BLASTX nr result
ID: Coptis21_contig00023992
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023992 (761 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi... 176 4e-42 ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-lik... 168 1e-39 ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin... 166 4e-39 ref|XP_002331109.1| predicted protein [Populus trichocarpa] gi|2... 166 5e-39 dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] g... 166 7e-39 >ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera] gi|297739525|emb|CBI29707.3| unnamed protein product [Vitis vinifera] Length = 380 Score = 176 bits (447), Expect = 4e-42 Identities = 92/145 (63%), Positives = 105/145 (72%), Gaps = 12/145 (8%) Frame = -3 Query: 654 QANSPIRTLDELNVSEIVSTPYFPSITERGQAISLEQ------------DQPKISYSYVT 511 QA SPIRTLDEL VSE++ TPYFPSITER Q E+ D P + Sbjct: 237 QAKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVPDSPSTANHDRL 296 Query: 510 EGLRTSGGNEFGQRKRHRCFVITARTRAFLYHQVRLLVGVLKCVGTGDLTTNDVEGILNA 331 +G G FG R+RHRCF++TAR R+FLYHQVRLLVGV+KCVGTGDLT +DVE ILNA Sbjct: 297 DGFN-GAGQGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERILNA 355 Query: 330 KTITAASPMAPACGLYLGNVKYELP 256 KT+TAASPMAPACGLYLGNV Y+LP Sbjct: 356 KTVTAASPMAPACGLYLGNVNYDLP 380 >ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase A-like [Glycine max] Length = 369 Score = 168 bits (425), Expect = 1e-39 Identities = 86/144 (59%), Positives = 106/144 (73%), Gaps = 11/144 (7%) Frame = -3 Query: 654 QANSPIRTLDELNVSEIVSTPYFPSITERGQ-----------AISLEQDQPKISYSYVTE 508 QA SPIRTLDEL+V+E++ +PYFPS+ +R Q + + E D P IS + + Sbjct: 224 QAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSNNTETDIPPISNPSIDK 283 Query: 507 GLRTSGGNEFGQRKRHRCFVITARTRAFLYHQVRLLVGVLKCVGTGDLTTNDVEGILNAK 328 + +S FG+R+RHRC V+TAR R+FLYHQVRLLVGVLK GTG+LT DVE ILNAK Sbjct: 284 VITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPDVERILNAK 343 Query: 327 TITAASPMAPACGLYLGNVKYELP 256 T+TAASPMAPACGLYLG VKY+LP Sbjct: 344 TVTAASPMAPACGLYLGEVKYDLP 367 >ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max] gi|255637177|gb|ACU18919.1| unknown [Glycine max] Length = 370 Score = 166 bits (421), Expect = 4e-39 Identities = 86/144 (59%), Positives = 105/144 (72%), Gaps = 11/144 (7%) Frame = -3 Query: 654 QANSPIRTLDELNVSEIVSTPYFPSITERGQAISL-----------EQDQPKISYSYVTE 508 QA SPIRTLDEL+V+E++ +PYFPS+ +R Q + E D P S + + Sbjct: 225 QAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIPPTSNPSIDK 284 Query: 507 GLRTSGGNEFGQRKRHRCFVITARTRAFLYHQVRLLVGVLKCVGTGDLTTNDVEGILNAK 328 + +S FG+R+RHRC V+TAR RAFLYHQVRLLVGVLK VGTG+LT DVE ILNA+ Sbjct: 285 VMASSQDVGFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAR 344 Query: 327 TITAASPMAPACGLYLGNVKYELP 256 T+TAASPMAPACGLYLG VKY+LP Sbjct: 345 TVTAASPMAPACGLYLGEVKYDLP 368 >ref|XP_002331109.1| predicted protein [Populus trichocarpa] gi|222872837|gb|EEF09968.1| predicted protein [Populus trichocarpa] Length = 326 Score = 166 bits (420), Expect = 5e-39 Identities = 89/144 (61%), Positives = 105/144 (72%), Gaps = 13/144 (9%) Frame = -3 Query: 654 QANSPIRTLDELNVSEIVSTPYFPSITERGQAISLEQD--------QPKISYSYVTEGLR 499 QA SP RTL+EL+V E+VSTPYFPSITER Q S + + + ++ G Sbjct: 181 QAKSPFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGPHSFHNKCKTGLPTGSISNGFM 240 Query: 498 TSGGNE-----FGQRKRHRCFVITARTRAFLYHQVRLLVGVLKCVGTGDLTTNDVEGILN 334 G N FG R+RHRC+VITAR+R+FLYHQVRLLVGVLK VGTGDLT +DVE ILN Sbjct: 241 AGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILN 300 Query: 333 AKTITAASPMAPACGLYLGNVKYE 262 A++ITAASPMAPACGLYLG+VKYE Sbjct: 301 ARSITAASPMAPACGLYLGHVKYE 324 >dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] gi|51971573|dbj|BAD44451.1| unnamed protein product [Arabidopsis thaliana] Length = 368 Score = 166 bits (419), Expect = 7e-39 Identities = 84/144 (58%), Positives = 108/144 (75%), Gaps = 11/144 (7%) Frame = -3 Query: 654 QANSPIRTLDELNVSEIVSTPYFPSITER-------GQAISLEQDQPKISYSYVTEGLR- 499 QA SP+R+LDELN++E+ STPYFPSITER G ++ +QPK + VT + Sbjct: 226 QAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACS-NQPKSETAGVTTNVGE 284 Query: 498 ---TSGGNEFGQRKRHRCFVITARTRAFLYHQVRLLVGVLKCVGTGDLTTNDVEGILNAK 328 ++GG+ FG+R+RHRC+V+TAR+R FLYHQVRL+VG LKCVGTG+LT +DVE IL AK Sbjct: 285 VEGSTGGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVGTGELTVSDVERILEAK 344 Query: 327 TITAASPMAPACGLYLGNVKYELP 256 T++AA PMAPA GLYL V+YE P Sbjct: 345 TVSAAKPMAPASGLYLARVRYEFP 368