BLASTX nr result

ID: Coptis21_contig00024120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024120
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241345.1| uncharacterized protein LOC100788682 [Glycin...   154   6e-36
ref|XP_003546666.1| PREDICTED: RNA exonuclease 4-like [Glycine max]   153   1e-35
gb|ACU17968.1| unknown [Glycine max]                                  153   1e-35
ref|XP_002302830.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_002454409.1| hypothetical protein SORBIDRAFT_04g030330 [S...   147   9e-34

>ref|NP_001241345.1| uncharacterized protein LOC100788682 [Glycine max]
           gi|255641871|gb|ACU21204.1| unknown [Glycine max]
          Length = 366

 Score =  154 bits (390), Expect = 6e-36
 Identities = 68/103 (66%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
 Frame = +2

Query: 149 RYKCSACYKMYNKKEHLVEHMKDSYHSVHQPKCGVCKKHCKSFESLREHLIGPLPKSSCA 328
           R+KC ACYK Y KKEHL+EHMK SYHSVHQP+CGVC+KHCKSFESLREHL GPLP+  C+
Sbjct: 14  RHKCLACYKQYKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFESLREHLTGPLPRGICS 73

Query: 329 QIFSTQGCNLCMTILDCSDALTAHKEICRLS-PTAPLVKQLIY 454
           +IFS QGC LC+ + D   +L  H+E CRLS PT P    L Y
Sbjct: 74  KIFSQQGCQLCLALFDSPGSLIGHRETCRLSAPTCPGTSALPY 116


>ref|XP_003546666.1| PREDICTED: RNA exonuclease 4-like [Glycine max]
          Length = 366

 Score =  153 bits (387), Expect = 1e-35
 Identities = 67/103 (65%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = +2

Query: 149 RYKCSACYKMYNKKEHLVEHMKDSYHSVHQPKCGVCKKHCKSFESLREHLIGPLPKSSCA 328
           R+KC ACYK Y KKEHL+EHMK SYHSVHQP+CGVC+KHCKSFESLREHL GPLP+  C+
Sbjct: 14  RHKCLACYKQYKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFESLREHLTGPLPRGICS 73

Query: 329 QIFSTQGCNLCMTILDCSDALTAHKEICRLS-PTAPLVKQLIY 454
           +IFS QGC LC+ + D   +L  H++ICR+S PT P    L Y
Sbjct: 74  KIFSQQGCQLCLALFDSPGSLIDHRKICRISAPTCPGTSALPY 116


>gb|ACU17968.1| unknown [Glycine max]
          Length = 241

 Score =  153 bits (387), Expect = 1e-35
 Identities = 67/103 (65%), Positives = 80/103 (77%), Gaps = 1/103 (0%)
 Frame = +2

Query: 149 RYKCSACYKMYNKKEHLVEHMKDSYHSVHQPKCGVCKKHCKSFESLREHLIGPLPKSSCA 328
           R+KC ACYK Y KKEHL+EHMK SYHSVHQP+CGVC+KHCKSFESLREHL GPLP+  C+
Sbjct: 14  RHKCLACYKQYKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFESLREHLTGPLPRGICS 73

Query: 329 QIFSTQGCNLCMTILDCSDALTAHKEICRLS-PTAPLVKQLIY 454
           +IFS QGC LC+ + D   +L  H++ICR+S PT P    L Y
Sbjct: 74  KIFSQQGCQLCLALFDSPGSLIDHRKICRISAPTCPGTSALPY 116


>ref|XP_002302830.1| predicted protein [Populus trichocarpa] gi|222844556|gb|EEE82103.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  150 bits (379), Expect = 1e-34
 Identities = 67/120 (55%), Positives = 85/120 (70%)
 Frame = +2

Query: 107 MDEVETLAKKIKTERYKCSACYKMYNKKEHLVEHMKDSYHSVHQPKCGVCKKHCKSFESL 286
           MD       + +TER+KC ACYK + KKEHLVEHMK SYH+ HQPKCGVC+KHCKSFESL
Sbjct: 1   MDAEADPPTRSRTERHKCFACYKQFKKKEHLVEHMKISYHTPHQPKCGVCQKHCKSFESL 60

Query: 287 REHLIGPLPKSSCAQIFSTQGCNLCMTILDCSDALTAHKEICRLSPTAPLVKQLIYFVAS 466
           R HL GPL ++ C++ FS QGC+LC+ + D   +L  H+EIC LS  A L  +++ F  S
Sbjct: 61  RNHLTGPLSRAGCSRTFSAQGCDLCLKLYDSPSSLGKHREICHLSAPASLGTKILPFAGS 120


>ref|XP_002454409.1| hypothetical protein SORBIDRAFT_04g030330 [Sorghum bicolor]
           gi|241934240|gb|EES07385.1| hypothetical protein
           SORBIDRAFT_04g030330 [Sorghum bicolor]
          Length = 336

 Score =  147 bits (371), Expect = 9e-34
 Identities = 61/107 (57%), Positives = 83/107 (77%)
 Frame = +2

Query: 116 VETLAKKIKTERYKCSACYKMYNKKEHLVEHMKDSYHSVHQPKCGVCKKHCKSFESLREH 295
           V++  +  +T R KC+AC++ YN+ EHLVEHMK SYHSVH+PKCGVC+KHC+SFESLREH
Sbjct: 2   VDSRRESSETLRNKCAACFRQYNRMEHLVEHMKVSYHSVHEPKCGVCRKHCRSFESLREH 61

Query: 296 LIGPLPKSSCAQIFSTQGCNLCMTILDCSDALTAHKEICRLSPTAPL 436
           LIGPLPK  CA++FS +GC++C+ I D +  +  H+  C+ S  AP+
Sbjct: 62  LIGPLPKVECARVFSVRGCSICLNIFDSNATVRYHRAACQYSRAAPM 108


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