BLASTX nr result

ID: Coptis21_contig00024027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024027
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530120.1| Leucine-rich repeat receptor protein kinase ...    68   9e-10
ref|XP_002303717.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002299384.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003524132.1| PREDICTED: LRR receptor-like serine/threonin...    65   4e-09
ref|XP_002265191.2| PREDICTED: LRR receptor-like serine/threonin...    65   8e-09

>ref|XP_002530120.1| Leucine-rich repeat receptor protein kinase EXS precursor, putative
           [Ricinus communis] gi|223530374|gb|EEF32264.1|
           Leucine-rich repeat receptor protein kinase EXS
           precursor, putative [Ricinus communis]
          Length = 1257

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/78 (46%), Positives = 48/78 (61%)
 Frame = -3

Query: 285 MAKQLFYAAFVLCLLIGFSFEFVLCKNKPPRVHHETDSDITLKALLEVKKSFVADPMNQL 106
           +AK++   A  L LL+ F F FV+C+       H+      L  LLEVKKSF+ DP N L
Sbjct: 3   LAKEVL--AVFLVLLLSFLFGFVVCQT------HD------LSVLLEVKKSFIDDPENIL 48

Query: 105 KDWSQKNPSFCSWSGVTC 52
            DW++ NP+FC+W GVTC
Sbjct: 49  HDWNESNPNFCTWRGVTC 66


>ref|XP_002303717.1| predicted protein [Populus trichocarpa] gi|222841149|gb|EEE78696.1|
           predicted protein [Populus trichocarpa]
          Length = 1254

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/83 (44%), Positives = 47/83 (56%)
 Frame = -3

Query: 300 LTLPKMAKQLFYAAFVLCLLIGFSFEFVLCKNKPPRVHHETDSDITLKALLEVKKSFVAD 121
           + +PK    LF A     LL  FSF FVLC+N+             L +LLEVKKSF  D
Sbjct: 1   MAVPKRVLLLFAA-----LLFCFSFGFVLCQNQE------------LSSLLEVKKSFEGD 43

Query: 120 PMNQLKDWSQKNPSFCSWSGVTC 52
           P   L DW++ NP+FC+W+GV C
Sbjct: 44  PEKVLLDWNESNPNFCTWTGVIC 66


>ref|XP_002299384.1| predicted protein [Populus trichocarpa] gi|222846642|gb|EEE84189.1|
           predicted protein [Populus trichocarpa]
          Length = 1253

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 36/81 (44%), Positives = 46/81 (56%)
 Frame = -3

Query: 294 LPKMAKQLFYAAFVLCLLIGFSFEFVLCKNKPPRVHHETDSDITLKALLEVKKSFVADPM 115
           +PK    LF A     +L+ FSF FVLC+N+             L  LLEVKKSF  DP 
Sbjct: 3   VPKQVLLLFVA-----ILVCFSFGFVLCQNQE------------LSVLLEVKKSFEGDPE 45

Query: 114 NQLKDWSQKNPSFCSWSGVTC 52
             L DW++ NP+ C+W+GVTC
Sbjct: 46  KVLHDWNESNPNSCTWTGVTC 66


>ref|XP_003524132.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           GSO1-like [Glycine max]
          Length = 1268

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/63 (50%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
 Frame = -3

Query: 234 FSFEFVLCKNKPPRVHHE--TDSDITLKALLEVKKSFVADPMNQLKDWSQKNPSFCSWSG 61
           F+  F+LC +    V  +  +DS+ TL+ LLEVKKSFV DP N L DWS+ N  +CSW G
Sbjct: 7   FAIVFLLCFSSMLLVLGQVNSDSESTLRVLLEVKKSFVEDPQNVLGDWSEDNTDYCSWRG 66

Query: 60  VTC 52
           V+C
Sbjct: 67  VSC 69


>ref|XP_002265191.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           GSO1-like [Vitis vinifera]
          Length = 1254

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/80 (40%), Positives = 47/80 (58%)
 Frame = -3

Query: 285 MAKQLFYAAFVLCLLIGFSFEFVLCKNKPPRVHHETDSDITLKALLEVKKSFVADPMNQL 106
           M K++ +   ++ L+   S  +VLCK          + + TL+ LLE+K+SF  DP N L
Sbjct: 3   MLKRIVWVTVIVALMCLSSGYYVLCK----------EEEETLRILLEIKESFEEDPQNVL 52

Query: 105 KDWSQKNPSFCSWSGVTCSE 46
            +WS  NPSFCSW  V+CS+
Sbjct: 53  DEWSVDNPSFCSWRRVSCSD 72


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