BLASTX nr result

ID: Coptis21_contig00024203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024203
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275544.2| PREDICTED: F-box protein At5g52880-like [Vit...   112   4e-23
emb|CAN77760.1| hypothetical protein VITISV_034908 [Vitis vinifera]   109   3e-22
ref|XP_002513624.1| conserved hypothetical protein [Ricinus comm...   104   9e-21
ref|XP_003535587.1| PREDICTED: uncharacterized protein LOC100789...    81   1e-13
gb|ACU18198.1| unknown [Glycine max]                                   81   1e-13

>ref|XP_002275544.2| PREDICTED: F-box protein At5g52880-like [Vitis vinifera]
           gi|302143746|emb|CBI22607.3| unnamed protein product
           [Vitis vinifera]
          Length = 299

 Score =  112 bits (280), Expect = 4e-23
 Identities = 55/117 (47%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   SAAIDRRLWQSQYELXXXXXXXXXECKGQM-GKPTEKYMSITYNKETMDLLAIDWREAFK 178
           SAA D  LWQ QY +         + KG+  G+  E        ++      +DWR+AFK
Sbjct: 147 SAASDNCLWQLQYAICFGNSEDISKMKGRRDGELVEDKEETKLKEDIATRTGVDWRDAFK 206

Query: 179 QTYIGNSSQRFTSNRGYCSICETIVWLENMKCPNVHHGVKVVNQQMKPILLQQVVEY 349
           + Y G  ++RFTSNRGYC +C TIVWL NMKCP  H GVK  NQQ+KP+  QQ+VEY
Sbjct: 207 RKYKGKRAKRFTSNRGYCGVCHTIVWLSNMKCPKRHPGVKSENQQIKPVSPQQIVEY 263


>emb|CAN77760.1| hypothetical protein VITISV_034908 [Vitis vinifera]
          Length = 299

 Score =  109 bits (273), Expect = 3e-22
 Identities = 54/117 (46%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
 Frame = +2

Query: 2   SAAIDRRLWQSQYELXXXXXXXXXECKGQM-GKPTEKYMSITYNKETMDLLAIDWREAFK 178
           SAA D  LWQ QY +         + KG+  G+  E        ++      +DWR+AFK
Sbjct: 147 SAASDNCLWQLQYAICFGNSEDISKMKGRRDGELVEDKEETXLKEDIATRTGVDWRDAFK 206

Query: 179 QTYIGNSSQRFTSNRGYCSICETIVWLENMKCPNVHHGVKVVNQQMKPILLQQVVEY 349
           + Y G  ++R TSNRGYC +C TIVWL NMKCP  H GVK  NQQ+KP+  QQ+VEY
Sbjct: 207 RKYKGKRAKRXTSNRGYCGVCHTIVWLSNMKCPKRHPGVKSENQQIKPVSPQQIVEY 263


>ref|XP_002513624.1| conserved hypothetical protein [Ricinus communis]
           gi|223547532|gb|EEF49027.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 302

 Score =  104 bits (260), Expect = 9e-21
 Identities = 52/116 (44%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
 Frame = +2

Query: 5   AAIDRRLWQSQYELXXXXXXXXXECKGQMGKPTEKYMSITYNKE-TMDLLAIDWREAFKQ 181
           AA + +LW+SQY +         + +G      +K       +E T+   +IDW+EAFK+
Sbjct: 144 AASNNQLWESQYAIFFSKKPASSKIRGLRNSRQDKDKEFALLQENTVSRTSIDWKEAFKR 203

Query: 182 TYIGNSSQRFTSNRGYCSICETIVWLENMKCPNVHHGVKVVNQQMKPILLQQVVEY 349
            Y+GNSS+R  SNRGYC  CETIVWL+NMKC N  HG++  NQ + P+   QVVEY
Sbjct: 204 AYVGNSSKRLASNRGYCMQCETIVWLDNMKCCNGDHGLESGNQLIVPVSPLQVVEY 259


>ref|XP_003535587.1| PREDICTED: uncharacterized protein LOC100789652 [Glycine max]
          Length = 1045

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 50/149 (33%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
 Frame = +2

Query: 5    AAIDRRLWQSQYELXXXXXXXXXECKGQMGKPTEKYMSITYNKETMDLLAI-DWREAFKQ 181
            AA D  LW+ QY           E     GK     +      E +D   I DW+EA K 
Sbjct: 907  AANDNHLWEMQYVALFGGRAKLVE-----GKNNRLLL------EPIDTRIITDWKEAVKG 955

Query: 182  TYIGNSSQRFTSNRGYCSICETIVWLENMKCPNVHHGVKVVNQQMKPILLQQVVEYXXXX 361
             Y G  S+  T++RGYC  C+++VWL N KCPNVH G+  + Q +KP+   Q VEY    
Sbjct: 956  AYTGALSRILTTSRGYCGHCKSVVWLNNSKCPNVHSGISEI-QDIKPVTAFQAVEYVLED 1014

Query: 362  XXXXXXXXXXXXXXXXXXXXXXWAYAKHL 448
                                  WAY KH+
Sbjct: 1015 SLSVTSSSDSDSDSEGGTVSRLWAYPKHI 1043


>gb|ACU18198.1| unknown [Glycine max]
          Length = 286

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 50/149 (33%), Positives = 65/149 (43%), Gaps = 1/149 (0%)
 Frame = +2

Query: 5   AAIDRRLWQSQYELXXXXXXXXXECKGQMGKPTEKYMSITYNKETMDLLAI-DWREAFKQ 181
           AA D  LW+ QY           E     GK     +      E +D   I DW+EA K 
Sbjct: 148 AANDNHLWEMQYVALFGGRAKLVE-----GKNNRLLL------EPIDTRIITDWKEAVKG 196

Query: 182 TYIGNSSQRFTSNRGYCSICETIVWLENMKCPNVHHGVKVVNQQMKPILLQQVVEYXXXX 361
            Y G  S+  T++RGYC  C+++VWL N KCPNVH G+  + Q +KP+   Q VEY    
Sbjct: 197 AYTGALSRILTTSRGYCGHCKSVVWLNNSKCPNVHSGISEI-QDIKPVTAFQAVEYVLED 255

Query: 362 XXXXXXXXXXXXXXXXXXXXXXWAYAKHL 448
                                 WAY KH+
Sbjct: 256 SLSVTSSSDSDSDSEGGTVFRLWAYPKHI 284


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