BLASTX nr result
ID: Coptis21_contig00024065
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024065 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI16259.3| unnamed protein product [Vitis vinifera] 66 3e-09 ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 gb|ABK93461.1| unknown [Populus trichocarpa] 66 3e-09 ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subuni... 66 3e-09 ref|NP_001240148.1| uncharacterized protein LOC100810335 [Glycin... 62 4e-08 >emb|CBI16259.3| unnamed protein product [Vitis vinifera] Length = 232 Score = 65.9 bits (159), Expect = 3e-09 Identities = 33/73 (45%), Positives = 50/73 (68%) Frame = +1 Query: 1 LDQACFGSRIVTAKNKDKKHYELSLEEAL*SFQSLKFLKIRWKEKCFKNSDKLWELMRLR 180 L+++CFG ++TA+ KDK+ ++LS+EEA SL LKI ++ KN ++LW+ M+ R Sbjct: 56 LNRSCFGRPVITAE-KDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSR 114 Query: 181 RKQFSIFYKAYSH 219 R+ F FY AYSH Sbjct: 115 RETFPDFYMAYSH 127 >ref|XP_002313727.1| predicted protein [Populus trichocarpa] gi|222850135|gb|EEE87682.1| predicted protein [Populus trichocarpa] Length = 235 Score = 65.9 bits (159), Expect = 3e-09 Identities = 35/73 (47%), Positives = 49/73 (67%) Frame = +1 Query: 1 LDQACFGSRIVTAKNKDKKHYELSLEEAL*SFQSLKFLKIRWKEKCFKNSDKLWELMRLR 180 L +ACFG I+TA+ K+K+ ++L LEEA SLK LKI ++ KN LW M+L+ Sbjct: 56 LTRACFGKPIITAE-KEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLK 114 Query: 181 RKQFSIFYKAYSH 219 +++F FYKAYSH Sbjct: 115 KEKFPDFYKAYSH 127 >gb|ABK93461.1| unknown [Populus trichocarpa] Length = 235 Score = 65.9 bits (159), Expect = 3e-09 Identities = 35/73 (47%), Positives = 49/73 (67%) Frame = +1 Query: 1 LDQACFGSRIVTAKNKDKKHYELSLEEAL*SFQSLKFLKIRWKEKCFKNSDKLWELMRLR 180 L +ACFG I+TA+ K+K+ ++L LEEA SLK LKI ++ KN LW M+L+ Sbjct: 56 LTRACFGKPIITAE-KEKQWFQLGLEEAFYLCYSLKCLKIAGEDNFVKNDLDLWLYMKLK 114 Query: 181 RKQFSIFYKAYSH 219 +++F FYKAYSH Sbjct: 115 KEKFPDFYKAYSH 127 >ref|XP_002284873.1| PREDICTED: tRNA-splicing endonuclease subunit Sen2-1 [Vitis vinifera] Length = 242 Score = 65.9 bits (159), Expect = 3e-09 Identities = 33/73 (45%), Positives = 50/73 (68%) Frame = +1 Query: 1 LDQACFGSRIVTAKNKDKKHYELSLEEAL*SFQSLKFLKIRWKEKCFKNSDKLWELMRLR 180 L+++CFG ++TA+ KDK+ ++LS+EEA SL LKI ++ KN ++LW+ M+ R Sbjct: 56 LNRSCFGRPVITAE-KDKQWFQLSMEEAFYLCHSLGCLKIVGEDNHLKNDEELWQYMKSR 114 Query: 181 RKQFSIFYKAYSH 219 R+ F FY AYSH Sbjct: 115 RETFPDFYMAYSH 127 >ref|NP_001240148.1| uncharacterized protein LOC100810335 [Glycine max] gi|255634724|gb|ACU17724.1| unknown [Glycine max] Length = 255 Score = 62.4 bits (150), Expect = 4e-08 Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%) Frame = +1 Query: 1 LDQACFGSRIVTAKNKDKKHYELSLEEAL*SFQSLKFLKIR--WKEKCFKNSDKLWELMR 174 LD+ACFGS + T + KDK ++LS EEA SLK LKI + +NS++LW M+ Sbjct: 62 LDKACFGSPVRTVE-KDKPRFQLSFEEAFYLCYSLKCLKINNDSDDTSPQNSEELWHYMK 120 Query: 175 LRRKQFSIFYKAYSH 219 +++ F FYKAYSH Sbjct: 121 SKKETFPCFYKAYSH 135