BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024011
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [...   201   7e-50
emb|CBI39422.3| unnamed protein product [Vitis vinifera]              201   7e-50
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [...   199   3e-49
ref|XP_003601731.1| DNA topoisomerase [Medicago truncatula] gi|3...   193   1e-47
ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47

>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
          Length = 894

 Score =  201 bits (510), Expect = 7e-50
 Identities = 100/120 (83%), Positives = 108/120 (90%)
 Frame = -3

Query: 364 IMPWLAVDEKNLPNLAKGEKMKISKVELYEGNASPPDYLSESELISLMEKNGIGTDASIP 185
           IMPWLAV+EKNLP   KGEK+++SKVELYEG  SPPDYLSESELISLMEKNGIGTDASIP
Sbjct: 477 IMPWLAVNEKNLPQFKKGEKIEVSKVELYEGETSPPDYLSESELISLMEKNGIGTDASIP 536

Query: 184 VYINNICERIFVQVHAGRRLVPTTLGITLIRGNQTIYLDLCLPDIRSFIEQQITLIAKGQ 5
           V+INNICER FVQV AGR+LVPT LGI+LIRG Q I  DLCLPDIRSFIEQQITL+AKGQ
Sbjct: 537 VHINNICERNFVQVQAGRKLVPTALGISLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQ 596


>emb|CBI39422.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  201 bits (510), Expect = 7e-50
 Identities = 100/120 (83%), Positives = 108/120 (90%)
 Frame = -3

Query: 364 IMPWLAVDEKNLPNLAKGEKMKISKVELYEGNASPPDYLSESELISLMEKNGIGTDASIP 185
           IMPWLAV+EKNLP   KGEK+++SKVELYEG  SPPDYLSESELISLMEKNGIGTDASIP
Sbjct: 493 IMPWLAVNEKNLPQFKKGEKIEVSKVELYEGETSPPDYLSESELISLMEKNGIGTDASIP 552

Query: 184 VYINNICERIFVQVHAGRRLVPTTLGITLIRGNQTIYLDLCLPDIRSFIEQQITLIAKGQ 5
           V+INNICER FVQV AGR+LVPT LGI+LIRG Q I  DLCLPDIRSFIEQQITL+AKGQ
Sbjct: 553 VHINNICERNFVQVQAGRKLVPTALGISLIRGYQCIDPDLCLPDIRSFIEQQITLVAKGQ 612


>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
          Length = 863

 Score =  199 bits (505), Expect = 3e-49
 Identities = 95/120 (79%), Positives = 112/120 (93%)
 Frame = -3

Query: 364 IMPWLAVDEKNLPNLAKGEKMKISKVELYEGNASPPDYLSESELISLMEKNGIGTDASIP 185
           IMPWLA+++KN+P+  KG+K+++SK+ELYEG+ SPPD+L+ESELISLMEKNGIGTDASIP
Sbjct: 447 IMPWLAINDKNIPSFIKGQKIEVSKLELYEGSTSPPDFLTESELISLMEKNGIGTDASIP 506

Query: 184 VYINNICERIFVQVHAGRRLVPTTLGITLIRGNQTIYLDLCLPDIRSFIEQQITLIAKGQ 5
           V+INNICER +VQV AGR+LVPTTLGITL+RG QTI  DLCLPDIRSFIEQQITLIAKGQ
Sbjct: 507 VHINNICERNYVQVQAGRKLVPTTLGITLVRGYQTIDPDLCLPDIRSFIEQQITLIAKGQ 566


>ref|XP_003601731.1| DNA topoisomerase [Medicago truncatula] gi|355490779|gb|AES71982.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 1024

 Score =  193 bits (491), Expect = 1e-47
 Identities = 93/120 (77%), Positives = 111/120 (92%)
 Frame = -3

Query: 364 IMPWLAVDEKNLPNLAKGEKMKISKVELYEGNASPPDYLSESELISLMEKNGIGTDASIP 185
           IMPWLA+++K+LP+  +G+K+K+SKVELYEG+ +PPD+L+ESELISLMEKNGIGTDASIP
Sbjct: 598 IMPWLAINDKSLPSFEEGQKIKLSKVELYEGSTTPPDFLTESELISLMEKNGIGTDASIP 657

Query: 184 VYINNICERIFVQVHAGRRLVPTTLGITLIRGNQTIYLDLCLPDIRSFIEQQITLIAKGQ 5
           V+INNICER +VQV AGR+L PTTLGITL+RG Q+I  DLCLPDIRSFIEQQITLIAKGQ
Sbjct: 658 VHINNICERNYVQVQAGRKLSPTTLGITLVRGYQSIDPDLCLPDIRSFIEQQITLIAKGQ 717


>ref|XP_002321105.1| predicted protein [Populus trichocarpa] gi|222861878|gb|EEE99420.1|
           predicted protein [Populus trichocarpa]
          Length = 837

 Score =  193 bits (491), Expect = 1e-47
 Identities = 96/121 (79%), Positives = 106/121 (87%)
 Frame = -3

Query: 364 IMPWLAVDEKNLPNLAKGEKMKISKVELYEGNASPPDYLSESELISLMEKNGIGTDASIP 185
           IMPWLAV EKNLP  AKG+K+++SKVEL+EG   PPDYLSESELISLMEKNGIGTDASI 
Sbjct: 422 IMPWLAVSEKNLPQFAKGDKIEVSKVELFEGQTVPPDYLSESELISLMEKNGIGTDASIS 481

Query: 184 VYINNICERIFVQVHAGRRLVPTTLGITLIRGNQTIYLDLCLPDIRSFIEQQITLIAKGQ 5
           V+INNICER +VQV AGR+LVPT LGITLIRG Q I  DLCLPDIR FIEQQITL+AKG+
Sbjct: 482 VHINNICERNYVQVQAGRKLVPTALGITLIRGYQCIDPDLCLPDIRGFIEQQITLVAKGE 541

Query: 4   A 2
           A
Sbjct: 542 A 542