BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024138
         (1486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18867.3| unnamed protein product [Vitis vinifera]              456   e-126
gb|ADI58371.1| pentatricopeptide repeat-containing protein [Caps...   397   e-108
ref|XP_004139754.1| PREDICTED: pentatricopeptide repeat-containi...   383   e-104
ref|XP_004161905.1| PREDICTED: pentatricopeptide repeat-containi...   379   e-102
ref|NP_001031285.4| pentatricopeptide repeat-containing protein ...   357   4e-96

>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  456 bits (1173), Expect = e-126
 Identities = 256/495 (51%), Positives = 319/495 (64%)
 Frame = +2

Query: 2    ETWRIMEEKEIEMDTRCYRSIIQALTKGGYLEEALNWLSFLGSSPHSAPDLSMYNIFLNG 181
            E WRIM+EKE+ ++ RCY   IQAL KGGYLEEA N L+F+G +    P L MYN FL G
Sbjct: 113  EIWRIMDEKEVHVNNRCYMLSIQALCKGGYLEEAFNLLNFVGENHDIHPILPMYNNFLRG 172

Query: 182  CAQMGSMVHANSCLDLMENRLVGKSESTYLALLKLAVLQESLSAVQEIWNQYTKYYCPNI 361
            C Q  S++HAN CLDLME++++GK+E TY   LKLAVLQ++LSA  +IW +Y  YY  +I
Sbjct: 173  CVQTRSLLHANQCLDLMEHQVLGKNEVTYSQFLKLAVLQQNLSAAHKIWKEYMTYYSMSI 232

Query: 362  RSLQEFIRSFARLGDLVTAVKALQHTVVLVFQGNASIERPVKGSFQSSRLDIPIPSTIDF 541
             SL++FI SF RL DL +A  ALQH V LVF+G+  I +  +G   SSRLDIPIP   D 
Sbjct: 233  ISLRKFIWSFTRLRDLESAYAALQHMVDLVFKGSIFINKSAEGRLCSSRLDIPIPKNGDM 292

Query: 542  AFKGSSMEENELSLHPSPVLGAMTRAVEGTGCRSSALFTVTNKEQKLRDLSRDLAHGSSD 721
              K   MEENE SL PS                      V++  +K+       +H S  
Sbjct: 293  GLK-RCMEENEHSL-PS----------------------VSDNSKKID------SHAS-- 320

Query: 722  ILNNGTEAMHAMKILRLSFNDVIQACAQARNCKLAEHLFLEMQKLGLEPDSHTFNGLIRA 901
                    M  MK+LR SF+DVI ACAQ +NC LAE L L+MQ LGLEP  HT++GLI+A
Sbjct: 321  --------MPVMKVLRWSFSDVIYACAQTQNCGLAEQLILQMQNLGLEPSCHTYDGLIKA 372

Query: 902  VVNERGVREGLKLLKAMEEMNLKPCNATLRMLSIGCSKVXXXXXXXXXXXQAVESPCIQP 1081
            +V++RG  +G+++LK M+  NLKP ++TL  LSIG SK            Q      + P
Sbjct: 373  IVSDRGFSDGMEVLKTMQLRNLKPYDSTLAALSIGSSKALQLDLAESLLDQISRISYVHP 432

Query: 1082 FNCLLAACDVVDQPERAVRXXXXXXXXXXXXXXXTYELLFSLFGNVNAPYKKGDIYSQAD 1261
            FN  LAACD +DQPERAV                TYELLFSLFGNVNAPY++G++ SQ D
Sbjct: 433  FNAFLAACDTLDQPERAVPILSKMKQLKLQPNVGTYELLFSLFGNVNAPYEEGNMLSQVD 492

Query: 1262 VAKRISAIEMDMLKNGLQHSHSSMVNLLKALGAEGMIKELIHYLSVAKTQFFLANTKEGT 1441
            VA+RI AIEMDM+ NG+QHSH SM NLLKALGAEGMI+EL+ YL VA+ QFF  NT  GT
Sbjct: 493  VARRIKAIEMDMMNNGIQHSHLSMKNLLKALGAEGMIRELMQYLHVAENQFFRTNTYLGT 552

