BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024194
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago ...    54   5e-06

>gb|ABD32264.2| RNA-directed DNA polymerase , putative [Medicago truncatula]
          Length = 161

 Score = 53.9 bits (128), Expect(2) = 5e-06
 Identities = 20/48 (41%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
 Frame = -1

Query: 315 ILIYKWPSAVIK--EGIMRNFVWTGNPLTKRATTVSWKKWCTPVDEGG 178
           I +Y WP++++K  E  ++NF+W+G+   ++  TV+WKK C P D+GG
Sbjct: 92  ITVYNWPTSLLKDLEKSIKNFIWSGDTSKRKLVTVAWKKLCRPFDQGG 139



 Score = 23.1 bits (48), Expect(2) = 5e-06
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 182 GVRFRRLKELNVVLLMKLVWHI 117
           G+R R L +LN    +KL W+I
Sbjct: 139 GLRIRSLIQLNSASNLKLCWNI 160