BLASTX nr result

ID: Coptis21_contig00024007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024007
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16334.3| unnamed protein product [Vitis vinifera]              188   4e-46
ref|XP_002282467.2| PREDICTED: receptor-like serine/threonine-pr...   185   3e-45
ref|XP_002314286.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-42
ref|XP_002328308.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39
ref|XP_002529929.1| kinase, putative [Ricinus communis] gi|22353...   160   1e-37

>emb|CBI16334.3| unnamed protein product [Vitis vinifera]
          Length = 635

 Score =  188 bits (477), Expect = 4e-46
 Identities = 91/172 (52%), Positives = 113/172 (65%), Gaps = 3/172 (1%)
 Frame = +1

Query: 7   SSINKWTCSCASAHQGNRTNAVGANCTSSCDCSP--GEDNGDIWTCICGAEGVNKGPGSI 180
           S+INKWTC+C+SA+QG++   +  NC++SCDCSP  G   GD WTCIC A+G  K     
Sbjct: 30  SNINKWTCTCSSANQGSQNYILAGNCSTSCDCSPAGGGSTGDRWTCICAADGFPKVASDS 89

Query: 181 QDTSCFASCNCTSG-PFGEPKASKKHVSNKYIVYIXXXXXXXXXXXXXXXXGCYIYRRDK 357
             TSCF +CNCTSG P  +  A +KH+S+K +V I                 CY+YR++K
Sbjct: 90  GHTSCFTACNCTSGSPNEDAPARRKHISSKVVVIILLLCVVLTTFAFLASVLCYVYRKEK 149

Query: 358 CPVQPPIFSSDKYTSCNSATNLISHGSASVPEFGVKINSHINPLTGCIKRAS 513
           CP+QPP+FSSDK TSCNSATNLISH   SVPE  V I S IN LTGC  +AS
Sbjct: 150 CPIQPPVFSSDKETSCNSATNLISHKINSVPESRVDIGSPINSLTGCFHKAS 201


>ref|XP_002282467.2| PREDICTED: receptor-like serine/threonine-protein kinase NCRK-like
           [Vitis vinifera]
          Length = 628

 Score =  185 bits (470), Expect = 3e-45
 Identities = 89/170 (52%), Positives = 111/170 (65%), Gaps = 3/170 (1%)
 Frame = +1

Query: 13  INKWTCSCASAHQGNRTNAVGANCTSSCDCSP--GEDNGDIWTCICGAEGVNKGPGSIQD 186
           +NKWTC+C+SA+QG++   +  NC++SCDCSP  G   GD WTCIC A+G  K       
Sbjct: 25  LNKWTCTCSSANQGSQNYILAGNCSTSCDCSPAGGGSTGDRWTCICAADGFPKVASDSGH 84

Query: 187 TSCFASCNCTSG-PFGEPKASKKHVSNKYIVYIXXXXXXXXXXXXXXXXGCYIYRRDKCP 363
           TSCF +CNCTSG P  +  A +KH+S+K +V I                 CY+YR++KCP
Sbjct: 85  TSCFTACNCTSGSPNEDAPARRKHISSKVVVIILLLCVVLTTFAFLASVLCYVYRKEKCP 144

Query: 364 VQPPIFSSDKYTSCNSATNLISHGSASVPEFGVKINSHINPLTGCIKRAS 513
           +QPP+FSSDK TSCNSATNLISH   SVPE  V I S IN LTGC  +AS
Sbjct: 145 IQPPVFSSDKETSCNSATNLISHKINSVPESRVDIGSPINSLTGCFHKAS 194


>ref|XP_002314286.1| predicted protein [Populus trichocarpa] gi|222850694|gb|EEE88241.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score =  177 bits (448), Expect = 1e-42
 Identities = 80/170 (47%), Positives = 118/170 (69%)
 Frame = +1

Query: 7   SSINKWTCSCASAHQGNRTNAVGANCTSSCDCSPGEDNGDIWTCICGAEGVNKGPGSIQD 186
           S INKWTC+C++++QGN++  + +NC++SCDCSPG   G +WTC C ++G+ K    IQD
Sbjct: 23  SGINKWTCTCSASYQGNQSY-IKSNCSTSCDCSPGMPGG-MWTCTCSSDGLPKVATGIQD 80

