BLASTX nr result

ID: Coptis21_contig00024060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024060
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92882.1| unknown [Populus trichocarpa]                           59   7e-11
gb|AEO34840.1| hypothetical protein [Amblyomma maculatum]              64   9e-11
gb|ABK94068.1| unknown [Populus trichocarpa]                           58   1e-10
ref|XP_002972708.1| hypothetical protein SELMODRAFT_97896 [Selag...    56   1e-10
ref|XP_002329115.1| predicted protein [Populus trichocarpa] gi|2...    58   1e-10

>gb|ABK92882.1| unknown [Populus trichocarpa]
          Length = 155

 Score = 58.5 bits (140), Expect(2) = 7e-11
 Identities = 27/53 (50%), Positives = 34/53 (64%)
 Frame = -3

Query: 285 DSKDFEHWVKHMEFDECIIGDETAVMFFKARNEQVTLMKPGVTLFLHNAKIDV 127
           D +     V+     EC+IGDET  + F ARN+QV LMKPG T+ L NAKID+
Sbjct: 59  DRRSVSLHVRQTRIAECLIGDETGTIIFTARNDQVDLMKPGTTVILRNAKIDM 111



 Score = 33.1 bits (74), Expect(2) = 7e-11
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -1

Query: 116 IRLSVDKNSHIEVVDPATFIVEKDNENKL 30
           +RL+VDK   +EV +PA F+V++DN   L
Sbjct: 116 MRLAVDKWGRVEVTEPAEFVVKEDNNLSL 144


>gb|AEO34840.1| hypothetical protein [Amblyomma maculatum]
          Length = 137

 Score = 63.5 bits (153), Expect(2) = 9e-11
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = -3

Query: 261 VKHMEFDECIIGDETAVMFFKARNEQVTLMKPGVTLFLHNAKIDV 127
           V+ M   EC++GDETA++ F ARNEQV LMKPG T+ L NAKID+
Sbjct: 49  VRQMRIAECLVGDETAIIVFTARNEQVDLMKPGTTVILRNAKIDM 93



 Score = 27.7 bits (60), Expect(2) = 9e-11
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 116 IRLSVDKNSHIEVVDPATFIVEKDNENKL 30
           +RL+VDK   +E  D A F V++DN   L
Sbjct: 98  MRLAVDKWGRVEPTDAADFTVKEDNNLSL 126


>gb|ABK94068.1| unknown [Populus trichocarpa]
          Length = 153

 Score = 57.8 bits (138), Expect(2) = 1e-10
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
 Frame = -3

Query: 303 MMTKVLDS-------KDFEHWVKHMEFDECIIGDETAVMFFKARNEQVTLMKPGVTLFLH 145
           +  KVL+S       +   H ++     EC+IGD+T  + F ARNEQV L+KPG T+ L 
Sbjct: 44  LTVKVLNSIAVLPKGRSVSHHLRQSRIAECLIGDDTGSIIFTARNEQVDLVKPGTTVILR 103

Query: 144 NAKIDV 127
           NAKID+
Sbjct: 104 NAKIDM 109



 Score = 33.1 bits (74), Expect(2) = 1e-10
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -1

Query: 116 IRLSVDKNSHIEVVDPATFIVEKDNENKL 30
           +RL+VDK   +EV +PA F+V++DN   L
Sbjct: 114 MRLAVDKWGRVEVTEPAEFVVKEDNNLSL 142


>ref|XP_002972708.1| hypothetical protein SELMODRAFT_97896 [Selaginella moellendorffii]
           gi|302812803|ref|XP_002988088.1| hypothetical protein
           SELMODRAFT_159151 [Selaginella moellendorffii]
           gi|300144194|gb|EFJ10880.1| hypothetical protein
           SELMODRAFT_159151 [Selaginella moellendorffii]
           gi|300159309|gb|EFJ25929.1| hypothetical protein
           SELMODRAFT_97896 [Selaginella moellendorffii]
          Length = 135

 Score = 55.8 bits (133), Expect(2) = 1e-10
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = -3

Query: 261 VKHMEFDECIIGDETAVMFFKARNEQVTLMKPGVTLFLHNAKIDV 127
           V+ M   ECI+GDET V+ F ARNEQV  +K G T+ + NAKID+
Sbjct: 46  VRQMRIAECIVGDETGVIVFAARNEQVDQVKEGTTIIIRNAKIDM 90



 Score = 35.0 bits (79), Expect(2) = 1e-10
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -1

Query: 116 IRLSVDKNSHIEVVDPATFIVEKDNENKL 30
           +RL+VDK   IEV DPA F+V++DN   L
Sbjct: 95  MRLAVDKWGRIEVTDPADFVVKEDNNLSL 123


>ref|XP_002329115.1| predicted protein [Populus trichocarpa] gi|222869784|gb|EEF06915.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 57.8 bits (138), Expect(2) = 1e-10
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
 Frame = -3

Query: 303 MMTKVLDS-------KDFEHWVKHMEFDECIIGDETAVMFFKARNEQVTLMKPGVTLFLH 145
           +  KVL+S       +   H ++     EC+IGD+T  + F ARNEQV L+KPG T+ L 
Sbjct: 27  LTVKVLNSIAVLPKGRSVSHHLRQSRIAECLIGDDTGSIIFTARNEQVDLVKPGTTVILR 86

Query: 144 NAKIDV 127
           NAKID+
Sbjct: 87  NAKIDM 92



 Score = 33.1 bits (74), Expect(2) = 1e-10
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = -1

Query: 116 IRLSVDKNSHIEVVDPATFIVEKDNENKL 30
           +RL+VDK   +EV +PA F+V++DN   L
Sbjct: 97  MRLAVDKWGRVEVTEPAEFVVKEDNNLSL 125


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