BLASTX nr result
ID: Coptis21_contig00024259
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024259 (452 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004133834.1| PREDICTED: tubulin gamma-2 chain-like [Cucum... 286 1e-75 ref|XP_002276643.1| PREDICTED: tubulin gamma-1 chain [Vitis vini... 286 1e-75 ref|XP_002320847.1| tubulin gamma-1 chain, at3g61650-like protei... 286 1e-75 ref|XP_002302616.1| tubulin gamma-2 chain [Populus trichocarpa] ... 286 1e-75 gb|AAN87551.1|AF376053_1 gamma-tubulin [Lupinus albus] 282 2e-74 >ref|XP_004133834.1| PREDICTED: tubulin gamma-2 chain-like [Cucumis sativus] gi|449480269|ref|XP_004155846.1| PREDICTED: tubulin gamma-2 chain-like [Cucumis sativus] Length = 474 Score = 286 bits (732), Expect = 1e-75 Identities = 146/146 (100%), Positives = 146/146 (100%) Frame = -3 Query: 450 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG 271 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG Sbjct: 269 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG 328 Query: 270 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH 91 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH Sbjct: 329 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH 388 Query: 90 LFSKCLSQYEKLRKKQAFLDNYRKFP 13 LFSKCLSQYEKLRKKQAFLDNYRKFP Sbjct: 389 LFSKCLSQYEKLRKKQAFLDNYRKFP 414 >ref|XP_002276643.1| PREDICTED: tubulin gamma-1 chain [Vitis vinifera] gi|297745396|emb|CBI40476.3| unnamed protein product [Vitis vinifera] Length = 474 Score = 286 bits (732), Expect = 1e-75 Identities = 146/146 (100%), Positives = 146/146 (100%) Frame = -3 Query: 450 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG 271 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG Sbjct: 269 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG 328 Query: 270 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH 91 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH Sbjct: 329 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH 388 Query: 90 LFSKCLSQYEKLRKKQAFLDNYRKFP 13 LFSKCLSQYEKLRKKQAFLDNYRKFP Sbjct: 389 LFSKCLSQYEKLRKKQAFLDNYRKFP 414 >ref|XP_002320847.1| tubulin gamma-1 chain, at3g61650-like protein [Populus trichocarpa] gi|222861620|gb|EEE99162.1| tubulin gamma-1 chain, at3g61650-like protein [Populus trichocarpa] Length = 474 Score = 286 bits (732), Expect = 1e-75 Identities = 146/146 (100%), Positives = 146/146 (100%) Frame = -3 Query: 450 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG 271 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG Sbjct: 269 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG 328 Query: 270 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH 91 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH Sbjct: 329 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH 388 Query: 90 LFSKCLSQYEKLRKKQAFLDNYRKFP 13 LFSKCLSQYEKLRKKQAFLDNYRKFP Sbjct: 389 LFSKCLSQYEKLRKKQAFLDNYRKFP 414 >ref|XP_002302616.1| tubulin gamma-2 chain [Populus trichocarpa] gi|222844342|gb|EEE81889.1| tubulin gamma-2 chain [Populus trichocarpa] Length = 474 Score = 286 bits (732), Expect = 1e-75 Identities = 146/146 (100%), Positives = 146/146 (100%) Frame = -3 Query: 450 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG 271 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG Sbjct: 269 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG 328 Query: 270 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH 91 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH Sbjct: 329 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH 388 Query: 90 LFSKCLSQYEKLRKKQAFLDNYRKFP 13 LFSKCLSQYEKLRKKQAFLDNYRKFP Sbjct: 389 LFSKCLSQYEKLRKKQAFLDNYRKFP 414 >gb|AAN87551.1|AF376053_1 gamma-tubulin [Lupinus albus] Length = 472 Score = 282 bits (722), Expect = 2e-74 Identities = 142/146 (97%), Positives = 146/146 (100%) Frame = -3 Query: 450 LMTGYTPLTVERQANVIRKTTVLDVMRRLLQTKNIMVSSYARTKEASQAKYISILNIIQG 271 LMTGYTPLTVERQAN+IRKTTVLDVMRRLLQTKN+MVSSYARTK+ASQAKYISILNIIQG Sbjct: 269 LMTGYTPLTVERQANLIRKTTVLDVMRRLLQTKNVMVSSYARTKDASQAKYISILNIIQG 328 Query: 270 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH 91 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH Sbjct: 329 EVDPTQVHESLQRIRERKLVNFIEWGPASIQVALSRKSPYVQTAHRVSGLMLASHTSIRH 388 Query: 90 LFSKCLSQYEKLRKKQAFLDNYRKFP 13 LFS+CLSQYEKLRKKQAFLDNYRKFP Sbjct: 389 LFSRCLSQYEKLRKKQAFLDNYRKFP 414