Query: 1442 IIYNSVLYSLVDADE 1486
             IYN+VL+SLV+A E
Sbjct: 553  PIYNTVLHSLVEAKE 567


>gb|ADI58371.1| pentatricopeptide repeat-containing protein [Capsicum annuum]
          Length = 805

 Score =  397 bits (1021), Expect = e-108
 Identities = 228/495 (46%), Positives = 306/495 (61%)
 Frame = +2

Query: 2    ETWRIMEEKEIEMDTRCYRSIIQALTKGGYLEEALNWLSFLGSSPHSAPDLSMYNIFLNG 181
            E WRIMEEKEI +  +CY   ++AL KGGYL+EAL+ ++ +G + +    L +YN FL  
Sbjct: 108  EIWRIMEEKEINISDKCYSLAVRALCKGGYLKEALSLMNIMGENLNCYSMLPIYNNFLAA 167

Query: 182  CAQMGSMVHANSCLDLMENRLVGKSESTYLALLKLAVLQESLSAVQEIWNQYTKYYCPNI 361
            C +  S+ +A+ C+DLME+++VGK+E TY  LLKLAVLQ++LSAV EIW +  K+Y  +I
Sbjct: 168  CYETQSVDYASKCMDLMEHQMVGKNEITYAQLLKLAVLQQNLSAVHEIWKECIKFYSLSI 227

Query: 362  RSLQEFIRSFARLGDLVTAVKALQHTVVLVFQGNASIERPVKGSFQSSRLDIPIPSTIDF 541
             SL++FI SF  LGDL +A  ALQH V L F+ +  I R  +G F   RLDIP PST  +
Sbjct: 228  ISLRKFIWSFTELGDLESAYTALQHMVRLAFR-DCDISRTAEGRFCDVRLDIPAPSTGSW 286

Query: 542  AFKGSSMEENELSLHPSPVLGAMTRAVEGTGCRSSALFTVTNKEQKLRDLSRDLAHGSSD 721
            +F   S++          + G+    +E     +  + TV  K      LS  +      
Sbjct: 287  SFIDVSLD----------IEGSSNFDIESQSLGNMEISTVRKK------LSASV------ 324

Query: 722  ILNNGTEAMHAMKILRLSFNDVIQACAQARNCKLAEHLFLEMQKLGLEPDSHTFNGLIRA 901
                       MK+LR SFNDV+ ACA+ +NC LAE L L+MQ LGL+P   T++G IRA
Sbjct: 325  -----------MKLLRWSFNDVMHACAKVQNCDLAEQLILQMQTLGLQPSGSTYDGFIRA 373

Query: 902  VVNERGVREGLKLLKAMEEMNLKPCNATLRMLSIGCSKVXXXXXXXXXXXQAVESPCIQP 1081
            +   RG  EG+++LK M E N+KP ++TL +L+I CS+            +  E     P
Sbjct: 374  IATTRGFSEGVEVLKVMREENIKPRDSTLAVLAIICSRELELDLAESFLDEIYEIRSPHP 433

Query: 1082 FNCLLAACDVVDQPERAVRXXXXXXXXXXXXXXXTYELLFSLFGNVNAPYKKGDIYSQAD 1261
             N  L ACDV+D+PERAV+               TYELLFSLFGNVNAPY++G++ SQ D
Sbjct: 434  CNAFLEACDVLDRPERAVQIFAKMKKLNLQPNIRTYELLFSLFGNVNAPYEEGNMLSQVD 493

Query: 1262 VAKRISAIEMDMLKNGLQHSHSSMVNLLKALGAEGMIKELIHYLSVAKTQFFLANTKEGT 1441
            VAKRI+AIEMDM+ NGLQHSH S+ N LKALG EGMIKELI YL  A+ +F   +T   T
Sbjct: 494  VAKRINAIEMDMMINGLQHSHLSLKNELKALGTEGMIKELIQYLHAAENRFSRYDTYMIT 553

