BLASTX nr result
ID: Coptis21_contig00024164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00024164
(1021 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat... 162 2e-37
emb|CBI27486.3| unnamed protein product [Vitis vinifera] 162 2e-37
ref|XP_002315826.1| predicted protein [Populus trichocarpa] gi|2... 146 7e-33
ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat... 139 8e-31
gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana] 122 2e-25
>ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 162 bits (409), Expect = 2e-37
Identities = 78/121 (64%), Positives = 95/121 (78%)
Frame = +1
Query: 4 AEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLIW 183
A+KLFDEML K M PD+ +YT+L+ GN+KHG L EA +LRD+M+EIG ELDL Y +LIW
Sbjct: 624 AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIW 683
Query: 184 GLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLVN 363
GL GQVQ+ARNLL EMI KGV PDE VY+C+I KY+ LG + EA ELQNEM KRG++
Sbjct: 684 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 743
Query: 364 G 366
G
Sbjct: 744 G 744
Score = 81.3 bits (199), Expect = 4e-13
Identities = 41/120 (34%), Positives = 73/120 (60%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EAE++F ML +AP++ +YT+L+ G +K ++ A + +M E + DL +YG+++
Sbjct: 448 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 507
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLV 360
WGLC +++EA+ L+ E+ E G+ + +Y +++ Y G TEA L EM+ GL+
Sbjct: 508 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLI 567
Score = 71.6 bits (174), Expect = 3e-10
Identities = 40/119 (33%), Positives = 66/119 (55%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EA L +EML + +Y +L+ G K G + EA +M EIG + ++ +Y +L+
Sbjct: 553 EALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALV 612
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGL 357
GLCK + A+ L EM++KG+ PD+ Y +I+ G + EA L++ MI+ G+
Sbjct: 613 DGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 671
Score = 63.2 bits (152), Expect = 1e-07
Identities = 39/120 (32%), Positives = 64/120 (53%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EA+ L E+ + + YT+LM K G+ EA +L ++M+++G Y +LI
Sbjct: 518 EAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALI 577
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLV 360
GLCK G VQEA + M E G+ P+ AVY +++ A +L +EM+ +G++
Sbjct: 578 DGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMM 637
>emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 162 bits (409), Expect = 2e-37
Identities = 78/121 (64%), Positives = 95/121 (78%)
Frame = +1
Query: 4 AEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLIW 183
A+KLFDEML K M PD+ +YT+L+ GN+KHG L EA +LRD+M+EIG ELDL Y +LIW
Sbjct: 378 AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIW 437
Query: 184 GLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLVN 363
GL GQVQ+ARNLL EMI KGV PDE VY+C+I KY+ LG + EA ELQNEM KRG++
Sbjct: 438 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMIT 497
Query: 364 G 366
G
Sbjct: 498 G 498
Score = 77.8 bits (190), Expect = 4e-12
Identities = 42/122 (34%), Positives = 74/122 (60%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EAE++F ML +AP++ +YT+L+ G +K ++ A + +M E + DL +YG+++
Sbjct: 249 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTIL 308
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLV 360
WGLC +++EA+ L+ E+ E G+ + +Y +++ Y G TEA L EM+ LV
Sbjct: 309 WGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEML--DLV 366
Query: 361 NG 366
+G
Sbjct: 367 DG 368
>ref|XP_002315826.1| predicted protein [Populus trichocarpa] gi|222864866|gb|EEF01997.1|
predicted protein [Populus trichocarpa]
Length = 636
Score = 146 bits (369), Expect = 7e-33
Identities = 67/133 (50%), Positives = 100/133 (75%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
+A+KLFDEM K+M PD+ +YT+++ GNLKHG EA ++R+KM+E+G ELDL Y SL+
Sbjct: 500 DAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLV 559
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLV 360
WGL + GQVQ+AR L+EMI KG+ PDE + ++ K+++LG + EA ELQNE++++GL+
Sbjct: 560 WGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGLI 619
Query: 361 NGNKVTVESNVRT 399
+GN N++T
Sbjct: 620 HGNSNPAVPNIQT 632
Score = 74.7 bits (182), Expect = 3e-11
Identities = 42/127 (33%), Positives = 75/127 (59%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EAE+LF M + P+ +YT+L+ G++K + +A L ++M E + D+ ++G+++
Sbjct: 325 EAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIV 384
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLV 360
WGLC +++E + +++EM E G+ + +Y +++ Y G TEA L EM R L
Sbjct: 385 WGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEM--RDL- 441
Query: 361 NGNKVTV 381
G +VTV
Sbjct: 442 -GTEVTV 447
Score = 71.2 bits (173), Expect = 4e-10
Identities = 41/118 (34%), Positives = 67/118 (56%)
Frame = +1
Query: 4 AEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLIW 183
A K F +M + P+ +Y+SL+ N K G L EAF L D+M++ +L++ Y +L+
Sbjct: 256 AIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLD 315
Query: 184 GLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGL 357
GLC+ G + EA L M + GV P+ Y +I+ + + M +A EL NEM ++ +
Sbjct: 316 GLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDI 373
Score = 57.0 bits (136), Expect = 7e-06
Identities = 34/119 (28%), Positives = 61/119 (51%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EA L +EM ++ +L+ G K G + EA +M + + ++ +Y +LI
Sbjct: 430 EAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALI 489
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGL 357
GLCK + +A+ L EM +K + PD+ Y +I+ G EA ++N+M++ G+
