BLASTX nr result

ID: Coptis21_contig00024010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024010
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141249.1| PREDICTED: 26S proteasome non-ATPase regulat...    87   7e-15
ref|XP_002302444.1| predicted protein [Populus trichocarpa] gi|2...    87   7e-15
gb|ABK95816.1| unknown [Populus trichocarpa]                           87   7e-15
gb|AAM64349.1| 26S proteasome non-ATPase regulatory subunit [Ara...    87   9e-15
ref|XP_003593794.1| 26S proteasome non-ATPase regulatory subunit...    87   9e-15

>ref|XP_004141249.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 14-like
           [Cucumis sativus] gi|449498695|ref|XP_004160608.1|
           PREDICTED: 26S proteasome non-ATPase regulatory subunit
           14-like [Cucumis sativus]
          Length = 309

 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 45/67 (67%), Positives = 51/67 (76%)
 Frame = +2

Query: 83  RSLIHGLNMHYYSINIISGRMNEFEGKMLLNLHRNKWTVGLTLRRFDTHSKINKQAVQPI 262
           ++LIHGLN HYYSI  I+ R NE E KMLLNLH+ KWT GLTLRRFDTHSK N+Q VQ +
Sbjct: 190 QALIHGLNRHYYSI-AINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEM 248

Query: 263 *YLAYCY 283
             LA  Y
Sbjct: 249 LNLAIKY 255


>ref|XP_002302444.1| predicted protein [Populus trichocarpa] gi|222844170|gb|EEE81717.1|
           predicted protein [Populus trichocarpa]
          Length = 309

 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 45/67 (67%), Positives = 51/67 (76%)
 Frame = +2

Query: 83  RSLIHGLNMHYYSINIISGRMNEFEGKMLLNLHRNKWTVGLTLRRFDTHSKINKQAVQPI 262
           ++LIHGLN HYYSI  I+ R NE E KMLLNLH+ KWT GLTLRRFDTHSK N+Q VQ +
Sbjct: 190 QALIHGLNRHYYSI-AINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEM 248

Query: 263 *YLAYCY 283
             LA  Y
Sbjct: 249 LSLAIKY 255


>gb|ABK95816.1| unknown [Populus trichocarpa]
          Length = 312

 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 45/67 (67%), Positives = 51/67 (76%)
 Frame = +2

Query: 83  RSLIHGLNMHYYSINIISGRMNEFEGKMLLNLHRNKWTVGLTLRRFDTHSKINKQAVQPI 262
           ++LIHGLN HYYSI  I+ R NE E KMLLNLH+ KWT GLTLRRFDTHSK N+Q VQ +
Sbjct: 193 QALIHGLNRHYYSI-AINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEM 251

Query: 263 *YLAYCY 283
             LA  Y
Sbjct: 252 LSLAIKY 258


>gb|AAM64349.1| 26S proteasome non-ATPase regulatory subunit [Arabidopsis thaliana]
          Length = 308

 Score = 86.7 bits (213), Expect = 9e-15
 Identities = 45/67 (67%), Positives = 51/67 (76%)
 Frame = +2

Query: 83  RSLIHGLNMHYYSINIISGRMNEFEGKMLLNLHRNKWTVGLTLRRFDTHSKINKQAVQPI 262
           ++LIHGLN HYYSI  I+ R NE E KMLLNLH+ KWT GLTLRRFDTHSK N+Q VQ +
Sbjct: 189 QALIHGLNRHYYSI-AINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEM 247

Query: 263 *YLAYCY 283
             LA  Y
Sbjct: 248 LSLAAKY 254


>ref|XP_003593794.1| 26S proteasome non-ATPase regulatory subunit [Medicago truncatula]
           gi|355482842|gb|AES64045.1| 26S proteasome non-ATPase
           regulatory subunit [Medicago truncatula]
           gi|388503354|gb|AFK39743.1| unknown [Medicago
           truncatula]
          Length = 309

 Score = 86.7 bits (213), Expect = 9e-15
 Identities = 45/67 (67%), Positives = 51/67 (76%)
 Frame = +2

Query: 83  RSLIHGLNMHYYSINIISGRMNEFEGKMLLNLHRNKWTVGLTLRRFDTHSKINKQAVQPI 262
           ++LIHGLN HYYSI  I+ R NE E KMLLNLH+ KWT GLTLRRFDTHSK N+Q VQ +
Sbjct: 190 QALIHGLNRHYYSI-AINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEM 248

Query: 263 *YLAYCY 283
             LA  Y
Sbjct: 249 LSLATKY 255


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