BLASTX nr result

ID: Coptis21_contig00024038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024038
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521786.1| Disease resistance protein RPP13, putative [...   125   3e-27
ref|XP_002872017.1| predicted protein [Arabidopsis lyrata subsp....   125   4e-27
ref|XP_002891938.1| predicted protein [Arabidopsis lyrata subsp....   121   7e-26
ref|XP_002524237.1| Disease resistance protein RPP8, putative [R...   121   7e-26
gb|AGD98930.1| NBS type disease resistance protein [Malus x dome...   120   1e-25

>ref|XP_002521786.1| Disease resistance protein RPP13, putative [Ricinus communis]
            gi|223538999|gb|EEF40596.1| Disease resistance protein
            RPP13, putative [Ricinus communis]
          Length = 929

 Score =  125 bits (315), Expect = 3e-27
 Identities = 65/134 (48%), Positives = 91/134 (67%), Gaps = 1/134 (0%)
 Frame = +1

Query: 88   FPPTLINLTLHASQLEQDPMETLGKLPNLVSLKLQHNAYRGKGMVCTTKGFPRLQTFRLL 267
            F   L  L L  S+L +DPM TL KLPNL  L+LQ +++ G  MVC+ KGFP+L++  L 
Sbjct: 789  FSSNLAKLNLQGSKLLEDPMMTLEKLPNLRILRLQMDSFLGTLMVCSDKGFPQLKSLLLC 848

Query: 268  GLYELEEWTVVEGAMPTFIHLEIWDCKNLETLPDGLRFITSLQKLVIGLMPKEFKDRV-Q 444
             L  LE+W V EGAM    HLEI +C +++ +PDGLRFIT LQ++ I  M K FK R+ +
Sbjct: 849  DLPNLEDWKVEEGAMSNLCHLEISNCTSMKMVPDGLRFITCLQEMEIRSMLKAFKTRLEE 908

Query: 445  GEEELFKVRHIPSI 486
            G ++ +KV+H+PS+
Sbjct: 909  GGDDYYKVQHVPSV 922


>ref|XP_002872017.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317854|gb|EFH48276.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 926

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/137 (43%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
 Frame = +1

Query: 88   FPPTLINLTLHASQLEQDPMETLGKLPNLVSLKLQHNAYRGKGMVCTTKGFPRLQTFRLL 267
            FP  + +++L +  L +DPM  L KL NL  + L+ NA+ G+ MVC+  GFP+L T    
Sbjct: 785  FPSRIASISLSSCDLSEDPMPVLEKLHNLKIVSLELNAFTGRKMVCSKSGFPKLHTLEFS 844

Query: 268  GLYELEEWTVVEGAMPTFIHLEIWDCKNLETLPDGLRFITSLQKLVIGLMPKEFKDR-VQ 444
             L  LEEW V E +MP    LEI DC+ L++LPDGL++IT+L++L +G M  EFKD+ +Q
Sbjct: 845  ILDNLEEWVVEEESMPFLCRLEINDCRKLKSLPDGLKYITTLEELRVGWMQNEFKDKLIQ 904

Query: 445  GEEELFKVRHIPSITCY 495
            G ++ +K++H+ S+  Y
Sbjct: 905  GGDDHYKIQHVSSVVFY 921


>ref|XP_002891938.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297337780|gb|EFH68197.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 918

 Score =  121 bits (303), Expect = 7e-26
 Identities = 65/141 (46%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
 Frame = +1

Query: 67   EVHHPDVFPPTLINLTLHASQLEQDPMETLGKLPNLVSLKLQHNAYRGKGMVCTTKGFPR 246
            EV H   FP  L  +TL    LE+DPM  L KL  L  + L++ ++ GK MVC+  GFP+
Sbjct: 776  EVQH---FPSHLKTITLTECCLEEDPMPILEKLFQLKEVHLKYQSFCGKRMVCSGNGFPQ 832

Query: 247  LQTFRLLGLYELEEWTVVEGAMPTFIHLEIWDCKNLETLPDGLRFITSLQKLVIGLMPKE 426
            LQ   +  L E EEW V EG+MP    L IW C  L+ LPDG+R+ITSL++L IG+M  E
Sbjct: 833  LQFLSIFELKEWEEWIVEEGSMPLLHTLTIWSCGKLKELPDGMRYITSLKELYIGMMQTE 892

Query: 427  FKDRV-QGEEELFKVRHIPSI 486
            +K+R+ +   + +KV+HIPS+
Sbjct: 893  WKERLSERGADFYKVQHIPSV 913


>ref|XP_002524237.1| Disease resistance protein RPP8, putative [Ricinus communis]
            gi|223536514|gb|EEF38161.1| Disease resistance protein
            RPP8, putative [Ricinus communis]
          Length = 857

 Score =  121 bits (303), Expect = 7e-26
 Identities = 68/146 (46%), Positives = 91/146 (62%), Gaps = 5/146 (3%)
 Frame = +1

Query: 73   HHPDVFPPTLINLTLHASQLEQDPMETLGKLPNLVSLKLQHNAYRGKGMVCTTKGFPRLQ 252
            H  +  PP+L  LTL  SQL QDPM  L KLPNL  L L+   Y+G  MVC+  GFP+L+
Sbjct: 712  HSLEYLPPSLAKLTLCRSQLRQDPMPILEKLPNLRFLSLE-GTYKGPVMVCSAYGFPQLE 770

Query: 253  TFRLLGLYELEEWTVVEGAMPTFIHLEIWDCKNLETLPDGLRFITSLQKLVIGLMPKEFK 432
              +L  L +LEEW V EGAMP    L+I   + L T+P+GL+F+ +LQ+L +  MP+ F+
Sbjct: 771  VVKLGWLDKLEEWMVEEGAMPCLRTLDIDSLRELRTIPEGLKFVGTLQELNVRWMPEAFE 830

Query: 433  DRV-----QGEEELFKVRHIPSITCY 495
             R+     +  E+  KVRHIPSI  Y
Sbjct: 831  KRIRVINNEEGEDFDKVRHIPSIMFY 856


>gb|AGD98930.1| NBS type disease resistance protein [Malus x domestica]
          Length = 878

 Score =  120 bits (300), Expect = 1e-25
 Identities = 65/143 (45%), Positives = 92/143 (64%)
 Frame = +1

Query: 58   GRIEVHHPDVFPPTLINLTLHASQLEQDPMETLGKLPNLVSLKLQHNAYRGKGMVCTTKG 237
            G  ++ +P  FPP L  L LH S+LE +P+E L KLP L  L+L+H++YRGK +  +  G
Sbjct: 734  GISKLPNPHEFPPNLNQLILHQSRLENNPLEILEKLPYLFVLRLKHSSYRGKKLKFSANG 793

Query: 238  FPRLQTFRLLGLYELEEWTVVEGAMPTFIHLEIWDCKNLETLPDGLRFITSLQKLVIGLM 417
            FP+L+   L  L  LEE  V E AMP    L+I  C+ L  LP+ ++ +T+LQ+LV   M
Sbjct: 794  FPQLEYLELEFLDSLEELEVEESAMPKLRSLQITYCQKLRMLPEEIKSLTTLQELVFEGM 853

Query: 418  PKEFKDRVQGEEELFKVRHIPSI 486
            P+ F DR+QGE+   KV+H+PSI
Sbjct: 854  PRRFIDRLQGEDR-HKVQHVPSI 875


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