BLASTX nr result

ID: Coptis21_contig00024142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024142
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]         61   8e-08
ref|XP_002511610.1| conserved hypothetical protein [Ricinus comm...    59   3e-07
ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g...    59   5e-07
emb|CBI16638.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002327061.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 331

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/43 (65%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   ESGATIKVSGSRGEQNLRHIFLGGTSQQVAVARKLIDDYIYSQ 129
           ESGATIKV G RGEQN R I  GG+++QVA+A++ +D+YIYSQ
Sbjct: 274 ESGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQ 316


>ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
           gi|223548790|gb|EEF50279.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 1   ESGATIKVSGSRGEQNLRHIFLGGTSQQVAVARKLIDDYIYSQTPQ 138
           ESGA IKV G +GE+  RHI  GGT+QQVA+A++ +D+YIYSQ  Q
Sbjct: 302 ESGAMIKVYGGKGEKKHRHIQFGGTAQQVALAKQRVDEYIYSQLVQ 347


>ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 343

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 1   ESGATIKVSGSRGEQNLRHIFLGGTSQQVAVARKLIDDYIYSQTPQ 138
           ESGA IKV G +GEQN R I  GG++QQVA+A++ +D+YIYSQ  Q
Sbjct: 290 ESGAMIKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYSQLMQ 335


>emb|CBI16638.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +1

Query: 1   ESGATIKVSGSRGEQNLRHIFLGGTSQQVAVARKLIDDYIYSQTPQ 138
           ESGA IKV G +GEQN R I  GG++QQVA+A++ +D+YIYSQ  Q
Sbjct: 290 ESGAMIKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYSQLMQ 335


>ref|XP_002327061.1| predicted protein [Populus trichocarpa] gi|222835376|gb|EEE73811.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/46 (60%), Positives = 35/46 (76%)
 Frame = +1

Query: 1   ESGATIKVSGSRGEQNLRHIFLGGTSQQVAVARKLIDDYIYSQTPQ 138
           ESGA IKV G +G Q  RHI L G+SQQVA+A++ +D+YIYSQ  Q
Sbjct: 287 ESGAVIKVHGGKGAQKHRHIQLAGSSQQVALAKQRVDEYIYSQLVQ 332


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