BLASTX nr result

ID: Coptis21_contig00024025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024025
         (512 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricin...    66   3e-09
ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [...    64   1e-08
ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [...    64   1e-08
ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [...    63   3e-08

>ref|XP_002509949.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223549848|gb|EEF51336.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 446

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = -2

Query: 511 RRGGTVLYIP*GVFLTWGFNLTSRMTLYLSKGAVIKATQ 395
           RRGGT+LYIP GVFLT  FNLTS MTLYL++GAVIKATQ
Sbjct: 73  RRGGTLLYIPPGVFLTGSFNLTSHMTLYLARGAVIKATQ 111


>ref|XP_002304552.1| predicted protein [Populus trichocarpa] gi|222841984|gb|EEE79531.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -2

Query: 511 RRGGTVLYIP*GVFLTWGFNLTSRMTLYLSKGAVIKATQ 395
           RRGGT+LYIP GV+LT  FNLTS MTLYL++GAVIKATQ
Sbjct: 39  RRGGTLLYIPPGVYLTESFNLTSHMTLYLARGAVIKATQ 77


>ref|XP_003530711.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 474

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = -2

Query: 511 RRGGTVLYIP*GVFLTWGFNLTSRMTLYLSKGAVIKATQ 395
           RRGGTVLY+P GV+LT  FNLTS MTLYL+ GAVIKATQ
Sbjct: 104 RRGGTVLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQ 142


>ref|XP_003551949.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 442

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = -2

Query: 511 RRGGTVLYIP*GVFLTWGFNLTSRMTLYLSKGAVIKATQ 395
           RRGGTVLY+P GV+LT  FNLTS MTLYL+ GAVIKATQ
Sbjct: 72  RRGGTVLYVPPGVYLTESFNLTSHMTLYLAAGAVIKATQ 110


>ref|XP_004143871.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
           gi|449501789|ref|XP_004161459.1| PREDICTED: probable
           polygalacturonase-like [Cucumis sativus]
          Length = 445

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/39 (79%), Positives = 34/39 (87%)
 Frame = -2

Query: 511 RRGGTVLYIP*GVFLTWGFNLTSRMTLYLSKGAVIKATQ 395
           RRGGT+LYIP GV+LT  FNLTS MTLYL+KGAVIKA Q
Sbjct: 72  RRGGTLLYIPPGVYLTETFNLTSHMTLYLAKGAVIKAVQ 110


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