BLASTX nr result
ID: Coptis21_contig00024022
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00024022 (389 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281459.1| PREDICTED: uncharacterized protein LOC100257... 72 4e-11 emb|CBI20724.3| unnamed protein product [Vitis vinifera] 66 3e-09 ref|XP_002309466.1| predicted protein [Populus trichocarpa] gi|2... 65 7e-09 dbj|BAJ87667.1| predicted protein [Hordeum vulgare subsp. vulgare] 60 2e-07 dbj|BAJ89776.1| predicted protein [Hordeum vulgare subsp. vulgare] 60 2e-07 >ref|XP_002281459.1| PREDICTED: uncharacterized protein LOC100257849 [Vitis vinifera] Length = 228 Score = 72.4 bits (176), Expect = 4e-11 Identities = 37/56 (66%), Positives = 41/56 (73%), Gaps = 2/56 (3%) Frame = -1 Query: 389 LFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSSADEFRS--HLWLYIAIVYIAL 228 LFS+G S SSFVLDGGVAK PGCFSGAND CSSAD++ LW Y A + IAL Sbjct: 168 LFSNGKSNSSFVLDGGVAKISKPGCFSGANDQCSSADDWSQTRRLWPYAAGLLIAL 223 >emb|CBI20724.3| unnamed protein product [Vitis vinifera] Length = 957 Score = 66.2 bits (160), Expect = 3e-09 Identities = 30/39 (76%), Positives = 33/39 (84%) Frame = -1 Query: 389 LFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSSADEF 273 LFS+G S SSFVLDGGVAK PGCFSGAND CSSAD++ Sbjct: 168 LFSNGKSNSSFVLDGGVAKISKPGCFSGANDQCSSADDW 206 >ref|XP_002309466.1| predicted protein [Populus trichocarpa] gi|222855442|gb|EEE92989.1| predicted protein [Populus trichocarpa] Length = 224 Score = 64.7 bits (156), Expect = 7e-09 Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 2/57 (3%) Frame = -1 Query: 389 LFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSSADEF-RS-HLWLYIAIVYIALA 225 LFS+G SSF L+GG AK PGCFSGAND CSSA+++ RS LW YIA +IA A Sbjct: 163 LFSNGTRNSSFTLEGGEAKITKPGCFSGANDVCSSANDWPRSITLWSYIATAFIAAA 219 >dbj|BAJ87667.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 197 Score = 60.1 bits (144), Expect = 2e-07 Identities = 27/55 (49%), Positives = 34/55 (61%) Frame = -1 Query: 389 LFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSSADEFRSHLWLYIAIVYIALA 225 L S+G SSF ++GGV KT HPGCFSG ND+CS A W ++ + ALA Sbjct: 138 LLSNGKPNSSFTVEGGVPKTAHPGCFSGNNDECSGAISTGVTAWTLVSAILFALA 192 >dbj|BAJ89776.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 219 Score = 60.1 bits (144), Expect = 2e-07 Identities = 27/55 (49%), Positives = 34/55 (61%) Frame = -1 Query: 389 LFSSGNSTSSFVLDGGVAKTQHPGCFSGANDDCSSADEFRSHLWLYIAIVYIALA 225 L S+G SSF ++GGV KT HPGCFSG ND+CS A W ++ + ALA Sbjct: 160 LLSNGKPNSSFTVEGGVPKTAHPGCFSGNNDECSGAISTGVTAWTLVSAILFALA 214