BLASTX nr result

ID: Coptis21_contig00024166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024166
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155511.1| PREDICTED: LOW QUALITY PROTEIN: putative cla...   466   e-129
ref|XP_004137043.1| PREDICTED: LOW QUALITY PROTEIN: putative cla...   466   e-129
ref|XP_002523765.1| clathrin assembly protein, putative [Ricinus...   462   e-128
emb|CBI20038.3| unnamed protein product [Vitis vinifera]              459   e-127
ref|XP_002270803.1| PREDICTED: putative clathrin assembly protei...   459   e-127

>ref|XP_004155511.1| PREDICTED: LOW QUALITY PROTEIN: putative clathrin assembly protein
           At1g03050-like [Cucumis sativus]
          Length = 591

 Score =  466 bits (1199), Expect = e-129
 Identities = 228/323 (70%), Positives = 273/323 (84%), Gaps = 5/323 (1%)
 Frame = -1

Query: 955 PMALRKAIGAVKDQTTISIAKVSNSTSLSDLDVAIVKATRHEEYPADERYIREILSLTCY 776
           P  +R+A+GAVKD+T+I +AKV +STSLSDL+VAIVKATRHEEYPA+ER++REILSLTCY
Sbjct: 3   PSKIRRALGAVKDKTSIGLAKVGSSTSLSDLEVAIVKATRHEEYPAEERHVREILSLTCY 62

Query: 775 SRAHVSSCVNTISRRLNKTRNWTVALKTLMLIHRLLNDGDSAYEQEISFATRRGTRLLNM 596
           SRA++S+CVNT+SRRLNKT+NWTVALKTLMLI RL+++GD AYEQEI F+TRRGTR LNM
Sbjct: 63  SRAYISACVNTLSRRLNKTKNWTVALKTLMLIQRLVSEGDPAYEQEIFFSTRRGTRFLNM 122

Query: 595 SDFRDTSQSGSWDYSAFVRTYALYLDERLEFKMY-----XXXXXXXXXXGDEEDEVGKTA 431
           SDFRDTSQS SWDYSAFVRTYALYLDERLEF+M                 D  DE   + 
Sbjct: 123 SDFRDTSQSNSWDYSAFVRTYALYLDERLEFRMQSRRGRRSAFGEDNNDNDNNDEEDHSK 182

Query: 430 LTVPTGTPVREMKNDKIFTRTQHLQSLLERLLACRPTGDAKNNRVVLVALYPVMKESFQL 251
             +   TP+R+M +++IF+RTQHLQ LLER LACRPTG AKNNRVVLVALYPV++ESFQ+
Sbjct: 183 AIIVRATPMRDMTSEQIFSRTQHLQQLLERFLACRPTGAAKNNRVVLVALYPVVRESFQI 242

Query: 250 YFDITEIMGILVDRFMELEVPDCVKVHEVFIRISKQFDELEHFYSWSKAVGIARSSDYPE 71
           Y+DITEIMGIL+DRFM+L V DCVKV+E+F R+ KQFDELE FYSW + +GIARS++YPE
Sbjct: 243 YYDITEIMGILIDRFMDLNVQDCVKVYEIFCRVGKQFDELEMFYSWCRTIGIARSAEYPE 302

Query: 70  VEKITQKKLEIMDEFIRDKSILA 2
           VEKIT KKLE+MDEFI+D+S LA
Sbjct: 303 VEKITPKKLEVMDEFIKDRSALA 325


>ref|XP_004137043.1| PREDICTED: LOW QUALITY PROTEIN: putative clathrin assembly protein
           At1g03050-like [Cucumis sativus]
          Length = 592

 Score =  466 bits (1199), Expect = e-129
 Identities = 228/323 (70%), Positives = 273/323 (84%), Gaps = 5/323 (1%)
 Frame = -1

Query: 955 PMALRKAIGAVKDQTTISIAKVSNSTSLSDLDVAIVKATRHEEYPADERYIREILSLTCY 776
           P  +R+A+GAVKD+T+I +AKV +STSLSDL+VAIVKATRHEEYPA+ER++REILSLTCY
Sbjct: 3   PSKIRRALGAVKDKTSIGLAKVGSSTSLSDLEVAIVKATRHEEYPAEERHVREILSLTCY 62

Query: 775 SRAHVSSCVNTISRRLNKTRNWTVALKTLMLIHRLLNDGDSAYEQEISFATRRGTRLLNM 596
           SRA++S+CVNT+SRRLNKT+NWTVALKTLMLI RL+++GD AYEQEI F+TRRGTR LNM
Sbjct: 63  SRAYISACVNTLSRRLNKTKNWTVALKTLMLIQRLVSEGDPAYEQEIFFSTRRGTRFLNM 122

