BLASTX nr result

ID: Coptis21_contig00024045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024045
         (891 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309080.1| predicted protein [Populus trichocarpa] gi|2...   448   e-124
ref|XP_002323517.1| predicted protein [Populus trichocarpa] gi|2...   443   e-122
ref|NP_565869.1| uncharacterized protein [Arabidopsis thaliana] ...   439   e-121
ref|XP_002881548.1| hypothetical protein ARALYDRAFT_902953 [Arab...   438   e-121
ref|XP_002277889.1| PREDICTED: uncharacterized protein LOC100244...   437   e-120

>ref|XP_002309080.1| predicted protein [Populus trichocarpa] gi|222855056|gb|EEE92603.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  448 bits (1152), Expect = e-124
 Identities = 207/290 (71%), Positives = 243/290 (83%), Gaps = 4/290 (1%)
 Frame = -2

Query: 860 DRLEKTNISHILFGIGGSVKTWKDRRHYSELWWKPNTTRGYVWLDEKPNENEPWLVNSPP 681
           D  EKTNISHILFGIGGS KTW  RRHY+ELWW P  TRGYVWLD+KP EN  W   SP 
Sbjct: 83  DFYEKTNISHILFGIGGSAKTWNKRRHYTELWWMPKITRGYVWLDQKPPENRTWPETSPE 142

Query: 680 YRVSEDTSKFKY----GSRSAIRIARIVLESFRLGNDNVRWFVLGDDDTVFFTENLIDVL 513
           Y+VS DTS+FKY    GSRSA+RIARIV ESF LG +NVRWFV+GDDDTVFF ENL+ VL
Sbjct: 143 YKVSADTSRFKYTCSYGSRSALRIARIVKESFELGEENVRWFVMGDDDTVFFIENLVMVL 202

Query: 512 SRYDHNQMYYIGGNSESVEQDVVHSYGMAFGGGGMALSYPLVVQLVKLLDGCIHRYRYLY 333
           ++YDHNQMYYIGGNSESVEQDV+HSY MA+GGGG A+SYPL  +LV++LDGCI RY   Y
Sbjct: 203 AKYDHNQMYYIGGNSESVEQDVIHSYTMAYGGGGFAISYPLAKELVRVLDGCIDRYASFY 262

Query: 332 GSDERICACVAEIGVSVTKELGFHQFDIRDDPYGLLAAHPVAPLVSLHHLDYVKPLFPEK 153
           GSD++I  C++EIGV +TKELGFHQ DIR DPYGLLAAHP+APLVSLHHLDYV+ +FP+ 
Sbjct: 263 GSDQKIQGCMSEIGVPLTKELGFHQVDIRGDPYGLLAAHPLAPLVSLHHLDYVQSIFPKL 322

Query: 152 DRLDSLRSLMGVYKMDPVRTLQHSFCYDLKQNWSVSISWGYTVQIYPTLL 3
           +R+DS++ L+  YKMDP R LQ+SFCYDL +NWSVS SWGYT+QI+P+L+
Sbjct: 323 NRIDSVKKLISSYKMDPGRALQYSFCYDLTRNWSVSASWGYTIQIHPSLM 372


>ref|XP_002323517.1| predicted protein [Populus trichocarpa]
           gi|224140295|ref|XP_002323518.1| predicted protein
           [Populus trichocarpa] gi|222868147|gb|EEF05278.1|
           predicted protein [Populus trichocarpa]
           gi|222868148|gb|EEF05279.1| predicted protein [Populus
           trichocarpa]
          Length = 503

 Score =  443 bits (1139), Expect = e-122
 Identities = 203/287 (70%), Positives = 237/287 (82%), Gaps = 4/287 (1%)
 Frame = -2

Query: 851 EKTNISHILFGIGGSVKTWKDRRHYSELWWKPNTTRGYVWLDEKPNENEPWLVNSPPYRV 672
           EKTNISHILFGIGGS KTW  RRHY+E+WW PN TRGYVWLD+ P  N+ W + SPPY+V
Sbjct: 84  EKTNISHILFGIGGSAKTWNKRRHYTEVWWMPNITRGYVWLDQNPPGNDTWPLTSPPYKV 143

Query: 671 SEDTSKFKY----GSRSAIRIARIVLESFRLGNDNVRWFVLGDDDTVFFTENLIDVLSRY 504
           S DTS+FKY    GSRSA+RIARIV ESF LG +NVRW VLGDDDTVFF ENL+ VL++Y
Sbjct: 144 SADTSRFKYTCSYGSRSALRIARIVKESFELGLENVRWLVLGDDDTVFFIENLVTVLTKY 203

