BLASTX nr result

ID: Coptis21_contig00024228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024228
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18678.3| unnamed protein product [Vitis vinifera]              233   2e-59
ref|XP_002325146.1| predicted protein [Populus trichocarpa] gi|2...   222   5e-56
gb|AFW66253.1| hypothetical protein ZEAMMB73_246886 [Zea mays]        213   3e-53
ref|XP_002308389.1| predicted protein [Populus trichocarpa] gi|2...   210   1e-52
gb|AFW66254.1| hypothetical protein ZEAMMB73_246886 [Zea mays]        210   2e-52

>emb|CBI18678.3| unnamed protein product [Vitis vinifera]
          Length = 756

 Score =  233 bits (595), Expect = 2e-59
 Identities = 112/160 (70%), Positives = 139/160 (86%)
 Frame = -1

Query: 629 HSVNVEKFVLETSKSVIINYLSSPEITFLKSIGGKINKVKTKLIFQFLKGDAVEPTTKQE 450
           + ++V  ++ +T++ + I+Y+SSPEI FLK++   INK KTKLIF+FL  DAVEPTTKQ 
Sbjct: 173 NKLSVSSYIQKTTRFMGISYISSPEIGFLKNMNKIINKAKTKLIFRFLDADAVEPTTKQP 232

Query: 449 YSAILKDLASIKTFASGILVPKEYIWPTNADKYLEAPTSLVSDAHKLGLEVFAAGFANDM 270
           YS+ILKDL+SIK+ ASGILVPKEYIWP + D+YL  P+S+V+DAHK GLEV+A+GFANDM
Sbjct: 233 YSSILKDLSSIKSIASGILVPKEYIWPLSKDQYLLTPSSVVADAHKQGLEVYASGFANDM 292

Query: 269 PGSFNYSYDPTKEYLQFVDNSEFAVDGVLTDFPPTASEAI 150
           PGS+NYSYDPT EYLQFVDNS+F+VDGVLTDFPPTASEAI
Sbjct: 293 PGSYNYSYDPTAEYLQFVDNSDFSVDGVLTDFPPTASEAI 332


>ref|XP_002325146.1| predicted protein [Populus trichocarpa] gi|222866580|gb|EEF03711.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  222 bits (565), Expect = 5e-56
 Identities = 104/163 (63%), Positives = 133/163 (81%)
 Frame = -1

Query: 629 HSVNVEKFVLETSKSVIINYLSSPEITFLKSIGGKINKVKTKLIFQFLKGDAVEPTTKQE 450
           + ++V  ++ + ++   +NY+SSPEI FLK I G +NK KTKL+F FL  +A EPTTKQ 
Sbjct: 174 NKLSVANYIQKATRLQGVNYISSPEIGFLKKINGLVNKAKTKLVFVFLDKNATEPTTKQT 233

Query: 449 YSAILKDLASIKTFASGILVPKEYIWPTNADKYLEAPTSLVSDAHKLGLEVFAAGFANDM 270
           Y +IL +LA+IK FASGI+VPK+YIWP NA  YLEAPTSLV+DAHKLGLEV+A+GFAND 
Sbjct: 234 YGSILGNLATIKAFASGIVVPKDYIWPVNAANYLEAPTSLVNDAHKLGLEVYASGFANDF 293

Query: 269 PGSFNYSYDPTKEYLQFVDNSEFAVDGVLTDFPPTASEAIGEF 141
             S+NYSYDP+ EYLQF+DNS+F+VDG++TDFPPTASEA+  F
Sbjct: 294 TTSYNYSYDPSAEYLQFIDNSQFSVDGLITDFPPTASEAVACF 336


>gb|AFW66253.1| hypothetical protein ZEAMMB73_246886 [Zea mays]
          Length = 331

 Score =  213 bits (541), Expect = 3e-53
 Identities = 100/162 (61%), Positives = 125/162 (77%)
 Frame = -1

Query: 629 HSVNVEKFVLETSKSVIINYLSSPEITFLKSIGGKINKVKTKLIFQFLKGDAVEPTTKQE 450
           H ++ E ++LE  K   + Y+SSPEI FLKS+ GK+   KTKLIF+FL  D  EP+TK+ 
Sbjct: 159 HKLSSEDYILELPKDFSLTYISSPEIGFLKSLSGKLRNAKTKLIFRFLNEDVEEPSTKKT 218

