BLASTX nr result

ID: Coptis21_contig00024184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024184
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI96983.1| phytocyanin-like arabinogalactan-protein [Gossypi...    95   7e-18
ref|XP_002324335.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_002515421.1| Early nodulin 55-2 precursor, putative [Rici...    83   2e-14
ref|NP_001236959.1| uncharacterized protein LOC100305551 precurs...    82   6e-14
ref|XP_002308708.1| predicted protein [Populus trichocarpa] gi|1...    81   1e-13

>gb|ABI96983.1| phytocyanin-like arabinogalactan-protein [Gossypium hirsutum]
           gi|115393870|gb|ABI96984.1| phytocyanin-like
           arabinogalactan-protein [Gossypium hirsutum]
          Length = 175

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/91 (50%), Positives = 60/91 (65%)
 Frame = +2

Query: 5   YVSCSTKNPIVVYKNATTMIVLDKSGPFYFISGAEGHCEQGQKMIVVVLSEVHTFRQFXX 184
           Y SC+T NPI  YK+  T + L+KSGP++F+SGA+GHCEQGQKMIVVV+S+ H +     
Sbjct: 81  YTSCNTSNPIAEYKDGNTKVKLEKSGPYFFMSGAKGHCEQGQKMIVVVMSQKHRY----- 135

Query: 185 XXXXXXXXXXXXXXXFDGTAVAPTSGVSGLR 277
                          F+G AVAPTSGV+GL+
Sbjct: 136 ----IGISPAPSPVDFEGPAVAPTSGVAGLK 162


>ref|XP_002324335.1| predicted protein [Populus trichocarpa] gi|222865769|gb|EEF02900.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/91 (50%), Positives = 54/91 (59%)
 Frame = +2

Query: 5   YVSCSTKNPIVVYKNATTMIVLDKSGPFYFISGAEGHCEQGQKMIVVVLSEVHTFRQFXX 184
           Y +C+T NPI  YK+  T + LDKSGPFYFISGAEGHCE+GQK++VVVLS+ H       
Sbjct: 116 YAACNTTNPIEEYKDGNTKVKLDKSGPFYFISGAEGHCEKGQKIVVVVLSQKH------- 168

Query: 185 XXXXXXXXXXXXXXXFDGTAVAPTSGVSGLR 277
                          F G AVA TS  S LR
Sbjct: 169 KQVGYVGSPAPSPVEFVGPAVARTSSASNLR 199


>ref|XP_002515421.1| Early nodulin 55-2 precursor, putative [Ricinus communis]
           gi|223545365|gb|EEF46870.1| Early nodulin 55-2
           precursor, putative [Ricinus communis]
          Length = 181

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/91 (45%), Positives = 55/91 (60%)
 Frame = +2

Query: 5   YVSCSTKNPIVVYKNATTMIVLDKSGPFYFISGAEGHCEQGQKMIVVVLSEVHTFRQFXX 184
           Y+SC+  NP+  YK+  T + L+++GP+YFISGAEGHCE+GQKMIVVVLS  H       
Sbjct: 81  YLSCNVSNPVEEYKDGNTKVKLERAGPYYFISGAEGHCEKGQKMIVVVLSPRHN------ 134

Query: 185 XXXXXXXXXXXXXXXFDGTAVAPTSGVSGLR 277
                          F+G A+APTS  + L+
Sbjct: 135 --RFIGISPAPSPAEFEGPAIAPTSTATSLK 163


>ref|NP_001236959.1| uncharacterized protein LOC100305551 precursor [Glycine max]
           gi|255625883|gb|ACU13286.1| unknown [Glycine max]
          Length = 178

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 41/88 (46%), Positives = 52/88 (59%)
 Frame = +2

Query: 5   YVSCSTKNPIVVYKNATTMIVLDKSGPFYFISGAEGHCEQGQKMIVVVLSEVHTFRQFXX 184
           Y +CST NPI  Y +  T + L+  GPFYFISG++GHCE+GQK+IVVV+S  HTF     
Sbjct: 76  YANCSTSNPIKEYNDGNTKVKLEHPGPFYFISGSKGHCEKGQKLIVVVMSPRHTFTAI-- 133

Query: 185 XXXXXXXXXXXXXXXFDGTAVAPTSGVS 268
                          F+G AVAPTS  +
Sbjct: 134 ----ISPAPTPSPAEFEGPAVAPTSSAT 157


>ref|XP_002308708.1| predicted protein [Populus trichocarpa] gi|118484663|gb|ABK94202.1|
           unknown [Populus trichocarpa]
           gi|222854684|gb|EEE92231.1| predicted protein [Populus
           trichocarpa]
          Length = 179

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/91 (47%), Positives = 52/91 (57%)
 Frame = +2

Query: 5   YVSCSTKNPIVVYKNATTMIVLDKSGPFYFISGAEGHCEQGQKMIVVVLSEVHTFRQFXX 184
           Y SC+T +PI  YK+  T + LD+SGPFYFISGAEGHCE+GQK +V+VLS+ H       
Sbjct: 80  YASCNTTSPIEEYKDGNTKVKLDRSGPFYFISGAEGHCEKGQKFVVLVLSQKHRHTGISP 139

Query: 185 XXXXXXXXXXXXXXXFDGTAVAPTSGVSGLR 277
                            G AVAPTS    LR
Sbjct: 140 APSPAEFE--------GGPAVAPTSSAYTLR 162


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