BLASTX nr result

ID: Coptis21_contig00024006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00024006
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276882.1| PREDICTED: serine/threonine-protein kinase U...   192   2e-47
ref|XP_002312715.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-46
ref|XP_002516858.1| ATP binding protein, putative [Ricinus commu...   186   1e-45
ref|XP_002873912.1| EMB3013 [Arabidopsis lyrata subsp. lyrata] g...   186   2e-45
ref|NP_197371.2| Protein kinase family protein with ARM repeat d...   184   9e-45

>ref|XP_002276882.1| PREDICTED: serine/threonine-protein kinase ULK4-like [Vitis vinifera]
          Length = 1368

 Score =  192 bits (489), Expect = 2e-47
 Identities = 98/114 (85%), Positives = 105/114 (92%)
 Frame = -2

Query: 347  LYPIFIEDEDPIPMYAQKLLVMLIEFNYIRILDILDSKTVSQCFEFLLGDLSSANVSNVK 168
            LYP  IEDEDPIPMYAQKLLVM IEFNYIRI DIL  +TVSQCFEFLLGDLSSANV++VK
Sbjct: 1087 LYPTLIEDEDPIPMYAQKLLVMFIEFNYIRIPDILHMETVSQCFEFLLGDLSSANVNSVK 1146

Query: 167  LCLALASAPEMETKILSQLRVVRKIGNLLEFVKAKDMEDFLELTLDLCKAFLVR 6
            LCLALASAPEMETK+LSQL+VVRKIGNLLEFV AKDMEDFLE TL LC+AFL+R
Sbjct: 1147 LCLALASAPEMETKLLSQLKVVRKIGNLLEFVNAKDMEDFLEPTLGLCRAFLLR 1200


>ref|XP_002312715.1| predicted protein [Populus trichocarpa] gi|222852535|gb|EEE90082.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  187 bits (476), Expect = 6e-46
 Identities = 94/113 (83%), Positives = 106/113 (93%)
 Frame = -2

Query: 347 LYPIFIEDEDPIPMYAQKLLVMLIEFNYIRILDILDSKTVSQCFEFLLGDLSSANVSNVK 168
           LYP FIEDEDPIPMYAQKLLVMLIE++YI+I DIL  KTVSQCFEFLLGDLSSANV+NV+
Sbjct: 29  LYPTFIEDEDPIPMYAQKLLVMLIEYDYIKISDILHLKTVSQCFEFLLGDLSSANVNNVQ 88

Query: 167 LCLALASAPEMETKILSQLRVVRKIGNLLEFVKAKDMEDFLELTLDLCKAFLV 9
           LCLA+ASAPEME+K+LSQL+VVR+IGNLLEFV AKDMEDFLE TL LC+AFL+
Sbjct: 89  LCLAMASAPEMESKLLSQLKVVRRIGNLLEFVCAKDMEDFLEPTLGLCRAFLL 141


>ref|XP_002516858.1| ATP binding protein, putative [Ricinus communis]
            gi|223543946|gb|EEF45472.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 1267

 Score =  186 bits (473), Expect = 1e-45
 Identities = 94/113 (83%), Positives = 104/113 (92%)
 Frame = -2

Query: 347  LYPIFIEDEDPIPMYAQKLLVMLIEFNYIRILDILDSKTVSQCFEFLLGDLSSANVSNVK 168
            LYP  IEDEDPIPMYAQKLLVMLIEF+YI+I DIL  KTVSQCFEFLLGDLSSANV+NVK
Sbjct: 987  LYPTLIEDEDPIPMYAQKLLVMLIEFDYIKISDILHLKTVSQCFEFLLGDLSSANVNNVK 1046

Query: 167  LCLALASAPEMETKILSQLRVVRKIGNLLEFVKAKDMEDFLELTLDLCKAFLV 9
            LCLALASAPEM+ K+LSQL+VVR++GNLLEFV AKDMEDFLE TL LC+AFL+
Sbjct: 1047 LCLALASAPEMDHKLLSQLKVVRRVGNLLEFVYAKDMEDFLEPTLGLCRAFLL 1099


>ref|XP_002873912.1| EMB3013 [Arabidopsis lyrata subsp. lyrata]
            gi|297319749|gb|EFH50171.1| EMB3013 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1366

 Score =  186 bits (471), Expect = 2e-45
 Identities = 92/114 (80%), Positives = 104/114 (91%)
 Frame = -2

Query: 347  LYPIFIEDEDPIPMYAQKLLVMLIEFNYIRILDILDSKTVSQCFEFLLGDLSSANVSNVK 168
            LYP  I+DEDPIP YAQKLLVML+EF+YI+I ++L   TVSQCFEFLLGDLSSANV+NVK
Sbjct: 1080 LYPALIQDEDPIPAYAQKLLVMLVEFDYIKISNLLHHNTVSQCFEFLLGDLSSANVNNVK 1139

Query: 167  LCLALASAPEMETKILSQLRVVRKIGNLLEFVKAKDMEDFLELTLDLCKAFLVR 6
            LCLALASAPEMETK+LSQL+VVR+IGNLLEFV AKDMEDFLE TL LC+AFL+R
Sbjct: 1140 LCLALASAPEMETKLLSQLKVVRRIGNLLEFVNAKDMEDFLEPTLSLCRAFLLR 1193


>ref|NP_197371.2| Protein kinase family protein with ARM repeat domain [Arabidopsis
            thaliana] gi|332005217|gb|AED92600.1| Protein kinase
            family protein with ARM repeat domain [Arabidopsis
            thaliana]
          Length = 1366

 Score =  184 bits (466), Expect = 9e-45
 Identities = 91/114 (79%), Positives = 104/114 (91%)
 Frame = -2

Query: 347  LYPIFIEDEDPIPMYAQKLLVMLIEFNYIRILDILDSKTVSQCFEFLLGDLSSANVSNVK 168
            LYP  I+DEDPIP YAQKLLVML+EF+YI+I ++L   TVSQCFEFLLGDLSSANV+NVK
Sbjct: 1080 LYPALIQDEDPIPAYAQKLLVMLVEFDYIKISNLLRHNTVSQCFEFLLGDLSSANVNNVK 1139

Query: 167  LCLALASAPEMETKILSQLRVVRKIGNLLEFVKAKDMEDFLELTLDLCKAFLVR 6
            LCLALASAPEME+K+LSQL+VVR+IGNLLEFV AKDMEDFLE TL LC+AFL+R
Sbjct: 1140 LCLALASAPEMESKLLSQLKVVRRIGNLLEFVNAKDMEDFLEPTLSLCRAFLLR 1193


Top