BLASTX nr result

ID: Coptis21_contig00024029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024029
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887828.1| At1g80460 [Arabidopsis lyrata subsp. lyrata]...   182   2e-44
ref|XP_002273367.1| PREDICTED: probable glycerol kinase isoform ...   182   3e-44
ref|XP_002327412.1| predicted protein [Populus trichocarpa] gi|2...   181   5e-44
ref|NP_001031307.1| glycerol kinase [Arabidopsis thaliana] gi|33...   181   7e-44
ref|NP_178161.1| glycerol kinase [Arabidopsis thaliana] gi|67307...   181   7e-44

>ref|XP_002887828.1| At1g80460 [Arabidopsis lyrata subsp. lyrata]
           gi|297333669|gb|EFH64087.1| At1g80460 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 522

 Score =  182 bits (463), Expect = 2e-44
 Identities = 85/108 (78%), Positives = 99/108 (91%)
 Frame = -3

Query: 325 MSKEGSFIGAIDQGTTSTRFIIYDHNAKAIGSHQVEFSQIYPEAGWVEHNPMEILESVRV 146
           M+KE  FIG+IDQGTTSTRFIIYDH+A+A+ SHQVEF+Q YPEAGWVEH+PMEILESV+V
Sbjct: 1   MAKENGFIGSIDQGTTSTRFIIYDHHARAVASHQVEFTQFYPEAGWVEHDPMEILESVKV 60

Query: 145 CMAKALDKAIVEGHNVDHGLKAIGVTNQRETTLVWSKSTGCPLYNAIV 2
           C+AKALDKA  +GHNVD GLKAIG+T+QRETT+VWSKSTG PL+ AIV
Sbjct: 61  CIAKALDKATADGHNVDGGLKAIGLTDQRETTVVWSKSTGLPLHKAIV 108


>ref|XP_002273367.1| PREDICTED: probable glycerol kinase isoform 1 [Vitis vinifera]
           gi|297743524|emb|CBI36391.3| unnamed protein product
           [Vitis vinifera]
          Length = 522

 Score =  182 bits (461), Expect = 3e-44
 Identities = 84/108 (77%), Positives = 98/108 (90%)
 Frame = -3

Query: 325 MSKEGSFIGAIDQGTTSTRFIIYDHNAKAIGSHQVEFSQIYPEAGWVEHNPMEILESVRV 146
           M+KE  F+G+IDQGTTSTRFIIYD +A+ +GSHQVEF+Q YPEAGWVEH+PMEILESVRV
Sbjct: 1   MAKEDVFVGSIDQGTTSTRFIIYDRSAQPVGSHQVEFTQFYPEAGWVEHDPMEILESVRV 60

Query: 145 CMAKALDKAIVEGHNVDHGLKAIGVTNQRETTLVWSKSTGCPLYNAIV 2
           C+ KA+DKA  +GHNVD GLKAIG+TNQRETTL+WSKSTG PLY+AIV
Sbjct: 61  CIEKAIDKATADGHNVDSGLKAIGLTNQRETTLIWSKSTGLPLYHAIV 108


>ref|XP_002327412.1| predicted protein [Populus trichocarpa] gi|222835966|gb|EEE74387.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score =  181 bits (459), Expect = 5e-44
 Identities = 84/107 (78%), Positives = 98/107 (91%)
 Frame = -3

Query: 322 SKEGSFIGAIDQGTTSTRFIIYDHNAKAIGSHQVEFSQIYPEAGWVEHNPMEILESVRVC 143
           +KE +FIG+IDQGT+STRFIIYD N++ +GSHQVEF+Q+YP+AGWVEH+PMEILESV+VC
Sbjct: 4   TKEAAFIGSIDQGTSSTRFIIYDRNSRCVGSHQVEFTQLYPQAGWVEHDPMEILESVKVC 63

Query: 142 MAKALDKAIVEGHNVDHGLKAIGVTNQRETTLVWSKSTGCPLYNAIV 2
           MAKA+D A  EGHNVD  LKAIG+TNQRETTLVWSKSTG PLYNAIV
Sbjct: 64  MAKAVDNASAEGHNVDAALKAIGLTNQRETTLVWSKSTGRPLYNAIV 110


>ref|NP_001031307.1| glycerol kinase [Arabidopsis thaliana] gi|332198287|gb|AEE36408.1|
           glycerol kinase [Arabidopsis thaliana]
          Length = 482

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/108 (77%), Positives = 98/108 (90%)
 Frame = -3

Query: 325 MSKEGSFIGAIDQGTTSTRFIIYDHNAKAIGSHQVEFSQIYPEAGWVEHNPMEILESVRV 146
           M+KE  FIG+IDQGTTSTRFIIYDH+A+ + SHQVEF+Q YPEAGWVEH+PMEILESV+V
Sbjct: 1   MAKENGFIGSIDQGTTSTRFIIYDHDARPVASHQVEFTQFYPEAGWVEHDPMEILESVKV 60

Query: 145 CMAKALDKAIVEGHNVDHGLKAIGVTNQRETTLVWSKSTGCPLYNAIV 2
           C+AKALDKA  +GHNVD GLKAIG+T+QRETT+VWSKSTG PL+ AIV
Sbjct: 61  CIAKALDKATADGHNVDGGLKAIGLTDQRETTVVWSKSTGLPLHKAIV 108


>ref|NP_178161.1| glycerol kinase [Arabidopsis thaliana]
           gi|6730733|gb|AAF27123.1|AC018849_11 putative glycerol
           kinase; 69575-71670 [Arabidopsis thaliana]
           gi|30314022|gb|AAO61418.1| glycerol kinase [Arabidopsis
           thaliana] gi|222423040|dbj|BAH19502.1| AT1G80460
           [Arabidopsis thaliana] gi|332198286|gb|AEE36407.1|
           glycerol kinase [Arabidopsis thaliana]
          Length = 522

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/108 (77%), Positives = 98/108 (90%)
 Frame = -3

Query: 325 MSKEGSFIGAIDQGTTSTRFIIYDHNAKAIGSHQVEFSQIYPEAGWVEHNPMEILESVRV 146
           M+KE  FIG+IDQGTTSTRFIIYDH+A+ + SHQVEF+Q YPEAGWVEH+PMEILESV+V
Sbjct: 1   MAKENGFIGSIDQGTTSTRFIIYDHDARPVASHQVEFTQFYPEAGWVEHDPMEILESVKV 60

Query: 145 CMAKALDKAIVEGHNVDHGLKAIGVTNQRETTLVWSKSTGCPLYNAIV 2
           C+AKALDKA  +GHNVD GLKAIG+T+QRETT+VWSKSTG PL+ AIV
Sbjct: 61  CIAKALDKATADGHNVDGGLKAIGLTDQRETTVVWSKSTGLPLHKAIV 108


Top