BLASTX nr result

ID: Coptis21_contig00024256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024256
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001775835.1| predicted protein [Physcomitrella patens sub...   265   4e-69
ref|XP_002529754.1| isoleucyl tRNA synthetase, putative [Ricinus...   261   5e-68
ref|XP_002327957.1| predicted protein [Populus trichocarpa] gi|2...   255   3e-66
ref|NP_192770.2| isoleucyl-tRNA synthetase [Arabidopsis thaliana...   253   9e-66
ref|XP_002263182.1| PREDICTED: isoleucyl-tRNA synthetase, cytopl...   253   9e-66

>ref|XP_001775835.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162672842|gb|EDQ59374.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1175

 Score =  265 bits (676), Expect = 4e-69
 Identities = 117/144 (81%), Positives = 132/144 (91%)
 Frame = +2

Query: 41  MEEVCEGKDYSFPNQEEEILKLWEKISAFETQLKKSESKPEFIFYDGPPFATGLPHYGHL 220
           ME++CEGK+YSFPNQEE+ L+LWE+++AFETQLK++E KPE+IFYDGPPFATGLPHYGH+
Sbjct: 1   MEDICEGKEYSFPNQEEKTLRLWEELNAFETQLKRTEGKPEYIFYDGPPFATGLPHYGHI 60

Query: 221 LAGTIKDIVTRYQTMIGHHVTRRFGWDCHGLPVEHEIDLKLGIKSKDDVFKMGIGNYNEE 400
           LAGTIKDIVTRYQT  GHHVTRRFGWDCHGLPVE+EID KLGIK K DV ++GIGNYNEE
Sbjct: 61  LAGTIKDIVTRYQTATGHHVTRRFGWDCHGLPVEYEIDKKLGIKGKSDVLELGIGNYNEE 120

Query: 401 CRSIVTRYVGEWEKTVKRMGRWID 472
           CRSIV RY  EWEKTV RMGRWID
Sbjct: 121 CRSIVMRYSQEWEKTVTRMGRWID 144


>ref|XP_002529754.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
           gi|223530752|gb|EEF32620.1| isoleucyl tRNA synthetase,
           putative [Ricinus communis]
          Length = 1175

 Score =  261 bits (666), Expect = 5e-68
 Identities = 117/144 (81%), Positives = 129/144 (89%)
 Frame = +2

Query: 41  MEEVCEGKDYSFPNQEEEILKLWEKISAFETQLKKSESKPEFIFYDGPPFATGLPHYGHL 220
           MEEVCEGKD+SFPNQEE+IL  W +I AFETQL ++ES PE+IFYDGPPFATGLPHYGH+
Sbjct: 1   MEEVCEGKDFSFPNQEEKILSFWSEIKAFETQLSRTESLPEYIFYDGPPFATGLPHYGHI 60

Query: 221 LAGTIKDIVTRYQTMIGHHVTRRFGWDCHGLPVEHEIDLKLGIKSKDDVFKMGIGNYNEE 400
           LAGTIKDIVTRYQTM GHHVTRRFGWDCHGLPVE+EID KLGI+ +D+V KMGI  YNEE
Sbjct: 61  LAGTIKDIVTRYQTMRGHHVTRRFGWDCHGLPVENEIDRKLGIQRRDEVLKMGIDKYNEE 120

Query: 401 CRSIVTRYVGEWEKTVKRMGRWID 472
           CRSIVTRYVGEWEK + R GRWID
Sbjct: 121 CRSIVTRYVGEWEKVITRTGRWID 144


>ref|XP_002327957.1| predicted protein [Populus trichocarpa] gi|222837366|gb|EEE75745.1|
           predicted protein [Populus trichocarpa]
          Length = 1028

 Score =  255 bits (651), Expect = 3e-66
 Identities = 114/146 (78%), Positives = 128/146 (87%)
 Frame = +2