Query: 1442 IIYNSVLYSLVDADE 1486
             +YN+VL+SLV+A E
Sbjct: 554  PVYNTVLHSLVEAKE 568


>ref|XP_004139754.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like
            [Cucumis sativus]
          Length = 834

 Score =  383 bits (984), Expect = e-104
 Identities = 216/495 (43%), Positives = 300/495 (60%)
 Frame = +2

Query: 2    ETWRIMEEKEIEMDTRCYRSIIQALTKGGYLEEALNWLSFLGSSPHSAPDLSMYNIFLNG 181
            ETW+IMEE+ I ++  C   +I+AL KGGYL+EA   ++FL  S    P L  YN FL  
Sbjct: 125  ETWKIMEERGIFLNNTCSLLMIEALCKGGYLDEAFGLINFLAESHVMFPALPAYNCFLRA 184

Query: 182  CAQMGSMVHANSCLDLMENRLVGKSESTYLALLKLAVLQESLSAVQEIWNQYTKYYCPNI 361
            CA   SMVHA+ CLDLM++++VGK+E+TY  LLKLAV Q++LS+V EIW  + K Y P++
Sbjct: 185  CAIRQSMVHASQCLDLMDHKMVGKNEATYSELLKLAVCQKNLSSVHEIWRDFVKNYSPSV 244

Query: 362  RSLQEFIRSFARLGDLVTAVKALQHTVVLVFQGNASIERPVKGSFQSSRLDIPIPSTIDF 541
             SL++FI S+AR+GD+ +A  ALQ  V L    N +  R ++       LDIPIPS  + 
Sbjct: 245  SSLRKFIWSYARMGDVKSAYTALQKMVTL---NNGAAGRKLQS------LDIPIPSRTEL 295

Query: 542  AFKGSSMEENELSLHPSPVLGAMTRAVEGTGCRSSALFTVTNKEQKLRDLSRDLAHGSSD 721
                 + EE E S+        +    +  G   S +               ++  G   
Sbjct: 296  YRYNFNFEEKEPSIDEFFYKKMVPWNGDVGGISVSGI------------KCGEVETGPLT 343

Query: 722  ILNNGTEAMHAMKILRLSFNDVIQACAQARNCKLAEHLFLEMQKLGLEPDSHTFNGLIRA 901
            + NN   +    K+LR S NDV++AC+ A NC LAE L  +M KLGL+P SHTF+G +R+
Sbjct: 344  VPNNHKSSF-VRKVLRWSSNDVMRACSLAGNCGLAEQLMQQMHKLGLQPSSHTFDGFVRS 402

Query: 902  VVNERGVREGLKLLKAMEEMNLKPCNATLRMLSIGCSKVXXXXXXXXXXXQAVESPCIQP 1081
            VV+ERG   G+++LK M++  L+P ++TL  +S+ CSK            +    P   P
Sbjct: 403  VVSERGFSAGMEILKVMQQRGLEPYDSTLAAVSVSCSKALELDLAEALLERLSACPYPYP 462

Query: 1082 FNCLLAACDVVDQPERAVRXXXXXXXXXXXXXXXTYELLFSLFGNVNAPYKKGDIYSQAD 1261
            FN   +ACD++DQPERA+R               TYELL+SLFGNVNAPY++GD  SQ D
Sbjct: 463  FNAFFSACDMMDQPERAMRMLVKMKQMKVAPDVRTYELLYSLFGNVNAPYEEGDNLSQVD 522

Query: 1262 VAKRISAIEMDMLKNGLQHSHSSMVNLLKALGAEGMIKELIHYLSVAKTQFFLANTKEGT 1441
             AKR+  IEMDM K+G+Q+SH SM+NLLKALG EGM KE++ YL++A+  F+  NT  G 
Sbjct: 523  AAKRVRMIEMDMGKHGIQYSHFSMMNLLKALGTEGMKKEVLQYLNLAENLFYYNNTSLGM 582

