BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024271
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...   173   6e-41
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   170   5e-40
ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [S...   160   4e-37
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   155   2e-35
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...   152   1e-34

>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score =  173 bits (439), Expect = 6e-41
 Identities = 92/280 (32%), Positives = 144/280 (51%)
 Frame = -2

Query: 1110 DIRCLRHLFNLLKVYQLASGQALNKTKSKIFMGGFTQRRKNKVVYEFGIAEGTLPEKYLG 931
            +IRCL   FN    Y   S Q +N  KS+ + G  T      +    G +   +P  YLG
Sbjct: 170  NIRCLLKFFN---DYSEVSAQIINNNKSQFYAGAMTTSHSQMIAGTLGFSADNIPFFYLG 226

Query: 930  VPLNQKKVTRSLVAPVLDRIQKKLTSWKGSMMSFQGRVILIKSILNSIPVYNMSIYKWPS 751
             P+ + K+       ++DRI+ K   WK +++S  GRV L+KSI++ + VY+  IY WP 
Sbjct: 227  CPIFKGKLKGIYFQSIVDRIKVKFAIWKCTLLSIMGRVELVKSIIHGMLVYSFQIYMWPR 286

Query: 750  SIIREAERTMRNFLWTGDPSRSRATTISWEKVCKPLNEGGLGIRRLRDINSSMLMKLAWR 571
             ++ + +  ++NF+W+GD    +  T+SW+ +C+P   GGL I+    IN S+++ LAW+
Sbjct: 287  RLLHQLDSWIKNFIWSGDIYTHKVCTVSWKVMCRPWAAGGLDIKPTCLINESLILLLAWQ 346

Query: 570  ILTEVDDFATFMKLKYFSRDGDTCQYYKASSIWPGIREALQKVKSRSQWVIGNGVKADLI 391
              T    +A  M  + F + G   Q+Y  SS+W GI+E L  + S S W++G G   +L 
Sbjct: 347  FSTADSQWAALMHHR-FLKHGTPLQHYFLSSMWGGIKEHLSTISSNSIWIVGTGANINLW 405

Query: 390  RDNWXXXXXXXXXXXXXXXXLKGFNAKVNTILVNNIWSIP 271
             DNW                 K F A V  ++VN   S+P
Sbjct: 406  TDNWLGIRLVDSLNISPTLHTK-FRASVADVIVNGALSLP 444


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
            predicted protein [Populus trichocarpa]
          Length = 517

 Score =  170 bits (431), Expect = 5e-40
 Identities = 104/359 (28%), Positives = 170/359 (47%), Gaps = 6/359 (1%)
 Frame = -2

Query: 1080 LLKVYQLASGQALNKTKSKIFMGGFTQRRKNKVVYEFGIAEGTLPEKYLGVPLNQKKVTR 901
            +L  +Q  SG   N  KS IF+ G     + ++++  G  EG LP KYLGVPL   ++  
Sbjct: 11   VLTKFQDLSGLYPNPNKSDIFLSGVLNAEREQIIHILGFREGELPMKYLGVPLLSSRLKA 70

Query: 900  SLVAPVLDRIQKKLTSWKGSMMSFQGRVILIKSILNSIPVYNMSIYKWPSSIIREAERTM 721
                 ++DRI  K+  W    +S+ GRV LI S+L SI VY  S++  P  +I+  E+ M
Sbjct: 71   IYCKGLVDRITSKVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIM 130

Query: 720  RNFLWTGDPSRSRATTISWEKVCKPLNEGGLGIRRLRDINSSMLMKLAWRILTEVDD--F 547
            ++FLW+G   R+    ++W++VC P  EGGLGI+ +++ N   L+K  W +  + D   +
Sbjct: 131  KSFLWSGSDMRTTGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIW 190

Query: 546  ATFMKLKYF-SRDGDTCQY-YKASSIWPGIREALQKVKSRSQWVIGNGVKADLIRDNWXX 373
            +T+++      R+  T +     S  W  I +       + +++IG+G+   L  DNW  
Sbjct: 191  STWIRSNLLRGRNFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHP 250

Query: 372  XXXXXXXXXXXXXXLKGF--NAKVNTILVNNIWSIPPILQNMLDAAGLSIDNVHRGASEQ 199
                            G   NAKVN ++ N+ W  P            +I +       Q
Sbjct: 251  HSPLADSYGERFIYDSGMAKNAKVNVLIQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQ 310

Query: 198  DDYMVWSPDTQGRFTCKSAFDSIRRKANPIGWAKSIWNSHIHPRLAANVWKLIQNCAAT 22
             D +VW      RF+ K A++ +RR    + W   +W  +  PR +  +W  +Q    T
Sbjct: 311  KDELVWLDSPNHRFSVKVAWEQLRRHRQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTT 369