Query: 595 SDFRDTSQSGSWDYSAFVRTYALYLDERLEFKMY-----XXXXXXXXXXGDEEDEVGKTA 431
           SDFRDTSQS SWDYSAFVRTYALYLDERLEF+M                 D  DE   + 
Sbjct: 123 SDFRDTSQSNSWDYSAFVRTYALYLDERLEFRMQSRRGRRSAFGEDNNDNDNNDEEDHSK 182

Query: 430 LTVPTGTPVREMKNDKIFTRTQHLQSLLERLLACRPTGDAKNNRVVLVALYPVMKESFQL 251
             +   TP+R+M +++IF+RTQHLQ LLER LACRPTG AKNNRVVLVALYPV++ESFQ+
Sbjct: 183 AIIVRATPMRDMTSEQIFSRTQHLQQLLERFLACRPTGAAKNNRVVLVALYPVVRESFQI 242

Query: 250 YFDITEIMGILVDRFMELEVPDCVKVHEVFIRISKQFDELEHFYSWSKAVGIARSSDYPE 71
           Y+DITEIMGIL+DRFM+L V DCVKV+E+F R+ KQFDELE FYSW + +GIARS++YPE
Sbjct: 243 YYDITEIMGILIDRFMDLNVQDCVKVYEIFCRVGKQFDELEMFYSWCRTIGIARSAEYPE 302

Query: 70  VEKITQKKLEIMDEFIRDKSILA 2
           VEKIT KKLE+MDEFI+D+S LA
Sbjct: 303 VEKITPKKLEVMDEFIKDRSALA 325


>ref|XP_002523765.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223536977|gb|EEF38614.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 578

 Score =  462 bits (1190), Expect = e-128
 Identities = 229/318 (72%), Positives = 268/318 (84%)
 Frame = -1

Query: 955 PMALRKAIGAVKDQTTISIAKVSNSTSLSDLDVAIVKATRHEEYPADERYIREILSLTCY 776
           P  +R+A+GAVKDQT+I +AKV +S SLSDLDVAIVKATRHEEYPA+ER++REILSLT Y
Sbjct: 3   PSKIRRALGAVKDQTSIGLAKVGSSNSLSDLDVAIVKATRHEEYPAEERHVREILSLTSY 62

Query: 775 SRAHVSSCVNTISRRLNKTRNWTVALKTLMLIHRLLNDGDSAYEQEISFATRRGTRLLNM 596
           SRA++S+CVNT+SRRLNKTRNWTVALKTL+LI RLL +GD AYEQEI FATRRGTRLLNM
Sbjct: 63  SRAYISACVNTLSRRLNKTRNWTVALKTLVLIQRLLGEGDPAYEQEIFFATRRGTRLLNM 122

Query: 595 SDFRDTSQSGSWDYSAFVRTYALYLDERLEFKMYXXXXXXXXXXGDEEDEVGKTALTVPT 416
           SDF DTS+S SWDYSAFVRTYALYLDERLE++M            DE++E   T      
Sbjct: 123 SDFCDTSRSNSWDYSAFVRTYALYLDERLEYRMQGRRGRRSAFGIDEDEEA--TGTICVR 180

Query: 415 GTPVREMKNDKIFTRTQHLQSLLERLLACRPTGDAKNNRVVLVALYPVMKESFQLYFDIT 236
            TPVREMK D +F+R QHLQ LLER LACRPTG AK+NRVV+VALYP++KESFQLY+DIT
Sbjct: 181 STPVREMKTDHVFSRIQHLQQLLERFLACRPTGGAKHNRVVIVALYPIVKESFQLYYDIT 240

Query: 235 EIMGILVDRFMELEVPDCVKVHEVFIRISKQFDELEHFYSWSKAVGIARSSDYPEVEKIT 56
           EI+GIL+DRFMELE+ D VKV+++F RISKQF++LE FY W K +GI RSSDYP+VEKIT
Sbjct: 241 EILGILIDRFMELEISDSVKVYDIFCRISKQFEDLESFYGWCKIIGIGRSSDYPDVEKIT 300

Query: 55  QKKLEIMDEFIRDKSILA 2
            KKL++MDEFIRDKS LA
Sbjct: 301 PKKLDLMDEFIRDKSALA 318


>emb|CBI20038.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  459 bits (1182), Expect = e-127
 Identities = 229/319 (71%), Positives = 270/319 (84%), Gaps = 1/319 (0%)
 Frame = -1

Query: 955 PMALRKAIGAVKDQTTISIAKVSNSTSLSDLDVAIVKATRHEEYPADERYIREILSLTCY 776
           P  +R+A+GAVKDQT+I +AKV +S SL+DLDVAIVKATRHEEYPA+ER+IREILSLTCY
Sbjct: 3   PSKIRRALGAVKDQTSIGLAKVGSSNSLADLDVAIVKATRHEEYPAEERHIREILSLTCY 62