Sbjct: 490 DGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGI 548
>ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 139 bits (351), Expect = 8e-31
Identities = 68/130 (52%), Positives = 96/130 (73%), Gaps = 1/130 (0%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EA+ LF+EML K ++PD+ YTSL+ GN+KHG EA SLR++MVEIG ELDL Y SLI
Sbjct: 619 EAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLV 360
WG + GQVQ A++LL EM+ KG+ PD+ + +C++ KY++LG + EA L ++M +RGL+
Sbjct: 679 WGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI 738
Query: 361 NGN-KVTVES 387
+G +TV S
Sbjct: 739 SGTIDITVPS 748
Score = 74.7 bits (182), Expect = 3e-11
Identities = 39/119 (32%), Positives = 68/119 (57%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EA K F +M+ + P+ +YTSL+ N K G L+EAF L +M + G L++ Y +L+
Sbjct: 374 EANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALL 433
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGL 357
GLC+ G+++EA L +++ G ++ +Y + + Y M +A ++ EM K+ L
Sbjct: 434 DGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNL 492
Score = 73.2 bits (178), Expect = 1e-10
Identities = 40/127 (31%), Positives = 72/127 (56%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EAE+LF +L ++ YTSL G +K + +A + ++M + + DL +YG+ I
Sbjct: 444 EAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKI 503
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLV 360
WGLC+ +++++ ++ EM++ G+ + +Y +I+ Y +G TEA L EM G+
Sbjct: 504 WGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGI- 562
Query: 361 NGNKVTV 381
K+TV
Sbjct: 563 ---KITV 566
Score = 70.1 bits (170), Expect = 8e-10
Identities = 42/118 (35%), Positives = 65/118 (55%)
Frame = +1
Query: 4 AEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLIW 183
A LF+EM K + PD +Y SL+ G K G L A S+ ++M + G E D+ Y SLI
Sbjct: 270 ARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLIN 329
Query: 184 GLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGL 357
CK ++ +A L M ++G+ P+ Y +I+ + G + EAN+ +MI+ GL
Sbjct: 330 CFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGL 387
Score = 68.9 bits (167), Expect = 2e-09
Identities = 42/119 (35%), Positives = 65/119 (54%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EA L EM + +Y L+ G K G + +A D M G + ++ IY +LI
Sbjct: 549 EAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALI 608
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGL 357
GLCK ++EA+NL +EM++KG+ PD+ VY +I+ G EA L+N M++ G+
Sbjct: 609 DGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGM 667
Score = 66.6 bits (161), Expect = 9e-09
Identities = 37/112 (33%), Positives = 60/112 (53%)
Frame = +1
Query: 22 EMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLIWGLCKVG 201
EM+ + + YT+L+ K GK EA +L +M ++G ++ + YG LI GLCK+G
Sbjct: 521 EMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIG 580
Query: 202 QVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGL 357
VQ+A M G+ P+ +Y +I+ + EA L NEM+ +G+
Sbjct: 581 LVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGI 632
Score = 63.2 bits (152), Expect = 1e-07
Identities = 41/125 (32%), Positives = 65/125 (52%)
Frame = +1
Query: 4 AEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLIW 183
A +F+EM PD +Y SL+ K ++ +AF M + G + ++ Y +LI
Sbjct: 305 AVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLID 364
Query: 184 GLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLVN 363
CK G + EA +MI G+ P+E Y +I+ +G + EA +L++EM + G VN
Sbjct: 365 AFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAG-VN 423
Query: 364 GNKVT 378
N VT
Sbjct: 424 LNIVT 428
Score = 62.4 bits (150), Expect = 2e-07
Identities = 39/120 (32%), Positives = 65/120 (54%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
+A + FD M + P+ YT+L+ G K+ L EA +L ++M++ G D +Y SLI
Sbjct: 584 QAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLI 643
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLV 360
G K G EA +L + M+E G+ D Y +I + G + A L +EM+++G++
Sbjct: 644 DGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGII 703
>gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 122 bits (305), Expect = 2e-25
Identities = 59/130 (45%), Positives = 87/130 (66%)
Frame = +1
Query: 4 AEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLIW 183
A LF++M+ K + PDR +YTSLM GN K G + EA +LRDKM EIG +LDL Y SL+W
Sbjct: 500 ATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVW 559
Query: 184 GLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGLVN 363
GL Q+Q+AR+ L EMI +G+ PDE + + ++ K+++LG + EA ELQ+ ++K L+
Sbjct: 560 GLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLT 619
Query: 364 GNKVTVESNV 393
+ N+
Sbjct: 620 SDNDNALPNI 629
Score = 73.9 bits (180), Expect = 6e-11
Identities = 42/119 (35%), Positives = 68/119 (57%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
+A K + +M + P+ +YTSL+ N K G L +AF L ++M+++G E ++ Y +LI
Sbjct: 253 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 312
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEMIKRGL 357
GLC +++EA L +M GV P+ A Y +I+ + M A EL NE+ RG+
Sbjct: 313 DGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 371
Score = 73.6 bits (179), Expect = 7e-11
Identities = 38/114 (33%), Positives = 67/114 (58%)
Frame = +1
Query: 1 EAEKLFDEMLIKSMAPDRASYTSLMVGNLKHGKLHEAFSLRDKMVEIGFELDLPIYGSLI 180
EAE+LF +M + P+ ASY +L+ G +K + A L +++ G + DL +YG+ I
Sbjct: 323 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 382
Query: 181 WGLCKVGQVQEARNLLSEMIEKGVFPDEAVYLCIINKYHDLGYMTEANELQNEM 342
WGLC + +++ A+ +++EM E G+ + +Y +++ Y G TE L +EM
Sbjct: 383 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 436