BLASTX nr result

ID: Coptis21_contig00024125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024125
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330934.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
ref|XP_002331262.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_003621578.1| DUF246 domain-containing protein [Medicago t...   177   8e-43
gb|ABN09047.1| Hypothetical plant protein [Medicago truncatula]       177   8e-43
ref|XP_002525947.1| conserved hypothetical protein [Ricinus comm...   177   1e-42

>ref|XP_002330934.1| predicted protein [Populus trichocarpa] gi|222873128|gb|EEF10259.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score =  179 bits (454), Expect = 2e-43
 Identities = 92/131 (70%), Positives = 101/131 (77%)
 Frame = -3

Query: 395 RLLNATLVIPEXXXXXXXXXXXXXXXXFAYLYNEDQFIVALAKDVRVLKTLPKTLKLARR 216
           RLLNATLVIPE                FAYLYNEDQF+ AL KDV+V+KTLP+ LK ARR
Sbjct: 127 RLLNATLVIPEIQSTTSSKGISSEFKSFAYLYNEDQFMAALVKDVKVVKTLPQNLKGARR 186

Query: 215 MKRIPSFKVRYETSPEFYLHHVLPVLKRHLVVELVVSGGGCLQAILPPHLEEYQRLRCRV 36
            K+IPSF+V    SP FYLHHVLPVL +H VVELVVS GGCLQAILPPHLEEYQRLRCRV
Sbjct: 187 KKKIPSFRVPNSASPYFYLHHVLPVLNKHAVVELVVSEGGCLQAILPPHLEEYQRLRCRV 246

Query: 35  AFHALQFRQDV 3
            FHAL+FRQ+V
Sbjct: 247 GFHALRFRQEV 257


>ref|XP_002331262.1| predicted protein [Populus trichocarpa] gi|222873687|gb|EEF10818.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score =  178 bits (451), Expect = 5e-43
 Identities = 91/131 (69%), Positives = 102/131 (77%)
 Frame = -3

Query: 395 RLLNATLVIPEXXXXXXXXXXXXXXXXFAYLYNEDQFIVALAKDVRVLKTLPKTLKLARR 216
           RLLNATLVIPE                FAYLYNED F+ AL KDV+V+KTLP+ LK ARR
Sbjct: 127 RLLNATLVIPEIQSTTRSKGISSQFKSFAYLYNEDNFMAALVKDVKVVKTLPQNLKDARR 186

Query: 215 MKRIPSFKVRYETSPEFYLHHVLPVLKRHLVVELVVSGGGCLQAILPPHLEEYQRLRCRV 36
           +K+IPSF+V    SP FYLHHVLPVL +H+VVELVVS GGCLQAILPP LEEYQRLRCRV
Sbjct: 187 LKKIPSFRVPNSASPYFYLHHVLPVLNKHVVVELVVSDGGCLQAILPPQLEEYQRLRCRV 246

Query: 35  AFHALQFRQDV 3
           AFHAL+FRQ+V
Sbjct: 247 AFHALRFRQEV 257


>ref|XP_003621578.1| DUF246 domain-containing protein [Medicago truncatula]
           gi|355496593|gb|AES77796.1| DUF246 domain-containing
           protein [Medicago truncatula]
          Length = 668

 Score =  177 bits (449), Expect = 8e-43
 Identities = 91/131 (69%), Positives = 100/131 (76%)
 Frame = -3

Query: 395 RLLNATLVIPEXXXXXXXXXXXXXXXXFAYLYNEDQFIVALAKDVRVLKTLPKTLKLARR 216
           RLLNATL +PE                FAYLYNEDQFI +LAKDV+V++TLPK LK ARR
Sbjct: 125 RLLNATLAMPEIQSTTSSKGISSQFKSFAYLYNEDQFIFSLAKDVKVIRTLPKYLKGARR 184

Query: 215 MKRIPSFKVRYETSPEFYLHHVLPVLKRHLVVELVVSGGGCLQAILPPHLEEYQRLRCRV 36
            K IPSFKV Y  SP +YLHHVLPVLK+H VVELVVS GGCLQA LPP  EEYQRLRCRV
Sbjct: 185 KKEIPSFKVPYSASPFYYLHHVLPVLKKHSVVELVVSNGGCLQATLPPSFEEYQRLRCRV 244

Query: 35  AFHALQFRQDV 3
           +FHALQFRQ+V
Sbjct: 245 SFHALQFRQEV 255


>gb|ABN09047.1| Hypothetical plant protein [Medicago truncatula]
          Length = 671

 Score =  177 bits (449), Expect = 8e-43
 Identities = 91/131 (69%), Positives = 100/131 (76%)
 Frame = -3

Query: 395 RLLNATLVIPEXXXXXXXXXXXXXXXXFAYLYNEDQFIVALAKDVRVLKTLPKTLKLARR 216
           RLLNATL +PE                FAYLYNEDQFI +LAKDV+V++TLPK LK ARR
Sbjct: 125 RLLNATLAMPEIQSTTSSKGISSQFKSFAYLYNEDQFIFSLAKDVKVIRTLPKYLKGARR 184

Query: 215 MKRIPSFKVRYETSPEFYLHHVLPVLKRHLVVELVVSGGGCLQAILPPHLEEYQRLRCRV 36
            K IPSFKV Y  SP +YLHHVLPVLK+H VVELVVS GGCLQA LPP  EEYQRLRCRV
Sbjct: 185 KKEIPSFKVPYSASPFYYLHHVLPVLKKHSVVELVVSNGGCLQATLPPSFEEYQRLRCRV 244

Query: 35  AFHALQFRQDV 3
           +FHALQFRQ+V
Sbjct: 245 SFHALQFRQEV 255


>ref|XP_002525947.1| conserved hypothetical protein [Ricinus communis]
           gi|223534776|gb|EEF36467.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 671

 Score =  177 bits (448), Expect = 1e-42
 Identities = 91/131 (69%), Positives = 101/131 (77%)
 Frame = -3

Query: 395 RLLNATLVIPEXXXXXXXXXXXXXXXXFAYLYNEDQFIVALAKDVRVLKTLPKTLKLARR 216
           RLLNATLV+PE                FAYLYNEDQF+ AL KDV+V+KTLPK LK ARR
Sbjct: 120 RLLNATLVVPELQSTTSSKGISSEFKSFAYLYNEDQFMAALVKDVKVVKTLPKDLKGARR 179

Query: 215 MKRIPSFKVRYETSPEFYLHHVLPVLKRHLVVELVVSGGGCLQAILPPHLEEYQRLRCRV 36
            K+IPSF+V    SP FYLH VLPVL++H VVELVVS GGCLQAILPP LEEYQRLRCRV
Sbjct: 180 KKKIPSFRVSRSASPYFYLHQVLPVLRKHAVVELVVSDGGCLQAILPPQLEEYQRLRCRV 239

Query: 35  AFHALQFRQDV 3
           AFHAL+FRQ+V
Sbjct: 240 AFHALRFRQEV 250


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