>ref|XP_002440822.1| hypothetical protein SORBIDRAFT_09g007400 [Sorghum bicolor]
            gi|241946107|gb|EES19252.1| hypothetical protein
            SORBIDRAFT_09g007400 [Sorghum bicolor]
          Length = 835

 Score =  160 bits (406), Expect = 4e-37
 Identities = 106/376 (28%), Positives = 180/376 (47%), Gaps = 6/376 (1%)
 Frame = -2

Query: 1110 DIRCLRHLFNLLKVYQLASGQALNKTKSKIFMGGFTQRRKNKVVYEFGIAEGTLPEKYLG 931
            D+   R++  LL +Y+L +G  +N +KS++           K V  F    GT P KYLG
Sbjct: 314  DLVGARNMKLLLYIYELMAGLKINFSKSEVITINDEDNWDRKYVDIFNCQVGTFPIKYLG 373

Query: 930  VPLNQKKVTRSLVAPVLDRIQKKLTSWKGSMMSFQGRVILIKSILNSIPVYNMSIYKWPS 751
            VP++  ++  S  +P++D+  KKL  WKG  MS  GR  LI S LN+ P+Y+MSIY  P 
Sbjct: 374  VPVSPSRLHVSDWSPLIDKSMKKLDIWKGGNMSIAGRSTLISSSLNNAPIYHMSIYLLPK 433

Query: 750  SIIREAERTMRNFLWTGDPSRSRATTISWEKVCKPLNEGGLGIRRLRDINSSMLMKLAWR 571
            S+I   ++  RNF W G  ++ +   I W K+C+   +GG+GI+ +R +N S+L+K  W+
Sbjct: 434  SVIGRLDKIRRNFFWQGGSTKQKYHLIKWTKICRSKKKGGIGIKDIRKMNVSLLIKWWWK 493

Query: 570  ILTEVDDFATFMKLKYFSRDG--DTCQYYKASSIWPGIREALQKVKSRSQWVIGNGVKAD 397
            +  E D +   +K KY   +   D       S+IW  + +         + V+ +G    
Sbjct: 494  LDNEDDVWQKIIKHKYLKSNSILDVSHKQSDSAIWADLLKVKDIYLQGRKKVVRDGKTTF 553

Query: 396  LIRDNWXXXXXXXXXXXXXXXXLKGFNAKVNTILVN--NIWSIPPILQNMLDAAGLSIDN 223
              +D W                 +  N  V+ +  N  NI     ++ N+L      + +
Sbjct: 554  FWKDTWLYEKPLCILYPVLFKFCQQQNILVDQVKDNHQNISFTRCLVDNLLSGWQKILSD 613

Query: 222  VHR-GASEQDDYMVWSPDTQGRFTCKSAFDSIRRKANPIGWAKSIWNSHIHPRLAANVWK 46
            + +   +   D +VW       F+ KS ++++    +    +K IW S I  ++   +W 
Sbjct: 614  MRKVNFTPDHDSVVWKVAIARLFSVKSVYNAMTSDESGPSHSK-IWKSKIPAKIKIFLWL 672

Query: 45   LIQNCAAT-DSLAQKK 1
            L+ N   T D+L ++K
Sbjct: 673  LLNNVILTKDNLIKRK 688


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  155 bits (391), Expect = 2e-35
 Identities = 94/366 (25%), Positives = 174/366 (47%), Gaps = 10/366 (2%)
 Frame = -2

Query: 1116 NGDIRCLRHLFNLLKVYQLASGQALNKTKSKIFMGGFTQRRKNKVVYEFGIAEGTLPEKY 937
            +G IR +  +  +   +   SG  ++  KS +++ G +   +N+V   F  + G LP +Y
Sbjct: 712  DGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRY 771

Query: 936  LGVPLNQKKVTRSLVAPVLDRIQKKLTSWKGSMMSFQGRVILIKSILNSIPVYNMSIYKW 757
            LG+PL  K+++ +   P+L++++K++ SW    +S+ GR+ LI S+L SI  + ++ ++ 
Sbjct: 772  LGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAFRL 831

Query: 756  PSSIIREAERTMRNFLWTGDPSRSRATTISWEKVCKPLNEGGLGIRRLRDINSSMLMKLA 577
            P   IRE E+    FLW+G    S    ISW  VCKP +EGGLG+R L++ N    +KL 
Sbjct: 832  PRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLKLV 891

Query: 576  WRILTEVDDFATFMKLKYFSRDGDTCQYYKASS----IWPGIREALQKVKSRSQWVIGNG 409
            W+I++  +        ++  R+    +  +  S    IW  + +  +  K+ S+  +GNG
Sbjct: 892  WKIVSHSNSLWVKWVDQHLLRNASFWEVKQTVSQGSWIWKKLLKYREVAKTLSKVEVGNG 951