Query: 449 YSAILKDLASIKTFASGILVPKEYIWPTNADKYLEAPTSLVSDAHKLGLEVFAAGFANDM 270
           Y  +LKDL SIK FA+G+LVPK YIWP   D+YL   TSLV DAH LGLEV+A+GFAND+
Sbjct: 219 YGELLKDLKSIKEFAAGVLVPKTYIWPLKKDQYLAPSTSLVKDAHALGLEVYASGFANDI 278

Query: 269 PGSFNYSYDPTKEYLQFVDNSEFAVDGVLTDFPPTASEAIGE 144
             S+NYSYDPT EYLQF+DN +F+VDGV+TDFPPTAS A+G+
Sbjct: 279 ILSYNYSYDPTAEYLQFIDNPDFSVDGVITDFPPTASGAVGK 320


>ref|XP_002308389.1| predicted protein [Populus trichocarpa] gi|222854365|gb|EEE91912.1|
           predicted protein [Populus trichocarpa]
          Length = 731

 Score =  210 bits (535), Expect = 1e-52
 Identities = 98/162 (60%), Positives = 129/162 (79%)
 Frame = -1

Query: 629 HSVNVEKFVLETSKSVIINYLSSPEITFLKSIGGKINKVKTKLIFQFLKGDAVEPTTKQE 450
           + ++V  ++ + ++   +NY+SSPEI FLK + G +NK KT LIF FL   A EPT+ Q 
Sbjct: 174 NKLSVTNYIQKATRLQGVNYISSPEIGFLKRMNGLVNKAKTMLIFVFLDKKATEPTSSQT 233

Query: 449 YSAILKDLASIKTFASGILVPKEYIWPTNADKYLEAPTSLVSDAHKLGLEVFAAGFANDM 270
           Y +IL +LA+IK FASGI+VPK+YIW  N   YL+APTSLV+DAHKLGLEV+A+GFAND 
Sbjct: 234 YGSILGNLATIKKFASGIVVPKDYIWTVNTANYLDAPTSLVNDAHKLGLEVYASGFANDF 293

Query: 269 PGSFNYSYDPTKEYLQFVDNSEFAVDGVLTDFPPTASEAIGE 144
             S+NYSYDP+ EYLQF+DNS+F+VDG++TDFPPTASEA+G+
Sbjct: 294 TTSYNYSYDPSAEYLQFIDNSQFSVDGLITDFPPTASEAVGQ 335


>gb|AFW66254.1| hypothetical protein ZEAMMB73_246886 [Zea mays]
          Length = 755

 Score =  210 bits (534), Expect = 2e-52
 Identities = 99/160 (61%), Positives = 123/160 (76%)
 Frame = -1

Query: 629 HSVNVEKFVLETSKSVIINYLSSPEITFLKSIGGKINKVKTKLIFQFLKGDAVEPTTKQE 450
           H ++ E ++LE  K   + Y+SSPEI FLKS+ GK+   KTKLIF+FL  D  EP+TK+ 
Sbjct: 179 HKLSSEDYILELPKDFSLTYISSPEIGFLKSLSGKLRNAKTKLIFRFLNEDVEEPSTKKT 238

Query: 449 YSAILKDLASIKTFASGILVPKEYIWPTNADKYLEAPTSLVSDAHKLGLEVFAAGFANDM 270
           Y  +LKDL SIK FA+G+LVPK YIWP   D+YL   TSLV DAH LGLEV+A+GFAND+
Sbjct: 239 YGELLKDLKSIKEFAAGVLVPKTYIWPLKKDQYLAPSTSLVKDAHALGLEVYASGFANDI 298

Query: 269 PGSFNYSYDPTKEYLQFVDNSEFAVDGVLTDFPPTASEAI 150
             S+NYSYDPT EYLQF+DN +F+VDGV+TDFPPTAS A+
Sbjct: 299 ILSYNYSYDPTAEYLQFIDNPDFSVDGVITDFPPTASGAV 338


Top