BLASTX nr result

ID: Coptis21_contig00024044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024044
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320129.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002301355.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
emb|CBI16718.3| unnamed protein product [Vitis vinifera]               89   5e-16
ref|XP_002267542.1| PREDICTED: uncharacterized protein LOC100247...    89   5e-16
ref|XP_003552378.1| PREDICTED: uncharacterized protein LOC100798...    87   1e-15

>ref|XP_002320129.1| predicted protein [Populus trichocarpa] gi|222860902|gb|EEE98444.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 56/105 (53%), Positives = 70/105 (66%), Gaps = 7/105 (6%)
 Frame = -1

Query: 339 LKNTLSSLLTAQRPILIP-PSTSQPGI-----PDAGYSAESSKGPL-AEEDHEIAAKVTL 181
           LK T++SLL++QRP+L    S S PG      PD+G    SS+  L  EED + A K  L
Sbjct: 55  LKTTVASLLSSQRPVLRHFDSGSDPGSSGELNPDSGGQDTSSRAALLTEEDRKTAEKTHL 114

Query: 180 LNHKISSNISAMPSALKRMNDCNSMMEKLDTYNVNIHPAFKRKRT 46
           L  KISSN+SAMP  LKRM DC S ++KL +YN +IHPAFK+KRT
Sbjct: 115 LKEKISSNVSAMPVVLKRMEDCISKIDKLYSYNGSIHPAFKKKRT 159


>ref|XP_002301355.1| predicted protein [Populus trichocarpa] gi|222843081|gb|EEE80628.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 53/103 (51%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
 Frame = -1

Query: 339 LKNTLSSLLTAQRPILIP-PSTSQPG----IPDAGYSAESSKGPLAEEDHEIAAKVTLLN 175
           LK TL+ LL++QRPIL    S S PG    +   G    S    L +ED + A KV LL 
Sbjct: 58  LKTTLALLLSSQRPILPDCDSGSDPGPSGELNPGGQDKSSRAALLTKEDRKTAEKVHLLK 117

Query: 174 HKISSNISAMPSALKRMNDCNSMMEKLDTYNVNIHPAFKRKRT 46
            KISSN+S MP  LKRM DC S + KLD+YN +IHPAFK+K+T
Sbjct: 118 EKISSNVSTMPVVLKRMKDCISRINKLDSYNGSIHPAFKKKKT 160


>emb|CBI16718.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/102 (49%), Positives = 70/102 (68%), Gaps = 4/102 (3%)
 Frame = -1

Query: 339 LKNTLSSLLTAQRPILIP-PSTSQP---GIPDAGYSAESSKGPLAEEDHEIAAKVTLLNH 172
           LK T +S+L++QRP  +   S S+P   G P+ G     S+  LA+ DHE + K+ LL  
Sbjct: 16  LKATFTSILSSQRPPFLEFVSGSEPEASGEPNPG----QSRVLLAQGDHETSEKIQLLKQ 71

Query: 171 KISSNISAMPSALKRMNDCNSMMEKLDTYNVNIHPAFKRKRT 46
           KISSN+S +P  LKR+N+C SM++KLD+YN  +HPAFKR+RT
Sbjct: 72  KISSNVSTIPVLLKRLNECMSMVDKLDSYNGIMHPAFKRRRT 113


>ref|XP_002267542.1| PREDICTED: uncharacterized protein LOC100247850 [Vitis vinifera]
          Length = 146

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/102 (49%), Positives = 70/102 (68%), Gaps = 4/102 (3%)
 Frame = -1

Query: 339 LKNTLSSLLTAQRPILIP-PSTSQP---GIPDAGYSAESSKGPLAEEDHEIAAKVTLLNH 172
           LK T +S+L++QRP  +   S S+P   G P+ G     S+  LA+ DHE + K+ LL  
Sbjct: 48  LKATFTSILSSQRPPFLEFVSGSEPEASGEPNPG----QSRVLLAQGDHETSEKIQLLKQ 103

Query: 171 KISSNISAMPSALKRMNDCNSMMEKLDTYNVNIHPAFKRKRT 46
           KISSN+S +P  LKR+N+C SM++KLD+YN  +HPAFKR+RT
Sbjct: 104 KISSNVSTIPVLLKRLNECMSMVDKLDSYNGIMHPAFKRRRT 145


>ref|XP_003552378.1| PREDICTED: uncharacterized protein LOC100798294 [Glycine max]
          Length = 133

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 53/99 (53%), Positives = 61/99 (61%), Gaps = 1/99 (1%)
 Frame = -1

Query: 339 LKNTLSSLLTAQRPILIPPSTSQPGIPDAGYSAESSKGPLAEEDHEIAAKVTLLNHKISS 160
           L  TL S+L AQRP L       PG  +   S E S    A ED E A K+ LLN KISS
Sbjct: 42  LNATLRSILDAQRPFL------SPGTSEQNISREESSS--APEDPETAKKLKLLNEKISS 93

Query: 159 NISAMPSALKRMNDCNSMMEKLDTYNVN-IHPAFKRKRT 46
           N SAMP  LKRM DC + +EK D+YN + IHPAFKRK+T
Sbjct: 94  NCSAMPIVLKRMKDCIARIEKFDSYNDSMIHPAFKRKKT 132


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