BLASTX nr result
ID: Coptis21_contig00024120
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024120 (521 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001241345.1| uncharacterized protein LOC100788682 [Glycin... 154 6e-36 ref|XP_003546666.1| PREDICTED: RNA exonuclease 4-like [Glycine max] 153 1e-35 gb|ACU17968.1| unknown [Glycine max] 153 1e-35 ref|XP_002302830.1| predicted protein [Populus trichocarpa] gi|2... 150 1e-34 ref|XP_002454409.1| hypothetical protein SORBIDRAFT_04g030330 [S... 147 9e-34 >ref|NP_001241345.1| uncharacterized protein LOC100788682 [Glycine max] gi|255641871|gb|ACU21204.1| unknown [Glycine max] Length = 366 Score = 154 bits (390), Expect = 6e-36 Identities = 68/103 (66%), Positives = 79/103 (76%), Gaps = 1/103 (0%) Frame = +2 Query: 149 RYKCSACYKMYNKKEHLVEHMKDSYHSVHQPKCGVCKKHCKSFESLREHLIGPLPKSSCA 328 R+KC ACYK Y KKEHL+EHMK SYHSVHQP+CGVC+KHCKSFESLREHL GPLP+ C+ Sbjct: 14 RHKCLACYKQYKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFESLREHLTGPLPRGICS 73 Query: 329 QIFSTQGCNLCMTILDCSDALTAHKEICRLS-PTAPLVKQLIY 454 +IFS QGC LC+ + D +L H+E CRLS PT P L Y Sbjct: 74 KIFSQQGCQLCLALFDSPGSLIGHRETCRLSAPTCPGTSALPY 116 >ref|XP_003546666.1| PREDICTED: RNA exonuclease 4-like [Glycine max] Length = 366 Score = 153 bits (387), Expect = 1e-35 Identities = 67/103 (65%), Positives = 80/103 (77%), Gaps = 1/103 (0%) Frame = +2 Query: 149 RYKCSACYKMYNKKEHLVEHMKDSYHSVHQPKCGVCKKHCKSFESLREHLIGPLPKSSCA 328 R+KC ACYK Y KKEHL+EHMK SYHSVHQP+CGVC+KHCKSFESLREHL GPLP+ C+ Sbjct: 14 RHKCLACYKQYKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFESLREHLTGPLPRGICS 73 Query: 329 QIFSTQGCNLCMTILDCSDALTAHKEICRLS-PTAPLVKQLIY 454 +IFS QGC LC+ + D +L H++ICR+S PT P L Y Sbjct: 74 KIFSQQGCQLCLALFDSPGSLIDHRKICRISAPTCPGTSALPY 116 >gb|ACU17968.1| unknown [Glycine max] Length = 241 Score = 153 bits (387), Expect = 1e-35 Identities = 67/103 (65%), Positives = 80/103 (77%), Gaps = 1/103 (0%) Frame = +2 Query: 149 RYKCSACYKMYNKKEHLVEHMKDSYHSVHQPKCGVCKKHCKSFESLREHLIGPLPKSSCA 328 R+KC ACYK Y KKEHL+EHMK SYHSVHQP+CGVC+KHCKSFESLREHL GPLP+ C+ Sbjct: 14 RHKCLACYKQYKKKEHLIEHMKTSYHSVHQPRCGVCQKHCKSFESLREHLTGPLPRGICS 73 Query: 329 QIFSTQGCNLCMTILDCSDALTAHKEICRLS-PTAPLVKQLIY 454 +IFS QGC LC+ + D +L H++ICR+S PT P L Y Sbjct: 74 KIFSQQGCQLCLALFDSPGSLIDHRKICRISAPTCPGTSALPY 116 >ref|XP_002302830.1| predicted protein [Populus trichocarpa] gi|222844556|gb|EEE82103.1| predicted protein [Populus trichocarpa] Length = 349 Score = 150 bits (379), Expect = 1e-34 Identities = 67/120 (55%), Positives = 85/120 (70%) Frame = +2 Query: 107 MDEVETLAKKIKTERYKCSACYKMYNKKEHLVEHMKDSYHSVHQPKCGVCKKHCKSFESL 286 MD + +TER+KC ACYK + KKEHLVEHMK SYH+ HQPKCGVC+KHCKSFESL Sbjct: 1 MDAEADPPTRSRTERHKCFACYKQFKKKEHLVEHMKISYHTPHQPKCGVCQKHCKSFESL 60 Query: 287 REHLIGPLPKSSCAQIFSTQGCNLCMTILDCSDALTAHKEICRLSPTAPLVKQLIYFVAS 466 R HL GPL ++ C++ FS QGC+LC+ + D +L H+EIC LS A L +++ F S Sbjct: 61 RNHLTGPLSRAGCSRTFSAQGCDLCLKLYDSPSSLGKHREICHLSAPASLGTKILPFAGS 120 >ref|XP_002454409.1| hypothetical protein SORBIDRAFT_04g030330 [Sorghum bicolor] gi|241934240|gb|EES07385.1| hypothetical protein SORBIDRAFT_04g030330 [Sorghum bicolor] Length = 336 Score = 147 bits (371), Expect = 9e-34 Identities = 61/107 (57%), Positives = 83/107 (77%) Frame = +2 Query: 116 VETLAKKIKTERYKCSACYKMYNKKEHLVEHMKDSYHSVHQPKCGVCKKHCKSFESLREH 295 V++ + +T R KC+AC++ YN+ EHLVEHMK SYHSVH+PKCGVC+KHC+SFESLREH Sbjct: 2 VDSRRESSETLRNKCAACFRQYNRMEHLVEHMKVSYHSVHEPKCGVCRKHCRSFESLREH 61 Query: 296 LIGPLPKSSCAQIFSTQGCNLCMTILDCSDALTAHKEICRLSPTAPL 436 LIGPLPK CA++FS +GC++C+ I D + + H+ C+ S AP+ Sbjct: 62 LIGPLPKVECARVFSVRGCSICLNIFDSNATVRYHRAACQYSRAAPM 108