BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023992
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   176   4e-42
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-lik...   168   1e-39
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   166   4e-39
ref|XP_002331109.1| predicted protein [Populus trichocarpa] gi|2...   166   5e-39
dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] g...   166   7e-39

>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
           gi|297739525|emb|CBI29707.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  176 bits (447), Expect = 4e-42
 Identities = 92/145 (63%), Positives = 105/145 (72%), Gaps = 12/145 (8%)
 Frame = -3

Query: 654 QANSPIRTLDELNVSEIVSTPYFPSITERGQAISLEQ------------DQPKISYSYVT 511
           QA SPIRTLDEL VSE++ TPYFPSITER Q    E+            D P  +     
Sbjct: 237 QAKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRL 296

Query: 510 EGLRTSGGNEFGQRKRHRCFVITARTRAFLYHQVRLLVGVLKCVGTGDLTTNDVEGILNA 331
           +G     G  FG R+RHRCF++TAR R+FLYHQVRLLVGV+KCVGTGDLT +DVE ILNA
Sbjct: 297 DGFN-GAGQGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNA 355

Query: 330 KTITAASPMAPACGLYLGNVKYELP 256
           KT+TAASPMAPACGLYLGNV Y+LP
Sbjct: 356 KTVTAASPMAPACGLYLGNVNYDLP 380


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max]
          Length = 369

 Score =  168 bits (425), Expect = 1e-39
 Identities = 86/144 (59%), Positives = 106/144 (73%), Gaps = 11/144 (7%)
 Frame = -3

Query: 654 QANSPIRTLDELNVSEIVSTPYFPSITERGQ-----------AISLEQDQPKISYSYVTE 508
           QA SPIRTLDEL+V+E++ +PYFPS+ +R Q           + + E D P IS   + +
Sbjct: 224 QAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSNNTETDIPPISNPSIDK 283

Query: 507 GLRTSGGNEFGQRKRHRCFVITARTRAFLYHQVRLLVGVLKCVGTGDLTTNDVEGILNAK 328
            + +S    FG+R+RHRC V+TAR R+FLYHQVRLLVGVLK  GTG+LT  DVE ILNAK
Sbjct: 284 VITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPDVERILNAK 343

Query: 327 TITAASPMAPACGLYLGNVKYELP 256
           T+TAASPMAPACGLYLG VKY+LP
Sbjct: 344 TVTAASPMAPACGLYLGEVKYDLP 367


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
           gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  166 bits (421), Expect = 4e-39
 Identities = 86/144 (59%), Positives = 105/144 (72%), Gaps = 11/144 (7%)
 Frame = -3

Query: 654 QANSPIRTLDELNVSEIVSTPYFPSITERGQAISL-----------EQDQPKISYSYVTE 508
           QA SPIRTLDEL+V+E++ +PYFPS+ +R Q   +           E D P  S   + +
Sbjct: 225 QAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIPPTSNPSIDK 284

Query: 507 GLRTSGGNEFGQRKRHRCFVITARTRAFLYHQVRLLVGVLKCVGTGDLTTNDVEGILNAK 328
            + +S    FG+R+RHRC V+TAR RAFLYHQVRLLVGVLK VGTG+LT  DVE ILNA+
Sbjct: 285 VMASSQDVGFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAR 344

Query: 327 TITAASPMAPACGLYLGNVKYELP 256
           T+TAASPMAPACGLYLG VKY+LP
Sbjct: 345 TVTAASPMAPACGLYLGEVKYDLP 368


>ref|XP_002331109.1| predicted protein [Populus trichocarpa] gi|222872837|gb|EEF09968.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  166 bits (420), Expect = 5e-39
 Identities = 89/144 (61%), Positives = 105/144 (72%), Gaps = 13/144 (9%)
 Frame = -3

Query: 654 QANSPIRTLDELNVSEIVSTPYFPSITERGQAISLEQD--------QPKISYSYVTEGLR 499
           QA SP RTL+EL+V E+VSTPYFPSITER Q  S  +         +  +    ++ G  
Sbjct: 181 QAKSPFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLPTGSISNGFM 240

Query: 498 TSGGNE-----FGQRKRHRCFVITARTRAFLYHQVRLLVGVLKCVGTGDLTTNDVEGILN 334
             G N      FG R+RHRC+VITAR+R+FLYHQVRLLVGVLK VGTGDLT +DVE ILN
Sbjct: 241 AGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILN 300

Query: 333 AKTITAASPMAPACGLYLGNVKYE 262
           A++ITAASPMAPACGLYLG+VKYE
Sbjct: 301 ARSITAASPMAPACGLYLGHVKYE 324


>dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana]
           gi|51971573|dbj|BAD44451.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 368

 Score =  166 bits (419), Expect = 7e-39
 Identities = 84/144 (58%), Positives = 108/144 (75%), Gaps = 11/144 (7%)
 Frame = -3

Query: 654 QANSPIRTLDELNVSEIVSTPYFPSITER-------GQAISLEQDQPKISYSYVTEGLR- 499
           QA SP+R+LDELN++E+ STPYFPSITER       G  ++   +QPK   + VT  +  
Sbjct: 226 QAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACS-NQPKSETAGVTTNVGE 284

Query: 498 ---TSGGNEFGQRKRHRCFVITARTRAFLYHQVRLLVGVLKCVGTGDLTTNDVEGILNAK 328
              ++GG+ FG+R+RHRC+V+TAR+R FLYHQVRL+VG LKCVGTG+LT +DVE IL AK
Sbjct: 285 VEGSTGGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAK 344

Query: 327 TITAASPMAPACGLYLGNVKYELP 256
           T++AA PMAPA GLYL  V+YE P
Sbjct: 345 TVSAAKPMAPASGLYLARVRYEFP 368