Query: 503 DHNQMYYIGGNSESVEQDVVHSYGMAFGGGGMALSYPLVVQLVKLLDGCIHRYRYLYGSD 324
           DHNQMYYIGGNSESVEQD +HSY MA+GGGG A+SYPL  +LV++LDGC+ RY   YGSD
Sbjct: 204 DHNQMYYIGGNSESVEQDAIHSYTMAYGGGGFAISYPLAKELVRVLDGCLDRYASFYGSD 263

Query: 323 ERICACVAEIGVSVTKELGFHQFDIRDDPYGLLAAHPVAPLVSLHHLDYVKPLFPEKDRL 144
           +++  C++EIGV +TKELGFHQ DIR DPYGLLAAHP+APLVSLHHLDYV+ +FP   R 
Sbjct: 264 QKVQGCISEIGVPLTKELGFHQVDIRGDPYGLLAAHPLAPLVSLHHLDYVQSIFPGLSRF 323

Query: 143 DSLRSLMGVYKMDPVRTLQHSFCYDLKQNWSVSISWGYTVQIYPTLL 3
           DS+  L+  YK DP RTLQ+SFCYDL +NWSVS SWGYT+Q+YP LL
Sbjct: 324 DSVNKLITAYKTDPGRTLQYSFCYDLTRNWSVSASWGYTIQLYPALL 370


>ref|NP_565869.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3236255|gb|AAC23643.1| putative zinc finger protein
           [Arabidopsis thaliana] gi|330254346|gb|AEC09440.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 532

 Score =  439 bits (1130), Expect = e-121
 Identities = 200/287 (69%), Positives = 242/287 (84%), Gaps = 4/287 (1%)
 Frame = -2

Query: 851 EKTNISHILFGIGGSVKTWKDRRHYSELWWKPNTTRGYVWLDEKPNENEPWLVNSPPYRV 672
           E T+ISHI FGIGGS++TW+DR  YSELWW+PN TRG++WLDE+P  N  WL  SPPY+V
Sbjct: 94  EATDISHIAFGIGGSIQTWRDRSRYSELWWRPNVTRGFIWLDEEPPLNMTWLSTSPPYQV 153

Query: 671 SEDTSKFKY----GSRSAIRIARIVLESFRLGNDNVRWFVLGDDDTVFFTENLIDVLSRY 504
           S DTS+F Y    GSRSAIR+ARI+ E+F LG  +VRWF++GDDDTVFF +NLI VL++Y
Sbjct: 154 SADTSRFSYTCWYGSRSAIRMARIIKETFELGLTDVRWFIMGDDDTVFFVDNLITVLNKY 213

Query: 503 DHNQMYYIGGNSESVEQDVVHSYGMAFGGGGMALSYPLVVQLVKLLDGCIHRYRYLYGSD 324
           DHNQMYYIGGNSESVEQD+VHSY MA+GGGG+A+SYPL V+LVKLLDGCI RY  LYGSD
Sbjct: 214 DHNQMYYIGGNSESVEQDIVHSYAMAYGGGGIAISYPLAVELVKLLDGCIDRYASLYGSD 273

Query: 323 ERICACVAEIGVSVTKELGFHQFDIRDDPYGLLAAHPVAPLVSLHHLDYVKPLFPEKDRL 144
           ++I AC++EIGV +TKELGFHQ DIR +PYGLLAAHPVAPLV+LHHLDYV P+FP   ++
Sbjct: 274 QKIEACLSEIGVPLTKELGFHQVDIRGNPYGLLAAHPVAPLVTLHHLDYVDPIFPGTTQI 333

Query: 143 DSLRSLMGVYKMDPVRTLQHSFCYDLKQNWSVSISWGYTVQIYPTLL 3
           D+LR L+  YK DP R +QHSFC+D  +NW VS+SWGYT+QIYPTL+
Sbjct: 334 DALRRLVSAYKTDPSRIIQHSFCHDQTRNWYVSVSWGYTIQIYPTLV 380


>ref|XP_002881548.1| hypothetical protein ARALYDRAFT_902953 [Arabidopsis lyrata subsp.
           lyrata] gi|297327387|gb|EFH57807.1| hypothetical protein
           ARALYDRAFT_902953 [Arabidopsis lyrata subsp. lyrata]
          Length = 532

 Score =  438 bits (1127), Expect = e-121
 Identities = 200/287 (69%), Positives = 243/287 (84%), Gaps = 4/287 (1%)
 Frame = -2

