BLASTX nr result

ID: Coptis21_contig00024254 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024254
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34645.3| unnamed protein product [Vitis vinifera]              134   8e-30
ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253...   134   8e-30
ref|XP_002317032.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_002518969.1| beta-1,3-n-acetylglucosaminyltransferase rad...   123   1e-26
ref|XP_003537924.1| PREDICTED: uncharacterized protein LOC100819...   112   4e-23

>emb|CBI34645.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  134 bits (337), Expect = 8e-30
 Identities = 58/99 (58%), Positives = 78/99 (78%)
 Frame = -2

Query: 442 HRSVCKNPVIFYLNDAWKEGNATAGSYLRAKGSDGLKRRVLCFSRSPPLPHAQNIRVVGY 263
           +RSVCK P++F+L D  +EGNAT GSY RA+G D LKR+V CF +  PL + Q+I+V+GY
Sbjct: 175 YRSVCKKPILFFLKDVGREGNATLGSYERARGKDDLKRKVFCFPQMRPLRYVQHIQVLGY 234

Query: 262 PLSKNWHVVP*RLCCKVNQANEGILTLTVWQCERGAFDT 146
           PLSKNWH+VP RLCC++NQ +  +L LTV QCE+G+F +
Sbjct: 235 PLSKNWHLVPRRLCCRLNQTSSELLKLTVGQCEKGSFSS 273


>ref|XP_002270850.1| PREDICTED: uncharacterized protein LOC100253017 [Vitis vinifera]
          Length = 533

 Score =  134 bits (337), Expect = 8e-30
 Identities = 58/99 (58%), Positives = 78/99 (78%)
 Frame = -2

Query: 442 HRSVCKNPVIFYLNDAWKEGNATAGSYLRAKGSDGLKRRVLCFSRSPPLPHAQNIRVVGY 263
           +RSVCK P++F+L D  +EGNAT GSY RA+G D LKR+V CF +  PL + Q+I+V+GY
Sbjct: 433 YRSVCKKPILFFLKDVGREGNATLGSYERARGKDDLKRKVFCFPQMRPLRYVQHIQVLGY 492

Query: 262 PLSKNWHVVP*RLCCKVNQANEGILTLTVWQCERGAFDT 146
           PLSKNWH+VP RLCC++NQ +  +L LTV QCE+G+F +
Sbjct: 493 PLSKNWHLVPRRLCCRLNQTSSELLKLTVGQCEKGSFSS 531


>ref|XP_002317032.1| predicted protein [Populus trichocarpa] gi|222860097|gb|EEE97644.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  124 bits (311), Expect = 8e-27
 Identities = 51/95 (53%), Positives = 75/95 (78%)
 Frame = -2

Query: 439 RSVCKNPVIFYLNDAWKEGNATAGSYLRAKGSDGLKRRVLCFSRSPPLPHAQNIRVVGYP 260
           +SVCK PV+F+L D  ++GN T G+Y++A+  D LKR   CF+RS PLP+ ++I+V+GYP
Sbjct: 435 KSVCKRPVLFFLEDVERQGNTTLGTYVQARMKDDLKRSFFCFTRSAPLPYVESIQVLGYP 494

Query: 259 LSKNWHVVP*RLCCKVNQANEGILTLTVWQCERGA 155
           L KNWH+ P RLCCK+NQ ++ +LT++V QCE+G+
Sbjct: 495 LKKNWHLSPRRLCCKLNQTSDELLTISVGQCEKGS 529


>ref|XP_002518969.1| beta-1,3-n-acetylglucosaminyltransferase radical fringe, putative
           [Ricinus communis] gi|223541956|gb|EEF43502.1|
           beta-1,3-n-acetylglucosaminyltransferase radical fringe,
           putative [Ricinus communis]
          Length = 538

 Score =  123 bits (309), Expect = 1e-26
 Identities = 50/96 (52%), Positives = 74/96 (77%)
 Frame = -2

Query: 442 HRSVCKNPVIFYLNDAWKEGNATAGSYLRAKGSDGLKRRVLCFSRSPPLPHAQNIRVVGY 263
           H+S+CK P++F+L D  ++GNAT GSY RA+  D  +R+V CF RSPPLP+ +NI+V+G+
Sbjct: 435 HKSICKRPILFFLKDIARQGNATLGSYSRARMKDDFRRKVFCFPRSPPLPYVENIQVLGF 494

Query: 262 PLSKNWHVVP*RLCCKVNQANEGILTLTVWQCERGA 155
             SK WH VP R CCK+N+ ++ +LT++V QCE+G+
Sbjct: 495 SASKKWHWVPRRQCCKLNRTSDELLTISVGQCEKGS 530


>ref|XP_003537924.1| PREDICTED: uncharacterized protein LOC100819814 [Glycine max]
          Length = 545

 Score =  112 bits (279), Expect = 4e-23
 Identities = 50/104 (48%), Positives = 70/104 (67%)
 Frame = -2

Query: 451 RLAHRSVCKNPVIFYLNDAWKEGNATAGSYLRAKGSDGLKRRVLCFSRSPPLPHAQNIRV 272
           R  ++SVCK P  F+L D  +EGNA+ GSY+R +  D  K+R+LCF   PPL +   IRV
Sbjct: 442 REPYKSVCKGPTRFFLKDTGREGNASWGSYVRGRDKDDFKKRILCFPLLPPLRNVGEIRV 501

Query: 271 VGYPLSKNWHVVP*RLCCKVNQANEGILTLTVWQCERGAFDTIF 140
              PLSKNWH VP RLCC+ +QA + IL ++V +C +G F +++
Sbjct: 502 AVQPLSKNWHQVPRRLCCRQSQAGKEILQISVGECGKGTFSSVY 545


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