Query: 1442 IIYNSVLYSLVDADE 1486
             +YN+VL+ LVD+ E
Sbjct: 583  PVYNTVLHFLVDSKE 597


>ref|XP_004161905.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280-like
            [Cucumis sativus]
          Length = 806

 Score =  379 bits (973), Expect = e-102
 Identities = 214/495 (43%), Positives = 295/495 (59%)
 Frame = +2

Query: 2    ETWRIMEEKEIEMDTRCYRSIIQALTKGGYLEEALNWLSFLGSSPHSAPDLSMYNIFLNG 181
            ETW+IMEE+ I ++  C   +I+AL KGGYL+EA   ++FL  S    P L  YN FL  
Sbjct: 125  ETWKIMEERGIFLNNTCSLLMIEALCKGGYLDEAFGLINFLAESHVMFPALPAYNCFLRA 184

Query: 182  CAQMGSMVHANSCLDLMENRLVGKSESTYLALLKLAVLQESLSAVQEIWNQYTKYYCPNI 361
            CA   SMVHA+ CLDLM++++VGK+E+TY  LLKLAV Q++LS+V EIW  + K Y P++
Sbjct: 185  CAIRQSMVHASQCLDLMDHKMVGKNEATYSELLKLAVCQKNLSSVHEIWRDFVKNYSPSV 244

Query: 362  RSLQEFIRSFARLGDLVTAVKALQHTVVLVFQGNASIERPVKGSFQSSRLDIPIPSTIDF 541
             SL++FI S+AR+GD+ +A  ALQ  V L    N +  R ++       LDIPIPS  + 
Sbjct: 245  SSLRKFIWSYARMGDVKSAYTALQKMVTL---NNGAAGRKLQS------LDIPIPSRTEL 295

Query: 542  AFKGSSMEENELSLHPSPVLGAMTRAVEGTGCRSSALFTVTNKEQKLRDLSRDLAHGSSD 721
             ++G S                    V G  C       +T                   
Sbjct: 296  -YRGIS--------------------VSGIKCGEVETGPLT------------------- 315

Query: 722  ILNNGTEAMHAMKILRLSFNDVIQACAQARNCKLAEHLFLEMQKLGLEPDSHTFNGLIRA 901
             + N  ++    K+LR S NDV++AC+ A NC LAE L  +M KLGL+P SHTF+G +R+
Sbjct: 316  -VPNNHKSSFVRKVLRWSSNDVMRACSLAGNCGLAEQLMQQMHKLGLQPSSHTFDGFVRS 374

Query: 902  VVNERGVREGLKLLKAMEEMNLKPCNATLRMLSIGCSKVXXXXXXXXXXXQAVESPCIQP 1081
            VV+ERG   G+++LK M++  L+P ++TL  +S+ CSK            +    P   P
Sbjct: 375  VVSERGFSAGMEILKVMQQRGLEPYDSTLAAVSVSCSKALELDLAEALLERLSACPYPYP 434

Query: 1082 FNCLLAACDVVDQPERAVRXXXXXXXXXXXXXXXTYELLFSLFGNVNAPYKKGDIYSQAD 1261
            FN   +ACD++DQPERA+R               TYELL+SLFGNVNAPY++GD  SQ D
Sbjct: 435  FNAFFSACDMMDQPERAMRMLVKMKQMKVAPDVRTYELLYSLFGNVNAPYEEGDNLSQVD 494

Query: 1262 VAKRISAIEMDMLKNGLQHSHSSMVNLLKALGAEGMIKELIHYLSVAKTQFFLANTKEGT 1441
             AKR+  IEMDM K+G+Q+SH SM+NLLKALG EGM KE++ YL++A+  F+  NT  G 
Sbjct: 495  AAKRVRMIEMDMGKHGIQYSHFSMMNLLKALGTEGMKKEVLQYLNLAENLFYYNNTSLGM 554

