BLASTX nr result

ID: Coptis21_contig00024219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024219
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21527.3| unnamed protein product [Vitis vinifera]              158   5e-37
ref|XP_002275767.1| PREDICTED: uncharacterized protein LOC100254...   158   5e-37
ref|XP_002530261.1| conserved hypothetical protein [Ricinus comm...   148   5e-34
ref|XP_002310040.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
ref|XP_002306358.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32

>emb|CBI21527.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/108 (73%), Positives = 96/108 (88%), Gaps = 1/108 (0%)
 Frame = -3

Query: 322 MEEDKDTQSEDSD-DEMYLKILEKNPRDVETLKVVLSRKMMKGKRKEAVEYVERLIEIEP 146
           +E+ +D Q  +S+ D+MY KILEK+PR+VE LKVVL  KM +GK KEAVEYVERLI+IEP
Sbjct: 14  VEQKRDAQDSESEHDDMYAKILEKDPRNVEALKVVLYGKMRRGKTKEAVEYVERLIDIEP 73

Query: 145 NEVEWRLLQALSYEMLGNLSKAKRLFKDILEERPLLLRALHGLAMAMH 2
           +EVEWRLLQALSYE++G+LSKAKRLFK+IL+ERPLLLRALHGLA+ MH
Sbjct: 74  DEVEWRLLQALSYEIMGHLSKAKRLFKEILKERPLLLRALHGLALVMH 121


>ref|XP_002275767.1| PREDICTED: uncharacterized protein LOC100254208 [Vitis vinifera]
          Length = 345

 Score =  158 bits (399), Expect = 5e-37
 Identities = 79/108 (73%), Positives = 96/108 (88%), Gaps = 1/108 (0%)
 Frame = -3

Query: 322 MEEDKDTQSEDSD-DEMYLKILEKNPRDVETLKVVLSRKMMKGKRKEAVEYVERLIEIEP 146
           +E+ +D Q  +S+ D+MY KILEK+PR+VE LKVVL  KM +GK KEAVEYVERLI+IEP
Sbjct: 107 VEQKRDAQDSESEHDDMYAKILEKDPRNVEALKVVLYGKMRRGKTKEAVEYVERLIDIEP 166

Query: 145 NEVEWRLLQALSYEMLGNLSKAKRLFKDILEERPLLLRALHGLAMAMH 2
           +EVEWRLLQALSYE++G+LSKAKRLFK+IL+ERPLLLRALHGLA+ MH
Sbjct: 167 DEVEWRLLQALSYEIMGHLSKAKRLFKEILKERPLLLRALHGLALVMH 214


>ref|XP_002530261.1| conserved hypothetical protein [Ricinus communis]
           gi|223530227|gb|EEF32131.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 352

 Score =  148 bits (373), Expect = 5e-34
 Identities = 75/107 (70%), Positives = 92/107 (85%), Gaps = 1/107 (0%)
 Frame = -3

Query: 319 EEDKDTQSEDSDDE-MYLKILEKNPRDVETLKVVLSRKMMKGKRKEAVEYVERLIEIEPN 143
           EE +DTQ ++++DE MY K LEK PR++E LKVV+  K+ KGK KEA++YVERLI+ EP+
Sbjct: 116 EEMRDTQMKNNEDEEMYEKFLEKEPRNMEALKVVVYGKIRKGKTKEALKYVERLIKTEPD 175

Query: 142 EVEWRLLQALSYEMLGNLSKAKRLFKDILEERPLLLRALHGLAMAMH 2
           EVEWRLL+AL +EM+G LSKAKRLFK+ILEERPLLLRALHGLAM MH
Sbjct: 176 EVEWRLLEALCWEMMGQLSKAKRLFKEILEERPLLLRALHGLAMVMH 222


>ref|XP_002310040.1| predicted protein [Populus trichocarpa] gi|222852943|gb|EEE90490.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/98 (72%), Positives = 83/98 (84%)
 Frame = -3

Query: 295 EDSDDEMYLKILEKNPRDVETLKVVLSRKMMKGKRKEAVEYVERLIEIEPNEVEWRLLQA 116
           +  D+EMY K+LEK PR+VE LKVVL  KM +G+ KEAV+YV RLIEIEP EVEWRLL+A
Sbjct: 118 KSEDEEMYEKVLEKEPRNVEALKVVLHGKMRRGQTKEAVKYVGRLIEIEPEEVEWRLLEA 177

Query: 115 LSYEMLGNLSKAKRLFKDILEERPLLLRALHGLAMAMH 2
           L YEM+G L+KAKRLF +ILEERPLLLRALHGLA+ MH
Sbjct: 178 LCYEMMGQLNKAKRLFNEILEERPLLLRALHGLALVMH 215


>ref|XP_002306358.1| predicted protein [Populus trichocarpa] gi|222855807|gb|EEE93354.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  143 bits (361), Expect = 1e-32
 Identities = 75/114 (65%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = -3

Query: 340 PSVFETMEEDKDTQSEDSDDE-MYLKILEKNPRDVETLKVVLSRKMMKGKRKEAVEYVER 164
           PSV   +EE +D   E S+DE M+ K+LE  PR+VE LKVV+  KM +G+ KEAV+YVER
Sbjct: 66  PSV--NLEEKRDAHMEKSEDEEMFEKVLEMEPRNVEALKVVVHGKMRRGQTKEAVKYVER 123

Query: 163 LIEIEPNEVEWRLLQALSYEMLGNLSKAKRLFKDILEERPLLLRALHGLAMAMH 2
           LI+IEP +VEWRLL+AL YEM+G LSKAK LFK+IL ERPLLLRALHGLA+ MH
Sbjct: 124 LIDIEPEQVEWRLLEALCYEMMGQLSKAKTLFKEILIERPLLLRALHGLALVMH 177


Top