BLASTX nr result

ID: Coptis21_contig00024118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024118
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
ref|XP_002523114.1| endo-1,4-beta-glucanase, putative [Ricinus c...   213   2e-53
gb|AFK41115.1| unknown [Medicago truncatula]                          212   2e-53
ref|XP_003591494.1| Endo-1 4-beta-glucanase [Medicago truncatula...   212   2e-53
emb|CBI36884.3| unnamed protein product [Vitis vinifera]              209   2e-52

>ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|222861771|gb|EEE99313.1|
           predicted protein [Populus trichocarpa]
           gi|347466573|gb|AEO97199.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466627|gb|AEO97226.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 510

 Score =  213 bits (542), Expect = 1e-53
 Identities = 98/113 (86%), Positives = 108/113 (95%)
 Frame = -1

Query: 405 KTQVDYLLGDNPLKMSYMVGYGSRYPQRIHHRGSSLPSVAAHPAKIKCSSGFSAMSSQAP 226
           K QVDYLLGDNPLKMSYMVGYG RYPQRIHHRGSSLPS+AAHPAKI+CSSGFS M+SQ+P
Sbjct: 398 KKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSMAAHPAKIQCSSGFSVMNSQSP 457

Query: 225 NPNILIGAVVGGPDAHDQFPDKRSDYEQSEPSTYTNAPLVGSLAYLAHSFGQL 67
           NPNIL+GA+VGGPD HD+FPD+RSDYEQSEP+TY NAPLVG+LAYLAHSFGQL
Sbjct: 458 NPNILVGAIVGGPDEHDRFPDERSDYEQSEPATYMNAPLVGALAYLAHSFGQL 510


>ref|XP_002523114.1| endo-1,4-beta-glucanase, putative [Ricinus communis]
           gi|223537676|gb|EEF39299.1| endo-1,4-beta-glucanase,
           putative [Ricinus communis]
          Length = 510

 Score =  213 bits (541), Expect = 2e-53
 Identities = 98/113 (86%), Positives = 107/113 (94%)
 Frame = -1

Query: 405 KTQVDYLLGDNPLKMSYMVGYGSRYPQRIHHRGSSLPSVAAHPAKIKCSSGFSAMSSQAP 226
           K QVDYLLGDNPLKMSYMVGYG RYPQRIHHRGSSLPS++ HPAKI+CSSGFS M+SQ+P
Sbjct: 398 KKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSISVHPAKIQCSSGFSIMNSQSP 457

Query: 225 NPNILIGAVVGGPDAHDQFPDKRSDYEQSEPSTYTNAPLVGSLAYLAHSFGQL 67
           NPNIL+GAVVGGPD HD+FPDKRSDYEQSEP+TY NAPLVG+LAYLAHSFGQL
Sbjct: 458 NPNILVGAVVGGPDQHDRFPDKRSDYEQSEPATYINAPLVGALAYLAHSFGQL 510


>gb|AFK41115.1| unknown [Medicago truncatula]
          Length = 159

 Score =  212 bits (540), Expect = 2e-53
 Identities = 98/113 (86%), Positives = 106/113 (93%)
 Frame = -1

Query: 405 KTQVDYLLGDNPLKMSYMVGYGSRYPQRIHHRGSSLPSVAAHPAKIKCSSGFSAMSSQAP 226
           K QVDYLLGDNPLKMSYMVGYG RYPQRIHHRGSSLPS+A HP KI+CS+GFS MSSQ+P
Sbjct: 47  KKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSMAVHPGKIQCSAGFSVMSSQSP 106

Query: 225 NPNILIGAVVGGPDAHDQFPDKRSDYEQSEPSTYTNAPLVGSLAYLAHSFGQL 67
           NPNIL+GAVVGGPD HD+FPDKRSDYEQSEP+TY NAPLVG+LAYLAHSFGQL
Sbjct: 107 NPNILVGAVVGGPDQHDRFPDKRSDYEQSEPATYVNAPLVGTLAYLAHSFGQL 159


>ref|XP_003591494.1| Endo-1 4-beta-glucanase [Medicago truncatula]
           gi|355480542|gb|AES61745.1| Endo-1 4-beta-glucanase
           [Medicago truncatula]
          Length = 485

 Score =  212 bits (540), Expect = 2e-53
 Identities = 98/113 (86%), Positives = 106/113 (93%)
 Frame = -1

Query: 405 KTQVDYLLGDNPLKMSYMVGYGSRYPQRIHHRGSSLPSVAAHPAKIKCSSGFSAMSSQAP 226
           K QVDYLLGDNPLKMSYMVGYG RYPQRIHHRGSSLPS+A HP KI+CS+GFS MSSQ+P
Sbjct: 373 KKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSMAVHPGKIQCSAGFSVMSSQSP 432

Query: 225 NPNILIGAVVGGPDAHDQFPDKRSDYEQSEPSTYTNAPLVGSLAYLAHSFGQL 67
           NPNIL+GAVVGGPD HD+FPDKRSDYEQSEP+TY NAPLVG+LAYLAHSFGQL
Sbjct: 433 NPNILVGAVVGGPDQHDRFPDKRSDYEQSEPATYVNAPLVGTLAYLAHSFGQL 485


>emb|CBI36884.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  209 bits (532), Expect = 2e-52
 Identities = 96/113 (84%), Positives = 106/113 (93%)
 Frame = -1

Query: 405 KTQVDYLLGDNPLKMSYMVGYGSRYPQRIHHRGSSLPSVAAHPAKIKCSSGFSAMSSQAP 226
           K QVDYLLGDNPLKMSYMVGYG RYPQRIHHRGSSLPS+A HPAKI+CS+GF+ M SQ+P
Sbjct: 327 KKQVDYLLGDNPLKMSYMVGYGPRYPQRIHHRGSSLPSIAKHPAKIQCSAGFNIMHSQSP 386

Query: 225 NPNILIGAVVGGPDAHDQFPDKRSDYEQSEPSTYTNAPLVGSLAYLAHSFGQL 67
           NPNIL+GAVVGGPD HD+FPD+RSD+EQSEPSTYTNAPLVG+L YLAHSFGQL
Sbjct: 387 NPNILVGAVVGGPDQHDRFPDQRSDFEQSEPSTYTNAPLVGALTYLAHSFGQL 439


Top