BLASTX nr result

ID: Coptis21_contig00024105 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024105
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322401.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47
ref|XP_002510940.1| Pectinesterase-2 precursor, putative [Ricinu...   191   7e-47
ref|XP_003634048.1| PREDICTED: pectinesterase 2-like isoform 2 [...   189   2e-46
emb|CBI24582.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002265104.1| PREDICTED: pectinesterase 2-like isoform 1 [...   189   2e-46

>ref|XP_002322401.1| predicted protein [Populus trichocarpa] gi|222869397|gb|EEF06528.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  191 bits (485), Expect = 5e-47
 Identities = 86/111 (77%), Positives = 100/111 (90%)
 Frame = -3

Query: 333 TDPNQNTGIAIHNSRVMAAVDLTPVLSQYRTYLGRPWKQYSRTVYLQTYIDTLVDPAGWL 154
           TDPNQNTGI+IHNSRVMA+ DL PVLS ++TYLGRPWK+YSRTV+LQTY+D+LVDPAGWL
Sbjct: 389 TDPNQNTGISIHNSRVMASSDLRPVLSSFKTYLGRPWKEYSRTVFLQTYLDSLVDPAGWL 448

Query: 153 PWDGNFALDTLYYAEFKNSGPGSSTTRRVKWGGYRVITNPSEASTFTVGNF 1
            WDGNFAL+TLYY E++NSGPG+ST  RVKW GYRVIT+ +EAS FTV NF
Sbjct: 449 EWDGNFALNTLYYGEYRNSGPGASTRGRVKWRGYRVITSSTEASRFTVANF 499


>ref|XP_002510940.1| Pectinesterase-2 precursor, putative [Ricinus communis]
           gi|223550055|gb|EEF51542.1| Pectinesterase-2 precursor,
           putative [Ricinus communis]
          Length = 455

 Score =  191 bits (484), Expect = 7e-47
 Identities = 87/111 (78%), Positives = 99/111 (89%)
 Frame = -3

Query: 333 TDPNQNTGIAIHNSRVMAAVDLTPVLSQYRTYLGRPWKQYSRTVYLQTYIDTLVDPAGWL 154
           TDPNQNTGI+IHNSRVMAA DL PVLS ++T+LGRPWKQYSRTV+LQTY+D+LVDPAGWL
Sbjct: 327 TDPNQNTGISIHNSRVMAASDLKPVLSSFKTFLGRPWKQYSRTVFLQTYLDSLVDPAGWL 386

Query: 153 PWDGNFALDTLYYAEFKNSGPGSSTTRRVKWGGYRVITNPSEASTFTVGNF 1
            WDGNFAL+TLYY E+KN GP SST+ RVKW GYRVIT+ +EAS FTV NF
Sbjct: 387 EWDGNFALNTLYYGEYKNMGPASSTSGRVKWRGYRVITSATEASQFTVANF 437


>ref|XP_003634048.1| PREDICTED: pectinesterase 2-like isoform 2 [Vitis vinifera]
          Length = 520

 Score =  189 bits (481), Expect = 2e-46
 Identities = 87/111 (78%), Positives = 98/111 (88%)
 Frame = -3

Query: 333 TDPNQNTGIAIHNSRVMAAVDLTPVLSQYRTYLGRPWKQYSRTVYLQTYIDTLVDPAGWL 154
           TDPNQNTGI+IHNSRVMAA DL PVLS ++TYLGRPWK+YSRTVYL TY+DTLVD AGWL
Sbjct: 392 TDPNQNTGISIHNSRVMAATDLKPVLSSFKTYLGRPWKEYSRTVYLGTYLDTLVDSAGWL 451

Query: 153 PWDGNFALDTLYYAEFKNSGPGSSTTRRVKWGGYRVITNPSEASTFTVGNF 1
            WDGNFAL+TLYY E+KN GPGSST+ RVKW GYRVIT+ +EAS F+V NF
Sbjct: 452 EWDGNFALNTLYYGEYKNFGPGSSTSGRVKWRGYRVITSATEASKFSVANF 502


>emb|CBI24582.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  189 bits (481), Expect = 2e-46
 Identities = 87/111 (78%), Positives = 98/111 (88%)
 Frame = -3

Query: 333 TDPNQNTGIAIHNSRVMAAVDLTPVLSQYRTYLGRPWKQYSRTVYLQTYIDTLVDPAGWL 154
           TDPNQNTGI+IHNSRVMAA DL PVLS ++TYLGRPWK+YSRTVYL TY+DTLVD AGWL
Sbjct: 132 TDPNQNTGISIHNSRVMAATDLKPVLSSFKTYLGRPWKEYSRTVYLGTYLDTLVDSAGWL 191

Query: 153 PWDGNFALDTLYYAEFKNSGPGSSTTRRVKWGGYRVITNPSEASTFTVGNF 1
            WDGNFAL+TLYY E+KN GPGSST+ RVKW GYRVIT+ +EAS F+V NF
Sbjct: 192 EWDGNFALNTLYYGEYKNFGPGSSTSGRVKWRGYRVITSATEASKFSVANF 242


>ref|XP_002265104.1| PREDICTED: pectinesterase 2-like isoform 1 [Vitis vinifera]
          Length = 494

 Score =  189 bits (481), Expect = 2e-46
 Identities = 87/111 (78%), Positives = 98/111 (88%)
 Frame = -3

Query: 333 TDPNQNTGIAIHNSRVMAAVDLTPVLSQYRTYLGRPWKQYSRTVYLQTYIDTLVDPAGWL 154
           TDPNQNTGI+IHNSRVMAA DL PVLS ++TYLGRPWK+YSRTVYL TY+DTLVD AGWL
Sbjct: 366 TDPNQNTGISIHNSRVMAATDLKPVLSSFKTYLGRPWKEYSRTVYLGTYLDTLVDSAGWL 425

Query: 153 PWDGNFALDTLYYAEFKNSGPGSSTTRRVKWGGYRVITNPSEASTFTVGNF 1
            WDGNFAL+TLYY E+KN GPGSST+ RVKW GYRVIT+ +EAS F+V NF
Sbjct: 426 EWDGNFALNTLYYGEYKNFGPGSSTSGRVKWRGYRVITSATEASKFSVANF 476


Top