BLASTX nr result
ID: Coptis21_contig00024268
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024268 (752 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002302818.1| predicted protein [Populus trichocarpa] gi|2... 61 2e-07 emb|CAN71672.1| hypothetical protein VITISV_044357 [Vitis vinifera] 57 3e-06 ref|XP_002520702.1| conserved hypothetical protein [Ricinus comm... 57 5e-06 ref|XP_002320378.1| predicted protein [Populus trichocarpa] gi|2... 57 5e-06 >ref|XP_002302818.1| predicted protein [Populus trichocarpa] gi|222844544|gb|EEE82091.1| predicted protein [Populus trichocarpa] Length = 148 Score = 61.2 bits (147), Expect = 2e-07 Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 15/157 (9%) Frame = -2 Query: 673 LKYVVDVSSFLLVESSADSEEDLDPNVSMDYYNNIIVLADED--DAISCSCESCSPAXXX 500 +K VDVSSFLLVE++ DSE D DPN++ II L D+D DA SCSC++ Sbjct: 4 MKKSVDVSSFLLVEATGDSEVDSDPNMT------IIDLVDDDDGDAESCSCDT------- 50 Query: 499 XXXXXXXXDYSEEDDEHT-------YEDNHSYNHHDDAESCTTRMEMKLPDHVWNVMLTE 341 YSE ++ H + H ++ E + + HV+ + Sbjct: 51 SYHSCVNGVYSEVEEYHVNYNVVDEEQHQHQQQQQEEEEEEEEEQQQEKGVHVYQSRVDH 110 Query: 340 ------TKKPMEFEVNVREAVPSEEERNRLFWDSCFA 248 K+ V+ +E+E N+LFW++C A Sbjct: 111 GHAGLPVKQKSCVSVDSANESMNEKEENKLFWEACLA 147 >emb|CAN71672.1| hypothetical protein VITISV_044357 [Vitis vinifera] Length = 133 Score = 57.4 bits (137), Expect = 3e-06 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 1/145 (0%) Frame = -2 Query: 679 MDLKYVVDVSSFLLVESSADSEE-DLDPNVSMDYYNNIIVLADEDDAISCSCESCSPAXX 503 M+ + ++DVSSFLL E+S DSE+ + DP +++ + + D+DDA SCSC+ Sbjct: 1 MESRKLMDVSSFLLFEASGDSEQLESDPGMAVSEHG---IDVDKDDAESCSCDLSEGVVQ 57 Query: 502 XXXXXXXXXDYSEEDDEHTYEDNHSYNHHDDAESCTTRMEMKLPDHVWNVMLTETKKPME 323 EE++E ED + T + V LT + Sbjct: 58 VMMIIVMLRRSKEEEEEEEEEDGND----------QTWTSKPVGPQRXAVGLTXGDRKSS 107 Query: 322 FEVNVREAVPSEEERNRLFWDSCFA 248 V+ E E E++RLFW++C A Sbjct: 108 VCVDSTEGEGKEMEKSRLFWEACLA 132 >ref|XP_002520702.1| conserved hypothetical protein [Ricinus communis] gi|223540087|gb|EEF41664.1| conserved hypothetical protein [Ricinus communis] Length = 151 Score = 56.6 bits (135), Expect = 5e-06 Identities = 47/152 (30%), Positives = 61/152 (40%), Gaps = 8/152 (5%) Frame = -2 Query: 679 MDLKYVVDVSSFLLVESSADSEEDLDPNVSMDYYNNIIVLADEDDAISCSCE-------- 524 MD K VD+SS LVE+S DSE LDP + D DDA SCSC+ Sbjct: 12 MDTKKRVDLSSCFLVEASGDSEVGLDPK------DLAAAPDDNDDAESCSCDVSDCYYYY 65 Query: 523 SCSPAXXXXXXXXXXXDYSEEDDEHTYEDNHSYNHHDDAESCTTRMEMKLPDHVWNVMLT 344 SC + D H D+ +S T ++ H+ V Sbjct: 66 SCVGDNTNSGEVEEASVHGVTDHNKEQYQEHEDEDEDEVQSYRTWVD----GHINGV--- 118 Query: 343 ETKKPMEFEVNVREAVPSEEERNRLFWDSCFA 248 + K V +E+ERNRLFW+SC A Sbjct: 119 QVNKKSCVSVESTSEPMNEKERNRLFWESCLA 150 >ref|XP_002320378.1| predicted protein [Populus trichocarpa] gi|222861151|gb|EEE98693.1| predicted protein [Populus trichocarpa] Length = 136 Score = 56.6 bits (135), Expect = 5e-06 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 1/143 (0%) Frame = -2 Query: 673 LKYVVDVSSFLLVESSADSEEDLDPNVSMDYYNNIIVLADEDDAISCSCESCSPAXXXXX 494 +K VDVS FLLVE++ DSE D DP +S I ++ D+DDA SCSC++ + Sbjct: 4 VKNSVDVSPFLLVEAAGDSEVDSDPTMS-----TIDLVDDDDDAESCSCDTSDHSCVSDI 58 Query: 493 XXXXXXDYSEEDDEHTYEDNHSYNHHDDAESCTTRMEMKLPDHVWNVML-TETKKPMEFE 317 + Y+ N++ DD E V +V + K+ Sbjct: 59 IKGAC------SEVEAYQVNYNVVDDDDDEEEEEEGVEVCQSWVHHVHVGLPVKQKSCVS 112 Query: 316 VNVREAVPSEEERNRLFWDSCFA 248 V+ +E+E++RLFW++C A Sbjct: 113 VDSSNESMNEKEKDRLFWEACLA 135