Query: 187 TSCFASCNCTSGPFGEPKASKKHVSNKYIVYIXXXXXXXXXXXXXXXXGCYIYRRDKCPV 366
           T+CF +CNCTSG +   + ++KH S+K ++ I                 CY+YR+DKC V
Sbjct: 81  TTCFTACNCTSGTWFLWQYTRKHFSSKIVLVILLLCVILTTLAFLASITCYLYRKDKCLV 140

Query: 367 QPPIFSSDKYTSCNSATNLISHGSASVPEFGVKINSHINPLTGCIKRASF 516
           Q P+F SD+  SCNSATNLISH ++SV E  ++++S INP++GC ++ASF
Sbjct: 141 QSPVFLSDRERSCNSATNLISHRASSVSETKIRVDSPINPISGCFRKASF 190


>ref|XP_002328308.1| predicted protein [Populus trichocarpa] gi|222837823|gb|EEE76188.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/168 (44%), Positives = 112/168 (66%)
 Frame = +1

Query: 13  INKWTCSCASAHQGNRTNAVGANCTSSCDCSPGEDNGDIWTCICGAEGVNKGPGSIQDTS 192
           IN WTC+C++++QGN++    +NC++SCDC+  +  G  WTC C  +G+ K     QDT+
Sbjct: 2   INNWTCTCSASYQGNQSYTK-SNCSTSCDCTGRQSRGT-WTCTCSTDGLPKVAAGSQDTT 59

Query: 193 CFASCNCTSGPFGEPKASKKHVSNKYIVYIXXXXXXXXXXXXXXXXGCYIYRRDKCPVQP 372
           CF +CNCTSG   + +A++KH+S+K +V I                  Y+ R+DKCP+Q 
Sbjct: 60  CFTACNCTSGSLTDAQATRKHISSKIVVVILLCVILTTLAFLASTTW-YLCRKDKCPIQS 118

Query: 373 PIFSSDKYTSCNSATNLISHGSASVPEFGVKINSHINPLTGCIKRASF 516
           P F SD+ TSCNSATNLISH ++SV E  ++++S INP++GC ++ASF
Sbjct: 119 PTFLSDRETSCNSATNLISHRASSVSETKIRVDSPINPISGCFRKASF 166


>ref|XP_002529929.1| kinase, putative [Ricinus communis] gi|223530559|gb|EEF32437.1|
           kinase, putative [Ricinus communis]
          Length = 625

 Score =  160 bits (405), Expect = 1e-37
 Identities = 73/170 (42%), Positives = 104/170 (61%), Gaps = 2/170 (1%)
 Frame = +1

Query: 13  INKWTCSCASAHQGNRTNAVGANCTSSCDCSP--GEDNGDIWTCICGAEGVNKGPGSIQD 186
           +N WTC+C+ + QGN+T  V +NC++SCDC+P  G      W C C A+G+ +      D
Sbjct: 25  LNNWTCTCSLSSQGNQTY-VKSNCSTSCDCNPVAGGSKDSTWGCTCAADGLPRIASGSHD 83

Query: 187 TSCFASCNCTSGPFGEPKASKKHVSNKYIVYIXXXXXXXXXXXXXXXXGCYIYRRDKCPV 366
           ++CF +CNCTSG   + +  +KH S K +V I                 CY+YR+D CP 
Sbjct: 84  STCFTACNCTSGSVAQAQEKRKHFSGKVVVIILLLCVILTTLAFLASITCYVYRKDNCPF 143

Query: 367 QPPIFSSDKYTSCNSATNLISHGSASVPEFGVKINSHINPLTGCIKRASF 516
           Q PIF SD+ TS  SATNLISH ++S+ E GV I++H+NP+ GC +RA +
Sbjct: 144 QSPIFISDRETSYTSATNLISHKASSLLETGVSIDTHLNPMPGCFRRAFY 193


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