BLASTX nr result

ID: Coptis21_contig00024217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024217
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522804.1| RALFL33, putative [Ricinus communis] gi|2235...   117   3e-24
ref|XP_003538529.1| PREDICTED: uncharacterized protein LOC100787...   115   9e-24
ref|NP_001241215.1| uncharacterized protein LOC100793523 precurs...   115   9e-24
ref|XP_003632037.1| PREDICTED: uncharacterized protein LOC100250...   113   3e-23
gb|AAR00325.2| rapid alkalinization factor 1 [Solanum chacoense]      112   1e-22

>ref|XP_002522804.1| RALFL33, putative [Ricinus communis] gi|223538042|gb|EEF39655.1|
           RALFL33, putative [Ricinus communis]
          Length = 114

 Score =  117 bits (292), Expect = 3e-24
 Identities = 58/107 (54%), Positives = 76/107 (71%)
 Frame = -1

Query: 544 SICSGFHVLDTTSLNSSGMEVMVKKACAGKLGLCFWETKNEMEIMDVEMDSEINRRVLLM 365
           +IC+G  V   +   ++ ++ ++++ C  K+G CF E          EM+SEI+RRVL+M
Sbjct: 19  TICNGVSV---SGFKNTEVDAIMRRVCTKKIGDCFEEP---------EMESEISRRVLVM 66

Query: 364 QKKYISYETLKRDMVPCDRPGASYYKCHVMGQANPYTRGCEEIAGCR 224
           QKKYISYETLKRDMVPCD+PGASYY CH  G+ANPY+RGCE I  CR
Sbjct: 67  QKKYISYETLKRDMVPCDKPGASYYDCHA-GEANPYSRGCEMITRCR 112


>ref|XP_003538529.1| PREDICTED: uncharacterized protein LOC100787736 [Glycine max]
          Length = 122

 Score =  115 bits (288), Expect = 9e-24
 Identities = 58/108 (53%), Positives = 71/108 (65%)
 Frame = -1

Query: 538 CSGFHVLDTTSLNSSGMEVMVKKACAGKLGLCFWETKNEMEIMDVEMDSEINRRVLLMQK 359
           C+G   +D   LN   ++VM K+ C   +G C       + + + EMDSE NRRVL MQK
Sbjct: 22  CNGLPFVD---LNFHEVDVMTKRVCTKSIGEC-------LSLTEPEMDSETNRRVLAMQK 71

Query: 358 KYISYETLKRDMVPCDRPGASYYKCHVMGQANPYTRGCEEIAGCRNGR 215
           KYISY+TLKRDMVPCDR GASYY CH + +ANPY RGCE I  C  G+
Sbjct: 72  KYISYDTLKRDMVPCDRAGASYYNCHAI-RANPYNRGCEVITACARGQ 118


>ref|NP_001241215.1| uncharacterized protein LOC100793523 precursor [Glycine max]
           gi|255637381|gb|ACU19019.1| unknown [Glycine max]
          Length = 122

 Score =  115 bits (288), Expect = 9e-24
 Identities = 58/108 (53%), Positives = 71/108 (65%)
 Frame = -1

Query: 538 CSGFHVLDTTSLNSSGMEVMVKKACAGKLGLCFWETKNEMEIMDVEMDSEINRRVLLMQK 359
           C+G   +D   LN   ++VM K+ C   +G C       + + + EMDSE NRRVL MQK
Sbjct: 22  CTGLPFVD---LNFHEVDVMTKRVCTKSIGEC-------LSLTEPEMDSETNRRVLAMQK 71

Query: 358 KYISYETLKRDMVPCDRPGASYYKCHVMGQANPYTRGCEEIAGCRNGR 215
           KYISY+TLKRDMVPCDR GASYY CH + +ANPY RGCE I  C  G+
Sbjct: 72  KYISYDTLKRDMVPCDRAGASYYNCHAI-RANPYNRGCEVITACARGQ 118


>ref|XP_003632037.1| PREDICTED: uncharacterized protein LOC100250260 isoform 1 [Vitis
           vinifera] gi|359477877|ref|XP_003632038.1| PREDICTED:
           uncharacterized protein LOC100250260 isoform 2 [Vitis
           vinifera]
          Length = 131

 Score =  113 bits (283), Expect = 3e-23
 Identities = 61/130 (46%), Positives = 77/130 (59%), Gaps = 3/130 (2%)
 Frame = -1

Query: 598 KSPMRNXXXXXXXXXXXLSICSGFHVLDTTSLNS---SGMEVMVKKACAGKLGLCFWETK 428
           ++PM             LSIC+G   +    LNS   + +E + K+ C G++G C  E  
Sbjct: 3   ENPMTTIYLMLLLLHAHLSICNGLVSVSVVGLNSVKNNEIEAIPKRDCGGEVGQCLGEE- 61

Query: 427 NEMEIMDVEMDSEINRRVLLMQKKYISYETLKRDMVPCDRPGASYYKCHVMGQANPYTRG 248
                MD E +   +RRVL+MQKKYISYETLK+DM+PC RPGASYY C   G+ANPY RG
Sbjct: 62  -----MDWEWEIS-SRRVLVMQKKYISYETLKKDMIPCARPGASYYNCRASGEANPYNRG 115

Query: 247 CEEIAGCRNG 218
           CE I GC  G
Sbjct: 116 CEVITGCARG 125


>gb|AAR00325.2| rapid alkalinization factor 1 [Solanum chacoense]
          Length = 152

 Score =  112 bits (279), Expect = 1e-22
 Identities = 59/104 (56%), Positives = 67/104 (64%)
 Frame = -1

Query: 538 CSGFHVLDTTSLNSSGMEVMVKKACAGKLGLCFWETKNEMEIMDVEMDSEINRRVLLMQK 359
           CSG  VLD  S+  S   +M K+ C+ KL  C     +EM   +  MDSE NRRVLLMQK
Sbjct: 45  CSGVSVLDLKSVKDSNFNLMGKRGCSEKLQEC-----SEMVGEEDLMDSESNRRVLLMQK 99

Query: 358 KYISYETLKRDMVPCDRPGASYYKCHVMGQANPYTRGCEEIAGC 227
           KYISY TLKRD+VPC+ PGASYY C   G AN Y RGCE I  C
Sbjct: 100 KYISYGTLKRDLVPCNTPGASYYNCKAPGAANNYNRGCEIITRC 143


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