BLASTX nr result
ID: Coptis21_contig00024025
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024025 (512 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricin... 66 3e-09 ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [... 64 1e-08 ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [... 64 1e-08 ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [... 63 3e-08 >ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis] gi|223549848|gb|EEF51336.1| Polygalacturonase precursor, putative [Ricinus communis] Length = 446 Score = 65.9 bits (159), Expect = 3e-09 Identities = 32/39 (82%), Positives = 35/39 (89%) Frame = -2 Query: 511 RRGGTVLYIP*GVFLTWGFNLTSRMTLYLSKGAVIKATQ 395 RRGGT+LYIP GVFLT FNLTS MTLYL++GAVIKATQ Sbjct: 73 RRGGTLLYIPPGVFLTGSFNLTSHMTLYLARGAVIKATQ 111 >ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|222841984|gb|EEE79531.1| predicted protein [Populus trichocarpa] Length = 412 Score = 64.3 bits (155), Expect = 1e-08 Identities = 31/39 (79%), Positives = 35/39 (89%) Frame = -2 Query: 511 RRGGTVLYIP*GVFLTWGFNLTSRMTLYLSKGAVIKATQ 395 RRGGT+LYIP GV+LT FNLTS MTLYL++GAVIKATQ Sbjct: 39 RRGGTLLYIPPGVYLTESFNLTSHMTLYLARGAVIKATQ 77 >ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max] Length = 474 Score = 63.9 bits (154), Expect = 1e-08 Identities = 31/39 (79%), Positives = 34/39 (87%) Frame = -2 Query: 511 RRGGTVLYIP*GVFLTWGFNLTSRMTLYLSKGAVIKATQ 395 RRGGTVLY+P GV+LT FNLTS MTLYL+ GAVIKATQ Sbjct: 104 RRGGTVLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQ 142 >ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max] Length = 442 Score = 63.9 bits (154), Expect = 1e-08 Identities = 31/39 (79%), Positives = 34/39 (87%) Frame = -2 Query: 511 RRGGTVLYIP*GVFLTWGFNLTSRMTLYLSKGAVIKATQ 395 RRGGTVLY+P GV+LT FNLTS MTLYL+ GAVIKATQ Sbjct: 72 RRGGTVLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQ 110 >ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus] gi|449501789|ref|XP_004161459.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus] Length = 445 Score = 62.8 bits (151), Expect = 3e-08 Identities = 31/39 (79%), Positives = 34/39 (87%) Frame = -2 Query: 511 RRGGTVLYIP*GVFLTWGFNLTSRMTLYLSKGAVIKATQ 395 RRGGT+LYIP GV+LT FNLTS MTLYL+KGAVIKA Q Sbjct: 72 RRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQ 110