Query: 851 EKTNISHILFGIGGSVKTWKDRRHYSELWWKPNTTRGYVWLDEKPNENEPWLVNSPPYRV 672
           E T+ISHI+FGIGGS++TW+DR  YSELWW+PN TRG+VWL+E+P  N  WL  SPPY+V
Sbjct: 94  EATDISHIVFGIGGSIQTWRDRSRYSELWWRPNVTRGFVWLEEEPPLNMTWLPTSPPYQV 153

Query: 671 SEDTSKFKY----GSRSAIRIARIVLESFRLGNDNVRWFVLGDDDTVFFTENLIDVLSRY 504
           S DTS+F Y    GSRSAIR+ARI+ ESF LG  NVRWFV+GDDDTVFF +NL+ VL++Y
Sbjct: 154 SADTSRFNYTCWFGSRSAIRMARIIKESFGLGLTNVRWFVMGDDDTVFFVDNLVTVLNKY 213

Query: 503 DHNQMYYIGGNSESVEQDVVHSYGMAFGGGGMALSYPLVVQLVKLLDGCIHRYRYLYGSD 324
           DHNQMYYIGGNSESVEQD+VHSY MA+GGGG+A+SYPL V+LVK+LDGCI RY  LYGSD
Sbjct: 214 DHNQMYYIGGNSESVEQDIVHSYAMAYGGGGIAISYPLAVELVKILDGCIDRYASLYGSD 273

Query: 323 ERICACVAEIGVSVTKELGFHQFDIRDDPYGLLAAHPVAPLVSLHHLDYVKPLFPEKDRL 144
           ++I AC++EIGV +TKELGFHQ DIR +PYGLLAAHPVAPLV+LHHLDYV P+FP   ++
Sbjct: 274 QKIEACISEIGVPLTKELGFHQVDIRGNPYGLLAAHPVAPLVTLHHLDYVDPIFPATTQI 333

Query: 143 DSLRSLMGVYKMDPVRTLQHSFCYDLKQNWSVSISWGYTVQIYPTLL 3
           D+LR L+  YK DP R LQHSFC+D  ++W VS+SWGYT+QIYP+L+
Sbjct: 334 DALRRLVSAYKTDPRRILQHSFCHDPTRDWFVSVSWGYTIQIYPSLV 380


>ref|XP_002277889.1| PREDICTED: uncharacterized protein LOC100244414 [Vitis vinifera]
          Length = 582

 Score =  437 bits (1123), Expect = e-120
 Identities = 202/284 (71%), Positives = 234/284 (82%), Gaps = 1/284 (0%)
 Frame = -2

Query: 860 DRLEKTNISHILFGIGGSVKTWKDRRHYSELWWKPNTTRGYVWLDEKPNENEPWLVNSPP 681
           D L +TNISH+ FGI GSV TWKDRRHYSELWWKPN +RGYVWLD KP+   PW  +SPP
Sbjct: 83  DNLGETNISHVQFGIAGSVATWKDRRHYSELWWKPNVSRGYVWLDGKPDAAVPWPKSSPP 142

Query: 680 YRVSEDTSKFKYGS-RSAIRIARIVLESFRLGNDNVRWFVLGDDDTVFFTENLIDVLSRY 504
           YRVSED S+FKY S +SA+RIARIV ESFR+G  NVRWFV+GDDDTVFFTENL+ VL++Y
Sbjct: 143 YRVSEDWSRFKYSSSQSAVRIARIVSESFRVGLPNVRWFVMGDDDTVFFTENLVSVLAKY 202

Query: 503 DHNQMYYIGGNSESVEQDVVHSYGMAFGGGGMALSYPLVVQLVKLLDGCIHRYRYLYGSD 324
           DH Q+YYIG NSESVEQDV+HSYGMAFGGGG A+SY L  +L  +LDGC+ RY   YGSD
Sbjct: 203 DHRQVYYIGANSESVEQDVMHSYGMAFGGGGFAVSYGLAAKLATMLDGCLDRYYRFYGSD 262

Query: 323 ERICACVAEIGVSVTKELGFHQFDIRDDPYGLLAAHPVAPLVSLHHLDYVKPLFPEKDRL 144
           +RI ACV+EIGVS+T E GFHQ DIR DPYGLLAAHPVAPLVSLHH+D V P+FP    L
Sbjct: 263 QRIWACVSEIGVSLTAERGFHQMDIRGDPYGLLAAHPVAPLVSLHHIDAVSPMFPSHTHL 322

Query: 143 DSLRSLMGVYKMDPVRTLQHSFCYDLKQNWSVSISWGYTVQIYP 12
           DSL+SL   Y++DP R LQ SFCYD ++NWS+S+SWGYT Q+YP
Sbjct: 323 DSLKSLFRAYQVDPARILQQSFCYDHRRNWSISVSWGYTAQLYP 366


Top