BLASTX nr result

ID: Coptis21_contig00024089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024089
         (1856 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [S...    69   3e-09
ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago ...    69   6e-09
ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 ...    68   7e-09
ref|XP_002445293.1| hypothetical protein SORBIDRAFT_07g007880 [S...    67   2e-08
ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [S...    66   4e-08

>ref|XP_002465815.1| hypothetical protein SORBIDRAFT_01g046340 [Sorghum bicolor]
            gi|241919669|gb|EER92813.1| hypothetical protein
            SORBIDRAFT_01g046340 [Sorghum bicolor]
          Length = 1028

 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 7/248 (2%)
 Frame = +1

Query: 586  VKGKSQIPDSNPDQINNLSTAFASKMRLPIQAIPTVTFNDRMKNKVREYNRFSVVGRVLD 765
            +KG ++ P    +  +        ++ L  + +  V F+D    +      F+VVG+VL 
Sbjct: 8    LKGSAKAPFGGEEDPSPTVADLLQRLNLTEEEVAVVEFSDEEDAEELPPIEFAVVGKVLS 67

Query: 766  GK-LNYKTIKSALEMLWNANAILHMETIKP---DLYQIWLSSHDHMDSLLKEQPWIVANH 933
               ++  TI++A++  W     L    I     +++     +   ++ +L   PW+V  H
Sbjct: 68   PMAVHVNTIRTAMKPAWGNPFGLKFRAIGEKGDNMFMAEFGTKADLERVLSGTPWMVGKH 127

Query: 934  IFQIVSWEEFNESGEEAFLKFYVWINLLNYPSIFLDSHI---VMDNIFDSGLLTPTQVKL 1104
               +  ++E   + E  F +  +W+ +LN P  +++      VM        L  + VKL
Sbjct: 128  AIVLKLYDEKLSASEIVFDRMDIWVRILNLPLGWMNQQRGARVMS-------LIGSVVKL 180

Query: 1105 VELYKQQGNEPAFVRIKAVLDARDPIPPGFLMPVPFKGTQTQWIQFAFEYLPMFCFRCGF 1284
             ++        AF+R +  ++   P+  G L+ +  K  + +W +  +E LP +C  CG 
Sbjct: 181  -DVDSDGKASGAFLRGRVSIEIDKPLRRGVLLRMS-KSEEPKWFEAQYEKLPYYCSSCGM 238

Query: 1285 LGHIIANC 1308
            LGH    C
Sbjct: 239  LGHSEIGC 246


>ref|XP_003590736.1| hypothetical protein MTR_1g073220 [Medicago truncatula]
            gi|355479784|gb|AES60987.1| hypothetical protein
            MTR_1g073220 [Medicago truncatula]
          Length = 361

 Score = 68.6 bits (166), Expect = 6e-09
 Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 1/190 (0%)
 Frame = +1

Query: 742  SVVGRVLDGK-LNYKTIKSALEMLWNANAILHMETIKPDLYQIWLSSHDHMDSLLKEQPW 918
            S++G+++  K ++  +I++AL  +W       +E I   L+  ++   +    +++  PW
Sbjct: 85   SILGKIVSEKAIHRNSIQNALSNIWCNPKGFRVEHIGDKLFHFFMDEQEDTKRIIRGNPW 144

Query: 919  IVANHIFQIVSWEEFNESGEEAFLKFYVWINLLNYPSIFLDSHIVMDNIFDSGLLTPTQV 1098
               N    +  W    ++    F    +W+ L   P+      + +      G +  +  
Sbjct: 145  FFRNSWLIVHPWRRDIDARSLEFRHAPIWVQLRGLPTQCRTKQMGIKIGSSIGTVLAS-- 202

Query: 1099 KLVELYKQQGNEPAFVRIKAVLDARDPIPPGFLMPVPFKGTQTQWIQFAFEYLPMFCFRC 1278
               ELY+   ++   ++IK  L    PI  G  +     G    WI F +E LP FCF C
Sbjct: 203  ---ELYEYP-DKKLIIKIKVNLAVSTPIKAGIYIGSAKDGAH--WIDFRYENLPQFCFAC 256

Query: 1279 GFLGHIIANC 1308
            G +GH  ANC
Sbjct: 257  GLIGHTEANC 266


>ref|XP_002489305.1| hypothetical protein SORBIDRAFT_0010s007680 [Sorghum bicolor]
            gi|241946953|gb|EES20098.1| hypothetical protein
            SORBIDRAFT_0010s007680 [Sorghum bicolor]
          Length = 531

 Score = 68.2 bits (165), Expect = 7e-09
 Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 15/260 (5%)
 Frame = +1

Query: 574  MGSDVKGKSQIPDSNPDQINNLSTAFASKMRLPIQAIPTVTFNDRMKNKVREYNRFSVVG 753
            +G   KG  +  + NP  I+        ++ L  Q    V F+D    ++     + +VG
Sbjct: 4    VGDGTKGAGK-ENPNPSVID-----LFHQLILTEQEEAVVEFSDEEDEEILPQEEWLLVG 57