Query: 775 SRAHVSSCVNTISRRLNKTRNWTVALKTLMLIHRLLNDGDSAYEQEISFATRRGTRLLNM 596
           SRA VS+CVNT++RRLNKT+NWTVALKTLMLIHRLL DGD +YEQEI F+TRRGTR+LNM
Sbjct: 63  SRAFVSACVNTLARRLNKTKNWTVALKTLMLIHRLLADGDPSYEQEIFFSTRRGTRILNM 122

Query: 595 SDFRD-TSQSGSWDYSAFVRTYALYLDERLEFKMYXXXXXXXXXXGDEEDEVGKTALTVP 419
           SDFRD +SQS SWDYSAFVRTYALYLDERLEF+M            +E++E G  A    
Sbjct: 123 SDFRDHSSQSNSWDYSAFVRTYALYLDERLEFRMQGKRGKRSAFEYEEDEEEGGAAAQA- 181

Query: 418 TGTPVREMKNDKIFTRTQHLQSLLERLLACRPTGDAKNNRVVLVALYPVMKESFQLYFDI 239
             TPV +MK   IF+R  HLQ LLER LACRPTG+AK+NRVVLVALYP++KESFQ+Y+DI
Sbjct: 182 RNTPVCDMKTVDIFSRINHLQQLLERFLACRPTGEAKSNRVVLVALYPIVKESFQIYYDI 241

Query: 238 TEIMGILVDRFMELEVPDCVKVHEVFIRISKQFDELEHFYSWSKAVGIARSSDYPEVEKI 59
           TEIMGIL++RFMELEV DCVKVHE+F R+ KQFDEL+ FY+W ++ GIARSS+YPEVEKI
Sbjct: 242 TEIMGILIERFMELEVQDCVKVHEIFYRVLKQFDELDSFYTWCRSTGIARSSEYPEVEKI 301

Query: 58  TQKKLEIMDEFIRDKSILA 2
             KKL++MDEFIRDK+ LA
Sbjct: 302 ALKKLDLMDEFIRDKAALA 320


>ref|XP_002270803.1| PREDICTED: putative clathrin assembly protein At1g03050-like [Vitis
           vinifera]
          Length = 582

 Score =  459 bits (1182), Expect = e-127
 Identities = 229/319 (71%), Positives = 270/319 (84%), Gaps = 1/319 (0%)
 Frame = -1

Query: 955 PMALRKAIGAVKDQTTISIAKVSNSTSLSDLDVAIVKATRHEEYPADERYIREILSLTCY 776
           P  +R+A+GAVKDQT+I +AKV +S SL+DLDVAIVKATRHEEYPA+ER+IREILSLTCY
Sbjct: 3   PSKIRRALGAVKDQTSIGLAKVGSSNSLADLDVAIVKATRHEEYPAEERHIREILSLTCY 62

Query: 775 SRAHVSSCVNTISRRLNKTRNWTVALKTLMLIHRLLNDGDSAYEQEISFATRRGTRLLNM 596
           SRA VS+CVNT++RRLNKT+NWTVALKTLMLIHRLL DGD +YEQEI F+TRRGTR+LNM
Sbjct: 63  SRAFVSACVNTLARRLNKTKNWTVALKTLMLIHRLLADGDPSYEQEIFFSTRRGTRILNM 122

Query: 595 SDFRD-TSQSGSWDYSAFVRTYALYLDERLEFKMYXXXXXXXXXXGDEEDEVGKTALTVP 419
           SDFRD +SQS SWDYSAFVRTYALYLDERLEF+M            +E++E G  A    
Sbjct: 123 SDFRDHSSQSNSWDYSAFVRTYALYLDERLEFRMQGKRGKRSAFEYEEDEEEGGAAAQA- 181

Query: 418 TGTPVREMKNDKIFTRTQHLQSLLERLLACRPTGDAKNNRVVLVALYPVMKESFQLYFDI 239
             TPV +MK   IF+R  HLQ LLER LACRPTG+AK+NRVVLVALYP++KESFQ+Y+DI
Sbjct: 182 RNTPVCDMKTVDIFSRINHLQQLLERFLACRPTGEAKSNRVVLVALYPIVKESFQIYYDI 241

Query: 238 TEIMGILVDRFMELEVPDCVKVHEVFIRISKQFDELEHFYSWSKAVGIARSSDYPEVEKI 59
           TEIMGIL++RFMELEV DCVKVHE+F R+ KQFDEL+ FY+W ++ GIARSS+YPEVEKI
Sbjct: 242 TEIMGILIERFMELEVQDCVKVHEIFYRVLKQFDELDSFYTWCRSTGIARSSEYPEVEKI 301

Query: 58  TQKKLEIMDEFIRDKSILA 2
             KKL++MDEFIRDK+ LA
Sbjct: 302 ALKKLDLMDEFIRDKAALA 320


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