 (52%), Gaps = 10/461 (2%)
 Frame = +3

Query: 3    WFCKFCECKMEILEAINAHLGTRFSGNSKWQDIFLEAATTTDHEDASLYXXXXXXXXXXX 182
            WFCKFCECK+EILEA NAHLGT+FS +S WQD+F E A+  D + A L            
Sbjct: 281  WFCKFCECKIEILEATNAHLGTQFSLDSTWQDVFKEEASMPDGDIALLNPEEEWPSDDPE 340

Query: 183  XXXXXXXRNEMSCSFSRMGSEENVSDDASSSGSLYWTSDAEDGLHSERLDGSIEGQFHGD 362
                   + E S S    G + N S+D++SS SL W+ + E     E +           
Sbjct: 341  DDDYNPEKKEDSHSIDIEGDDGNASNDSTSSSSL-WSLNGECPPVDEGV----------- 388

Query: 363  KSQIMDSNDIYGVETFISTDSNGSTDQIAYRRRQRRDVDYKKLHDEMFGKYMVESEEISA 542
                  S++ Y V + I ++ +G   +IA   RQR+ VDYKKL+DEMFGK     E++S 
Sbjct: 389  ------SHEYYSVNSCIDSNESG---EIACGPRQRKAVDYKKLYDEMFGKDAPPCEQVSE 439

Query: 543  DEDWGPGRRKRRRNGSVAAGNRVALCDSDNEFSNVTHRKNVKKSSYNSEGRRKLFRIPPD 722
            DEDWGPG+RKRR   S A    + L +S+N+ SN       ++ S   + RR  FRIP D
Sbjct: 440  DEDWGPGKRKRREKESDAVNTLMTLHESENKHSNNEKNDTTREGSSGIQIRRSCFRIPVD 499

Query: 723  AVKKLREVFAEDELPSRVVRENLSKQFGIALEKINKWFKNARYTALKIRKSSIGAGKIQG 902
            AV+KLR+ FAE+ELP R V+++LSK+ G+  EK++KWFKNARY ALK R+      ++Q 
Sbjct: 500  AVEKLRQAFAENELPPRSVKDSLSKELGLDPEKVSKWFKNARYLALKTRRYQSEGEQLQS 559

Query: 903  ADAVASEDDPSLV-----SLATRVQXXXXXXXXXNSKLVTTPSRKKGEKSSTVLPTKNSD 1067
              +  S D  S +      L + V          + K +T   ++K   S ++L  +   
Sbjct: 560  FTSKISTDSISQIVEKDELLKSTVSKITVIHSQKDGKNIT--GKEKNNLSDSLLKKRQQQ 617

Query: 1068 EVTPWLSKTVSSKKQIS-----SLKRKVALQKKKVNQTCSDNKELPYIVEIERICRLKEK 1232
            E+ P L +   +K  +       LK+ +  +K+ VN     + +   + E ER+ ++K K
Sbjct: 618  EIPPPLERENGNKDSMEVSNDVKLKKMLKKRKRGVNIIFEGDSQAAEL-EFERLSKVKRK 676

Query: 1233 IEKMKTVLLTIDNENNDVTDKPGLNKRPVVYVPVAELREKI 1355
            ++ MK  L  + N         G N+  ++YVP A+LREK+
Sbjct: 677  LDSMKQKLNEVQN-----CRAKGSNEPSIIYVPTAQLREKV 712


Top