Query: 754  RVLDGK-LNYKTIKSALEMLWNANAILHMETIKPDLYQIWLSSH---DHMDSLLKEQPWI 921
            +VL    ++  TI+SA++  W     L +  I   +  ++++       ++ +L   PWI
Sbjct: 58   KVLSPTPIHMTTIRSAIKPAWGNPMGLKLRVIGEKVDNMFITEFGCKSDLERVLAGTPWI 117

Query: 922  VANHIFQIVSWEEFNESGEEAFLKFYVWINLLNYP-----------SIFLDSHIVMDNIF 1068
            V  H   +  + E   + E  F +  +W+ + N P           ++ L   +V  ++ 
Sbjct: 118  VGRHAVILKDYNEKLSASEIVFDRMEIWVRIPNLPLGWMNQTRGSRAMSLIGPVVRMDVD 177

Query: 1069 DSGLLTPTQVKLVELYKQQGNEPAFVRIKAVLDARDPIPPGFLMPVPFKGTQTQWIQFAF 1248
            D G             K  G   AF+R +  ++   P+  G L+ +  K  + +W    +
Sbjct: 178  DDG-------------KASG---AFLRARVAIEIDKPLRRGVLLRMS-KAEEPRWFHAQY 220

Query: 1249 EYLPMFCFRCGFLGHIIANC 1308
            E LP +CF CG +GH    C
Sbjct: 221  EKLPYYCFGCGIMGHSEVEC 240


>ref|XP_002445293.1| hypothetical protein SORBIDRAFT_07g007880 [Sorghum bicolor]
            gi|241941643|gb|EES14788.1| hypothetical protein
            SORBIDRAFT_07g007880 [Sorghum bicolor]
          Length = 388

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 46/208 (22%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
 Frame = +1

Query: 697  FNDRMKNKVREYNRFSVVGRVLDGKL-NYKTIKSALEMLWNANAILHMETIKPDLYQIWL 873
            F+D   ++  +   ++VVG+VL   + +  T++ A++  W     L +      +  +++
Sbjct: 46   FSDDEGDENPQPMNWAVVGKVLSPSIVHVNTVRGAMKPAWGNPWGLKIRAFGEKIDNLFV 105

Query: 874  S---SHDHMDSLLKEQPWIVANHIFQIVSWEEFNESGEEAFLKFYVWINLLNYPSIFLDS 1044
            +   S   M+ +L   PW+V  H   +  ++E   + E  F +  +W+ +LN P  +++ 
Sbjct: 106  AEFGSKMDMERILAGSPWMVGRHAVILKQYDERLSASEIVFDRMEIWVRILNLPLGWMN- 164

Query: 1045 HIVMDNIFDSGLLTPTQVKLVELYKQQGNEPAFVRIKAVLDARDPIPPGFLMPVPFKGTQ 1224
              +       GL+    V  +++ +      AF+R +  ++   P+  G L+ +  +  +
Sbjct: 165  --LQRGNRAMGLIG--NVIKMDVDRDGKASGAFLRARLAIEIDKPLRRGVLLRMS-RSEE 219

Query: 1225 TQWIQFAFEYLPMFCFRCGFLGHIIANC 1308
             +W    +E LP FCF CG +GH    C
Sbjct: 220  PKWFAVQYERLPFFCFACGIMGHSEIEC 247


>ref|XP_002447968.1| hypothetical protein SORBIDRAFT_06g019043 [Sorghum bicolor]
            gi|241939151|gb|EES12296.1| hypothetical protein
            SORBIDRAFT_06g019043 [Sorghum bicolor]
          Length = 678

 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 36/141 (25%), Positives = 66/141 (46%)
 Frame = +1

Query: 889  MDSLLKEQPWIVANHIFQIVSWEEFNESGEEAFLKFYVWINLLNYPSIFLDSHIVMDNIF 1068
            M+ +    PW+V  H   + +++E  +  E  F +  +W+ LLN P  +++ H     + 
Sbjct: 1    MERVFGGSPWMVGRHALLLQTYDENLKPSEIRFDRMDIWVRLLNLPLGWMNRHRGERAMG 60

Query: 1069 DSGLLTPTQVKLVELYKQQGNEPAFVRIKAVLDARDPIPPGFLMPVPFKGTQTQWIQFAF 1248
              G+     VK +++ K      A++R +  ++   P+  G L+    K  + +W    +
Sbjct: 61   LVGV-----VKKMDVDKDGKASGAYLRARVAVEVAKPLRRGVLLRTK-KDVEPEWFDLQY 114

Query: 1249 EYLPMFCFRCGFLGHIIANCD 1311
            E LP FC  CG +GH    CD
Sbjct: 115  EKLPFFCLSCGIMGHSELECD 135


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