BLASTX nr result

ID: Coptis21_contig00024079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024079
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612322.1| G2/mitotic-specific cyclin-1 [Medicago trunc...   101   2e-19
emb|CAA55272.1| B-like cyclin [Medicago sativa subsp. x varia]         99   8e-19
sp|P46277.1|CCNB1_MEDVA RecName: Full=G2/mitotic-specific cyclin...    99   8e-19
ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|2...    96   5e-18
gb|ADD51363.1| B2-type cyclin [Malus x domestica]                      96   8e-18

>ref|XP_003612322.1| G2/mitotic-specific cyclin-1 [Medicago truncatula]
           gi|355513657|gb|AES95280.1| G2/mitotic-specific cyclin-1
           [Medicago truncatula]
          Length = 428

 Score =  101 bits (251), Expect = 2e-19
 Identities = 47/73 (64%), Positives = 62/73 (84%)
 Frame = +3

Query: 135 QEVEMKNILADPIIDIDGGDSNNPLAVFEYIEDISSYYRKTERSSGYVPPNYLEQQFDIN 314
           +EVEM++I+ +P++DID  D+N+PLAV EYIED+ SYYRK E S+G V PNY+ QQFDIN
Sbjct: 143 EEVEMEDIMEEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVE-STGCVSPNYMAQQFDIN 201

Query: 315 EKMKAILFDWLVE 353
           E+M+AIL DWL+E
Sbjct: 202 ERMRAILVDWLIE 214


>emb|CAA55272.1| B-like cyclin [Medicago sativa subsp. x varia]
          Length = 428

 Score = 99.0 bits (245), Expect = 8e-19
 Identities = 46/73 (63%), Positives = 61/73 (83%)
 Frame = +3

Query: 135 QEVEMKNILADPIIDIDGGDSNNPLAVFEYIEDISSYYRKTERSSGYVPPNYLEQQFDIN 314
           +EVEM++I+ +P++DID  D+N+PLAV EYIED+ SYYRK E S+  V PNY+ QQFDIN
Sbjct: 143 EEVEMEDIMEEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVE-STSCVSPNYMAQQFDIN 201

Query: 315 EKMKAILFDWLVE 353
           E+M+AIL DWL+E
Sbjct: 202 ERMRAILVDWLIE 214


>sp|P46277.1|CCNB1_MEDVA RecName: Full=G2/mitotic-specific cyclin-1; AltName: Full=B-like
           cyclin; AltName: Full=CycMs1 gi|914861|emb|CAA57559.1|
           cycMs1 [Medicago sativa subsp. x varia]
          Length = 428

 Score = 99.0 bits (245), Expect = 8e-19
 Identities = 46/73 (63%), Positives = 61/73 (83%)
 Frame = +3

Query: 135 QEVEMKNILADPIIDIDGGDSNNPLAVFEYIEDISSYYRKTERSSGYVPPNYLEQQFDIN 314
           +EVEM++I+ +P++DID  D+N+PLAV EYIED+ SYYRK E S+  V PNY+ QQFDIN
Sbjct: 143 EEVEMEDIMEEPVMDIDTPDANDPLAVAEYIEDLYSYYRKVE-STSCVSPNYMAQQFDIN 201

Query: 315 EKMKAILFDWLVE 353
           E+M+AIL DWL+E
Sbjct: 202 ERMRAILVDWLIE 214


>ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|222857240|gb|EEE94787.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 42/72 (58%), Positives = 59/72 (81%)
 Frame = +3

Query: 138 EVEMKNILADPIIDIDGGDSNNPLAVFEYIEDISSYYRKTERSSGYVPPNYLEQQFDINE 317
           EVEM+++  +P++DIDG D  +PLAV EYI+D+ ++Y+K ER SG VPPNY+ QQFDIN+
Sbjct: 152 EVEMEDVEEEPVLDIDGCDKRDPLAVVEYIDDLYNFYKKAER-SGCVPPNYMAQQFDIND 210

Query: 318 KMKAILFDWLVE 353
           +M+ IL DWL+E
Sbjct: 211 RMRGILIDWLIE 222


>gb|ADD51363.1| B2-type cyclin [Malus x domestica]
          Length = 446

 Score = 95.5 bits (236), Expect = 8e-18
 Identities = 45/73 (61%), Positives = 57/73 (78%)
 Frame = +3

Query: 135 QEVEMKNILADPIIDIDGGDSNNPLAVFEYIEDISSYYRKTERSSGYVPPNYLEQQFDIN 314
           +EVEM +I+ +PI+DIDG D  NPLAV +Y+ D+ +YYR+ E  S   PPNYLEQQ DIN
Sbjct: 160 EEVEMVDIVEEPIVDIDGSDLKNPLAVVDYVGDLYAYYRRMEGFS-CAPPNYLEQQCDIN 218

Query: 315 EKMKAILFDWLVE 353
           EKM+AIL DWL+E
Sbjct: 219 EKMRAILIDWLIE 231


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