BLASTX nr result

ID: Coptis21_contig00024268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024268
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302818.1| predicted protein [Populus trichocarpa] gi|2...    61   2e-07
emb|CAN71672.1| hypothetical protein VITISV_044357 [Vitis vinifera]    57   3e-06
ref|XP_002520702.1| conserved hypothetical protein [Ricinus comm...    57   5e-06
ref|XP_002320378.1| predicted protein [Populus trichocarpa] gi|2...    57   5e-06

>ref|XP_002302818.1| predicted protein [Populus trichocarpa] gi|222844544|gb|EEE82091.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
 Frame = -2

Query: 673 LKYVVDVSSFLLVESSADSEEDLDPNVSMDYYNNIIVLADED--DAISCSCESCSPAXXX 500
           +K  VDVSSFLLVE++ DSE D DPN++      II L D+D  DA SCSC++       
Sbjct: 4   MKKSVDVSSFLLVEATGDSEVDSDPNMT------IIDLVDDDDGDAESCSCDT------- 50

Query: 499 XXXXXXXXDYSEEDDEHT-------YEDNHSYNHHDDAESCTTRMEMKLPDHVWNVMLTE 341
                    YSE ++ H         +  H     ++ E      + +   HV+   +  
Sbjct: 51  SYHSCVNGVYSEVEEYHVNYNVVDEEQHQHQQQQQEEEEEEEEEQQQEKGVHVYQSRVDH 110

Query: 340 ------TKKPMEFEVNVREAVPSEEERNRLFWDSCFA 248
                  K+     V+      +E+E N+LFW++C A
Sbjct: 111 GHAGLPVKQKSCVSVDSANESMNEKEENKLFWEACLA 147


>emb|CAN71672.1| hypothetical protein VITISV_044357 [Vitis vinifera]
          Length = 133

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 1/145 (0%)
 Frame = -2

Query: 679 MDLKYVVDVSSFLLVESSADSEE-DLDPNVSMDYYNNIIVLADEDDAISCSCESCSPAXX 503
           M+ + ++DVSSFLL E+S DSE+ + DP +++  +    +  D+DDA SCSC+       
Sbjct: 1   MESRKLMDVSSFLLFEASGDSEQLESDPGMAVSEHG---IDVDKDDAESCSCDLSEGVVQ 57

Query: 502 XXXXXXXXXDYSEEDDEHTYEDNHSYNHHDDAESCTTRMEMKLPDHVWNVMLTETKKPME 323
                       EE++E   ED +            T     +      V LT   +   
Sbjct: 58  VMMIIVMLRRSKEEEEEEEEEDGND----------QTWTSKPVGPQRXAVGLTXGDRKSS 107

Query: 322 FEVNVREAVPSEEERNRLFWDSCFA 248
             V+  E    E E++RLFW++C A
Sbjct: 108 VCVDSTEGEGKEMEKSRLFWEACLA 132


>ref|XP_002520702.1| conserved hypothetical protein [Ricinus communis]
           gi|223540087|gb|EEF41664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 151

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 47/152 (30%), Positives = 61/152 (40%), Gaps = 8/152 (5%)
 Frame = -2

Query: 679 MDLKYVVDVSSFLLVESSADSEEDLDPNVSMDYYNNIIVLADEDDAISCSCE-------- 524
           MD K  VD+SS  LVE+S DSE  LDP       +      D DDA SCSC+        
Sbjct: 12  MDTKKRVDLSSCFLVEASGDSEVGLDPK------DLAAAPDDNDDAESCSCDVSDCYYYY 65

Query: 523 SCSPAXXXXXXXXXXXDYSEEDDEHTYEDNHSYNHHDDAESCTTRMEMKLPDHVWNVMLT 344
           SC               +   D        H     D+ +S  T ++     H+  V   
Sbjct: 66  SCVGDNTNSGEVEEASVHGVTDHNKEQYQEHEDEDEDEVQSYRTWVD----GHINGV--- 118

Query: 343 ETKKPMEFEVNVREAVPSEEERNRLFWDSCFA 248
           +  K     V       +E+ERNRLFW+SC A
Sbjct: 119 QVNKKSCVSVESTSEPMNEKERNRLFWESCLA 150


>ref|XP_002320378.1| predicted protein [Populus trichocarpa] gi|222861151|gb|EEE98693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
 Frame = -2

Query: 673 LKYVVDVSSFLLVESSADSEEDLDPNVSMDYYNNIIVLADEDDAISCSCESCSPAXXXXX 494
           +K  VDVS FLLVE++ DSE D DP +S      I ++ D+DDA SCSC++   +     
Sbjct: 4   VKNSVDVSPFLLVEAAGDSEVDSDPTMS-----TIDLVDDDDDAESCSCDTSDHSCVSDI 58

Query: 493 XXXXXXDYSEEDDEHTYEDNHSYNHHDDAESCTTRMEMKLPDHVWNVML-TETKKPMEFE 317
                       +   Y+ N++    DD E             V +V +    K+     
Sbjct: 59  IKGAC------SEVEAYQVNYNVVDDDDDEEEEEEGVEVCQSWVHHVHVGLPVKQKSCVS 112

Query: 316 VNVREAVPSEEERNRLFWDSCFA 248
           V+      +E+E++RLFW++C A
Sbjct: 113 VDSSNESMNEKEKDRLFWEACLA 135


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