BLASTX nr result

ID: Coptis21_contig00024076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024076
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...    92   6e-17
ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...    92   6e-17
gb|AFW57413.1| hypothetical protein ZEAMMB73_835296 [Zea mays]         90   2e-16
emb|CBI38030.3| unnamed protein product [Vitis vinifera]               90   2e-16
emb|CBI15777.3| unnamed protein product [Vitis vinifera]               90   2e-16

>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/71 (63%), Positives = 52/71 (73%)
 Frame = -1

Query: 214 LKQWVEHMGILFLGYKQFANIXXXXXXXXXXXACHDILLKVPTILICDEGHTPRNKDTDI 35
           L QWVEH  ILFLGYKQF+ I           AC +ILL+VPTILI DEGHTPRN++TD 
Sbjct: 463 LNQWVEHKSILFLGYKQFSTIVCDVETSAASTACQNILLQVPTILILDEGHTPRNENTDT 522

Query: 34  LSSLAKVQTPR 2
           L +LAKV+TPR
Sbjct: 523 LQTLAKVRTPR 533


>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A containing DEAD/H box
           1B-like [Cucumis sativus]
          Length = 903

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/71 (63%), Positives = 52/71 (73%)
 Frame = -1

Query: 214 LKQWVEHMGILFLGYKQFANIXXXXXXXXXXXACHDILLKVPTILICDEGHTPRNKDTDI 35
           L QWVEH  ILFLGYKQF+ I           AC +ILL+VPTILI DEGHTPRN++TD 
Sbjct: 463 LNQWVEHKSILFLGYKQFSTIVCDVETSAASTACQNILLQVPTILILDEGHTPRNENTDT 522

Query: 34  LSSLAKVQTPR 2
           L +LAKV+TPR
Sbjct: 523 LQTLAKVRTPR 533


>gb|AFW57413.1| hypothetical protein ZEAMMB73_835296 [Zea mays]
          Length = 950

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/71 (60%), Positives = 51/71 (71%)
 Frame = -1

Query: 214 LKQWVEHMGILFLGYKQFANIXXXXXXXXXXXACHDILLKVPTILICDEGHTPRNKDTDI 35
           LK W + MGILFLGYKQF+ I           AC D LLKVP +LI DEGHTPRNK+TD+
Sbjct: 507 LKSWEDKMGILFLGYKQFSTIVTDDGGSKVTAACRDRLLKVPNLLILDEGHTPRNKETDV 566

Query: 34  LSSLAKVQTPR 2
           L SL++V+TPR
Sbjct: 567 LESLSRVETPR 577


>emb|CBI38030.3| unnamed protein product [Vitis vinifera]
          Length = 856

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/71 (63%), Positives = 51/71 (71%)
 Frame = -1

Query: 214 LKQWVEHMGILFLGYKQFANIXXXXXXXXXXXACHDILLKVPTILICDEGHTPRNKDTDI 35
           LKQWV    ILFLGYKQF++I           AC +ILLK P ILI DEGHTPRN++TD+
Sbjct: 437 LKQWVAEKSILFLGYKQFSSIVCGDGASKATIACQEILLKAPQILILDEGHTPRNENTDV 496

Query: 34  LSSLAKVQTPR 2
           L SLAKVQTPR
Sbjct: 497 LYSLAKVQTPR 507


>emb|CBI15777.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/71 (63%), Positives = 51/71 (71%)
 Frame = -1

Query: 214 LKQWVEHMGILFLGYKQFANIXXXXXXXXXXXACHDILLKVPTILICDEGHTPRNKDTDI 35
           LKQWV    ILFLGYKQF++I           AC +ILLK P ILI DEGHTPRN++TD+
Sbjct: 396 LKQWVAEKSILFLGYKQFSSIVCGDGASKAAMACQEILLKAPQILILDEGHTPRNENTDV 455

Query: 34  LSSLAKVQTPR 2
           L SLAKVQTPR
Sbjct: 456 LYSLAKVQTPR 466


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