BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024154
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   175   4e-42
ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing fact...   175   4e-42
ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing fact...   172   2e-41
ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing fact...   172   2e-41
ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putativ...   172   2e-41

>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score =  175 bits (443), Expect = 4e-42
 Identities = 80/91 (87%), Positives = 84/91 (92%)
 Frame = -3

Query: 274  QLSPQDLTNHARILENNKQCDGEKCIIVTCSFTPGSCSLTAYKLTPTGYEWGRVNMDTEG 95
            QLSPQDLT+HARILENNKQ DGEKCII+TCSFTPGSCSLTAYKLTPTGYEWGRVN DT  
Sbjct: 2219 QLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPTGYEWGRVNKDTGS 2278

Query: 94   NPHSYVSTHYEKVQMLLSDCFLGFYMVPDNG 2
            NPH Y+ THYEKVQMLLSD FLGFYM+PDNG
Sbjct: 2279 NPHGYLPTHYEKVQMLLSDRFLGFYMIPDNG 2309


>ref|XP_003632762.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 2
            [Vitis vinifera] gi|297743472|emb|CBI36339.3| unnamed
            protein product [Vitis vinifera]
          Length = 2347

 Score =  175 bits (443), Expect = 4e-42
 Identities = 80/91 (87%), Positives = 84/91 (92%)
 Frame = -3

Query: 274  QLSPQDLTNHARILENNKQCDGEKCIIVTCSFTPGSCSLTAYKLTPTGYEWGRVNMDTEG 95
            QLSPQDLT+HARILENNKQ DGEKCII+TCSFTPGSCSLTAYKLTPTGYEWGRVN DT  
Sbjct: 2199 QLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPTGYEWGRVNKDTGS 2258

Query: 94   NPHSYVSTHYEKVQMLLSDCFLGFYMVPDNG 2
            NPH Y+ THYEKVQMLLSD FLGFYM+PDNG
Sbjct: 2259 NPHGYLPTHYEKVQMLLSDRFLGFYMIPDNG 2289


>ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
          Length = 2358

 Score =  172 bits (437), Expect = 2e-41
 Identities = 79/91 (86%), Positives = 84/91 (92%)
 Frame = -3

Query: 274  QLSPQDLTNHARILENNKQCDGEKCIIVTCSFTPGSCSLTAYKLTPTGYEWGRVNMDTEG 95
            QLSPQDLT+HA+ILENNKQ DGEKCII+TCSFTPGSCSLTAYKLTP+GYEWGRVN DT  
Sbjct: 2209 QLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGS 2268

Query: 94   NPHSYVSTHYEKVQMLLSDCFLGFYMVPDNG 2
            NPH Y+ THYEKVQMLLSD FLGFYMVPDNG
Sbjct: 2269 NPHGYLPTHYEKVQMLLSDRFLGFYMVPDNG 2299


>ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
          Length = 2358

 Score =  172 bits (437), Expect = 2e-41
 Identities = 79/91 (86%), Positives = 84/91 (92%)
 Frame = -3

Query: 274  QLSPQDLTNHARILENNKQCDGEKCIIVTCSFTPGSCSLTAYKLTPTGYEWGRVNMDTEG 95
            QLSPQDLT+HA+ILENNKQ DGEKCII+TCSFTPGSCSLTAYKLTP+GYEWGRVN DT  
Sbjct: 2209 QLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGS 2268

Query: 94   NPHSYVSTHYEKVQMLLSDCFLGFYMVPDNG 2
            NPH Y+ THYEKVQMLLSD FLGFYMVPDNG
Sbjct: 2269 NPHGYLPTHYEKVQMLLSDRFLGFYMVPDNG 2299


>ref|XP_002517654.1| Pre-mRNA-processing-splicing factor, putative [Ricinus communis]
            gi|223543286|gb|EEF44818.1| Pre-mRNA-processing-splicing
            factor, putative [Ricinus communis]
          Length = 2376

 Score =  172 bits (437), Expect = 2e-41
 Identities = 80/91 (87%), Positives = 83/91 (91%)
 Frame = -3

Query: 274  QLSPQDLTNHARILENNKQCDGEKCIIVTCSFTPGSCSLTAYKLTPTGYEWGRVNMDTEG 95
            QLSPQDLT HARILENNKQ DGEKCII+TCSFTPGSCSLTAYKLTP+GYEWGRVN DT  
Sbjct: 2228 QLSPQDLTAHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRVNKDTGS 2287

Query: 94   NPHSYVSTHYEKVQMLLSDCFLGFYMVPDNG 2
            NPH Y+ THYEKVQMLLSD FLGFYMVPDNG
Sbjct: 2288 NPHGYLPTHYEKVQMLLSDRFLGFYMVPDNG 2318