Query: 408  VKADLIRDNWXXXXXXXXXXXXXXXXLKGFNAKVNTILVNNIWSIPPILQNMLDAAGLSI 229
             +     DNW                  G + ++    V   W+     ++  D   +  
Sbjct: 952  KQTSFWYDNWSDLGQLLERTGDRGLIDLGISRRMT---VEEAWTNRRQRRHRNDVYNVIE 1008

Query: 228  DNVHRG---ASEQDDYMVW---SPDTQGRFTCKSAFDSIRRKANPIGWAKSIWNSHIHPR 67
            D + +     +E +D ++W   S   +  F+ +  +   R  +  + W K IW SH  P+
Sbjct: 1009 DALKKSWDTRTETEDKVLWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSHATPK 1068

Query: 66   LAANVW 49
             +   W
Sbjct: 1069 YSFCSW 1074


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score =  152 bits (385), Expect = 1e-34
 Identities = 90/314 (28%), Positives = 150/314 (47%), Gaps = 4/314 (1%)
 Frame = -2

Query: 1068 YQLASGQALNKTKSKIFMGGFTQ-RRKNKVVYEFGIAEGTLPEKYLGVPLNQKKVTRSLV 892
            Y  A+GQ +N  K  I  G  +  + ++ +     IA  +  ++YLG P  + ++ +   
Sbjct: 1409 YASATGQLINPAKCSIMFGESSPPQTRDAIRVTLQIANSSFEDRYLGFPTPEGRMCKGKF 1468

Query: 891  APVLDRIQKKLTSWKGSMMSFQGRVILIKSILNSIPVYNMSIYKWPSSIIREAERTMRNF 712
              + +RI K+L  W  +++S  G+ +LIKS++ +IPVY M I+K P S+  E  +  RNF
Sbjct: 1469 QSLQERIWKRLIIWGENLLSSGGKEVLIKSVIQAIPVYVMGIFKLPESVCEELTKLTRNF 1528

Query: 711  LWTGDPSRSRATTISWEKVCKPLNEGGLGIRRLRDINSSMLMKLAWRILTEVDDF-ATFM 535
             W  +  + +    SWE + +P + GGLG R  R  N ++L + AWR++   D   A  +
Sbjct: 1529 WWGVEKGKRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVL 1588

Query: 534  KLKYFSRDG--DTCQYYKASSIWPGIREALQKVKSRSQWVIGNGVKADLIRDNWXXXXXX 361
            K KYF      DT     AS +W  I   L  +K    W IGNG    + RD W      
Sbjct: 1589 KAKYFPNGSLVDTSFGGNASPVWKAIEYGLSLLKEGIIWRIGNGKSVRIWRDPWLPRDFS 1648

Query: 360  XXXXXXXXXXLKGFNAKVNTILVNNIWSIPPILQNMLDAAGLSIDNVHRGASEQDDYMVW 181
                         + +  + +  N  W    + Q  L     +I ++   + ++DD++ W
Sbjct: 1649 RRPITRKGNCRLKWVS--DLLSENGAWDETRVNQVFLPVDAETICSIRVSSRQEDDFVAW 1706

Query: 180  SPDTQGRFTCKSAF 139
             PD  G+F+ +SA+
Sbjct: 1707 HPDKHGKFSVRSAY 1720



 Score =  128 bits (322), Expect = 2e-27
 Identities = 73/224 (32%), Positives = 114/224 (50%), Gaps = 4/224 (1%)
 Frame = -2

Query: 1068 YQLASGQALNKTKSKIFMGGFTQ-RRKNKVVYEFGIAEGTLPEKYLGVPLNQKKVTRSLV 892
            Y  A+GQ +N  K  I  G  +  + ++ +     IA     ++YLG P  + ++ +   
Sbjct: 711  YASATGQLINPAKCSIMFGESSPPQTRDAIRVTLQIANSGFEDRYLGFPTPEGRMCKGKF 770

Query: 891  APVLDRIQKKLTSWKGSMMSFQGRVILIKSILNSIPVYNMSIYKWPSSIIREAERTMRNF 712
              + +RI K+L  W  +++S  G+ +LIKS++ +IPVY M I+K P S+  E  +  RNF
Sbjct: 771  QSLQERIWKRLIIWGENLLSSGGKEVLIKSVIQAIPVYVMGIFKLPESVCEELTKLTRNF 830

Query: 711  LWTGDPSRSRATTISWEKVCKPLNEGGLGIRRLRDINSSMLMKLAWRILTEVDDF-ATFM 535
             W  +  + +    SWE + +P + GGLG R  R  N ++L + AWR++   D   A  +
Sbjct: 831  WWGVEKGKRKTHWKSWECLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVL 890

Query: 534  KLKYFSRDG--DTCQYYKASSIWPGIREALQKVKSRSQWVIGNG 409
            K KYF      DT     AS +W  I   L  +K    W IGNG
Sbjct: 891  KAKYFPNGSLVDTSFGGNASPVWKAIEYGLSLLKEGIIWRIGNG 934