BLASTX nr result

ID: Coptis21_contig00024065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024065
         (219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16259.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
gb|ABK93461.1| unknown [Populus trichocarpa]                           66   3e-09
ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni...    66   3e-09
ref|NP_001240148.1| uncharacterized protein LOC100810335 [Glycin...    62   4e-08

>emb|CBI16259.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/73 (45%), Positives = 50/73 (68%)
 Frame = +1

Query: 1   LDQACFGSRIVTAKNKDKKHYELSLEEAL*SFQSLKFLKIRWKEKCFKNSDKLWELMRLR 180
           L+++CFG  ++TA+ KDK+ ++LS+EEA     SL  LKI  ++   KN ++LW+ M+ R
Sbjct: 56  LNRSCFGRPVITAE-KDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSR 114

Query: 181 RKQFSIFYKAYSH 219
           R+ F  FY AYSH
Sbjct: 115 RETFPDFYMAYSH 127


>ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/73 (47%), Positives = 49/73 (67%)
 Frame = +1

Query: 1   LDQACFGSRIVTAKNKDKKHYELSLEEAL*SFQSLKFLKIRWKEKCFKNSDKLWELMRLR 180
           L +ACFG  I+TA+ K+K+ ++L LEEA     SLK LKI  ++   KN   LW  M+L+
Sbjct: 56  LTRACFGKPIITAE-KEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLK 114

Query: 181 RKQFSIFYKAYSH 219
           +++F  FYKAYSH
Sbjct: 115 KEKFPDFYKAYSH 127


>gb|ABK93461.1| unknown [Populus trichocarpa]
          Length = 235

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/73 (47%), Positives = 49/73 (67%)
 Frame = +1

Query: 1   LDQACFGSRIVTAKNKDKKHYELSLEEAL*SFQSLKFLKIRWKEKCFKNSDKLWELMRLR 180
           L +ACFG  I+TA+ K+K+ ++L LEEA     SLK LKI  ++   KN   LW  M+L+
Sbjct: 56  LTRACFGKPIITAE-KEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLK 114

Query: 181 RKQFSIFYKAYSH 219
           +++F  FYKAYSH
Sbjct: 115 KEKFPDFYKAYSH 127


>ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis
           vinifera]
          Length = 242

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 33/73 (45%), Positives = 50/73 (68%)
 Frame = +1

Query: 1   LDQACFGSRIVTAKNKDKKHYELSLEEAL*SFQSLKFLKIRWKEKCFKNSDKLWELMRLR 180
           L+++CFG  ++TA+ KDK+ ++LS+EEA     SL  LKI  ++   KN ++LW+ M+ R
Sbjct: 56  LNRSCFGRPVITAE-KDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSR 114

Query: 181 RKQFSIFYKAYSH 219
           R+ F  FY AYSH
Sbjct: 115 RETFPDFYMAYSH 127


>ref|NP_001240148.1| uncharacterized protein LOC100810335 [Glycine max]
           gi|255634724|gb|ACU17724.1| unknown [Glycine max]
          Length = 255

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +1

Query: 1   LDQACFGSRIVTAKNKDKKHYELSLEEAL*SFQSLKFLKIR--WKEKCFKNSDKLWELMR 174
           LD+ACFGS + T + KDK  ++LS EEA     SLK LKI     +   +NS++LW  M+
Sbjct: 62  LDKACFGSPVRTVE-KDKPRFQLSFEEAFYLCYSLKCLKINNDSDDTSPQNSEELWHYMK 120

Query: 175 LRRKQFSIFYKAYSH 219
            +++ F  FYKAYSH
Sbjct: 121 SKKETFPCFYKAYSH 135


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