BLASTX nr result

ID: Coptis21_contig00024022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024022
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281459.1| PREDICTED: uncharacterized protein LOC100257...    72   4e-11
emb|CBI20724.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002309466.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09
dbj|BAJ87667.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07
dbj|BAJ89776.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07

>ref|XP_002281459.1| PREDICTED: uncharacterized protein LOC100257849 [Vitis vinifera]
          Length = 228

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/56 (66%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
 Frame = -1

Query: 389 LFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSSADEFRS--HLWLYIAIVYIAL 228
           LFS+G S SSFVLDGGVAK   PGCFSGAND CSSAD++     LW Y A + IAL
Sbjct: 168 LFSNGKSNSSFVLDGGVAKISKPGCFSGANDQCSSADDWSQTRRLWPYAAGLLIAL 223


>emb|CBI20724.3| unnamed protein product [Vitis vinifera]
          Length = 957

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = -1

Query: 389 LFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSSADEF 273
           LFS+G S SSFVLDGGVAK   PGCFSGAND CSSAD++
Sbjct: 168 LFSNGKSNSSFVLDGGVAKISKPGCFSGANDQCSSADDW 206


>ref|XP_002309466.1| predicted protein [Populus trichocarpa] gi|222855442|gb|EEE92989.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
 Frame = -1

Query: 389 LFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSSADEF-RS-HLWLYIAIVYIALA 225
           LFS+G   SSF L+GG AK   PGCFSGAND CSSA+++ RS  LW YIA  +IA A
Sbjct: 163 LFSNGTRNSSFTLEGGEAKITKPGCFSGANDVCSSANDWPRSITLWSYIATAFIAAA 219


>dbj|BAJ87667.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 197

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = -1

Query: 389 LFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSSADEFRSHLWLYIAIVYIALA 225
           L S+G   SSF ++GGV KT HPGCFSG ND+CS A       W  ++ +  ALA
Sbjct: 138 LLSNGKPNSSFTVEGGVPKTAHPGCFSGNNDECSGAISTGVTAWTLVSAILFALA 192


>dbj|BAJ89776.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 219

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = -1

Query: 389 LFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSSADEFRSHLWLYIAIVYIALA 225
           L S+G   SSF ++GGV KT HPGCFSG ND+CS A       W  ++ +  ALA
Sbjct: 160 LLSNGKPNSSFTVEGGVPKTAHPGCFSGNNDECSGAISTGVTAWTLVSAILFALA 214


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