Query: 1442 IIYNSVLYSLVDADE 1486
             +YN+VL+ LVD+ E
Sbjct: 555  PVYNTVLHFLVDSKE 569


>ref|NP_001031285.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|332197698|gb|AEE35819.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score =  357 bits (916), Expect = 4e-96
 Identities = 212/495 (42%), Positives = 286/495 (57%)
 Frame = +2

Query: 2    ETWRIMEEKEIEMDTRCYRSIIQALTKGGYLEEALNWLSFLGSSPHSAPDLSMYNIFLNG 181
            ET+ +M +KEI +D+R    I+++L  GG+L++A  ++  +      +P L +YN FL  
Sbjct: 117  ETYSVMCKKEISLDSRSLLFIVKSLCNGGHLDKASEFIHAVREDDRISPLLPIYNFFLGA 176

Query: 182  CAQMGSMVHANSCLDLMENRLVGKSESTYLALLKLAVLQESLSAVQEIWNQYTKYYCPNI 361
            CA+  S+ HA+ CL+LM+ R VGK+  TY+ALLKLAV Q +LS V +IW  Y  +Y  +I
Sbjct: 177  CARTRSVYHASKCLELMDQRRVGKNGITYVALLKLAVFQRNLSTVNDIWKHYVNHYNLDI 236

Query: 362  RSLQEFIRSFARLGDLVTAVKALQHTVVLVFQGNASIERPVKGSFQSSRLDIPIPSTIDF 541
             SL+ FI SF RLGDL +A + LQH V L  +G   ++   +G   S+RL IP+PS    
Sbjct: 237  LSLRRFIWSFTRLGDLKSAYELLQHMVYLALRGEFFVKSN-RGKLHSTRLYIPVPSK--- 292

Query: 542  AFKGSSMEENELSLHPSPVLGAMTRAVEGTGCRSSALFTVTNKEQKLRDLSRDLAHGSSD 721
                                       + TG    A F VT       D   D    S  
Sbjct: 293  ---------------------------DETGSEKFA-FGVT-------DRIVDCNSSSKV 317

Query: 722  ILNNGTEAMHAMKILRLSFNDVIQACAQARNCKLAEHLFLEMQKLGLEPDSHTFNGLIRA 901
             L  G   + A+++LR SFNDVI AC Q++N +LAE L L+MQ LGL P SHT++G IRA
Sbjct: 318  ALPKGHNKILAIRVLRWSFNDVIHACGQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRA 377

Query: 902  VVNERGVREGLKLLKAMEEMNLKPCNATLRMLSIGCSKVXXXXXXXXXXXQAVESPCIQP 1081
            V    G   G+ LLK M++ NLKP ++TL  ++  CSK            Q  E     P
Sbjct: 378  VAFPEGYEYGMTLLKVMQQQNLKPYDSTLATVAAYCSKALQVDLAEHLLDQISECSYSYP 437

Query: 1082 FNCLLAACDVVDQPERAVRXXXXXXXXXXXXXXXTYELLFSLFGNVNAPYKKGDIYSQAD 1261
            FN LLAA D +DQPERAVR               TYELLFSLFGNVNAPY++G++ SQ D
Sbjct: 438  FNNLLAAYDSLDQPERAVRVLARMKELKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVD 497

Query: 1262 VAKRISAIEMDMLKNGLQHSHSSMVNLLKALGAEGMIKELIHYLSVAKTQFFLANTKEGT 1441
              KRI+AIEMDM++NG QHS  S +N+L+ALGAEGM+ E+I +L  A+     +N   GT
Sbjct: 498  CCKRINAIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGT 557

Query: 1442 IIYNSVLYSLVDADE 1486
              YN VL+SL++A+E
Sbjct: 558  PTYNIVLHSLLEANE 572