Query: 35  STMEEVCEGKDYSFPNQEEEILKLWEKISAFETQLKKSESKPEFIFYDGPPFATGLPHYG 214
           S MEEVCEGK++SFP QEE+IL  W +I AFETQL++++  PE+IFYDGPPFATGLPHYG
Sbjct: 2   SAMEEVCEGKEFSFPTQEEKILSFWSEIKAFETQLERTKDLPEYIFYDGPPFATGLPHYG 61

Query: 215 HLLAGTIKDIVTRYQTMIGHHVTRRFGWDCHGLPVEHEIDLKLGIKSKDDVFKMGIGNYN 394
           H+LAGTIKDIVTRYQTM GHHVTRRFGWDCHGLPVE EID KLGIK +D+V K+GI  YN
Sbjct: 62  HILAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVEAEIDKKLGIKRRDEVLKLGIDKYN 121

Query: 395 EECRSIVTRYVGEWEKTVKRMGRWID 472
           EECR IVTRYVGEWEK V R+GRWID
Sbjct: 122 EECRGIVTRYVGEWEKVVVRVGRWID 147


>ref|NP_192770.2| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
           gi|332657467|gb|AEE82867.1| isoleucyl-tRNA synthetase
           [Arabidopsis thaliana]
          Length = 1190

 Score =  253 bits (647), Expect = 9e-66
 Identities = 112/144 (77%), Positives = 127/144 (88%)
 Frame = +2

Query: 41  MEEVCEGKDYSFPNQEEEILKLWEKISAFETQLKKSESKPEFIFYDGPPFATGLPHYGHL 220
           MEEVCEGK++SFP QEE++L  W +I AF+TQLK++E+ PE+IFYDGPPFATGLPHYGH+
Sbjct: 1   MEEVCEGKEFSFPRQEEDVLSFWTEIDAFKTQLKRTENLPEYIFYDGPPFATGLPHYGHI 60

Query: 221 LAGTIKDIVTRYQTMIGHHVTRRFGWDCHGLPVEHEIDLKLGIKSKDDVFKMGIGNYNEE 400
           LAGTIKDIVTRYQTM GHHVTRRFGWDCHGLPVE+EID KL IK +D+V KMGI  YNEE
Sbjct: 61  LAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVENEIDRKLNIKRRDEVIKMGIDKYNEE 120

Query: 401 CRSIVTRYVGEWEKTVKRMGRWID 472
           CRSIVTRYV EWEK + R GRWID
Sbjct: 121 CRSIVTRYVAEWEKVITRCGRWID 144


>ref|XP_002263182.1| PREDICTED: isoleucyl-tRNA synthetase, cytoplasmic-like [Vitis
           vinifera]
          Length = 1183

 Score =  253 bits (647), Expect = 9e-66
 Identities = 113/144 (78%), Positives = 128/144 (88%)
 Frame = +2

Query: 41  MEEVCEGKDYSFPNQEEEILKLWEKISAFETQLKKSESKPEFIFYDGPPFATGLPHYGHL 220
           MEEV E KD+SFP QEE IL+LW +I AFETQLK++E+ PE++FYDGPPFATGLPHYGH+
Sbjct: 1   MEEVLESKDFSFPKQEENILELWSEIKAFETQLKRTENLPEYVFYDGPPFATGLPHYGHI 60

Query: 221 LAGTIKDIVTRYQTMIGHHVTRRFGWDCHGLPVEHEIDLKLGIKSKDDVFKMGIGNYNEE 400
           LAGTIKDIVTRYQ+M GHHVTRRFGWDCHGLPVEHEID KLGI++++DV KMGI  YNEE
Sbjct: 61  LAGTIKDIVTRYQSMTGHHVTRRFGWDCHGLPVEHEIDKKLGIQTREDVLKMGIDKYNEE 120

Query: 401 CRSIVTRYVGEWEKTVKRMGRWID 472
           CRSIVTRYV EWEK + R GRWID
Sbjct: 121 CRSIVTRYVEEWEKIITRTGRWID 144


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