BLASTX nr result

ID: Coptis21_contig00023985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023985
         (480 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002308712.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002283360.2| PREDICTED: uncharacterized protein LOC100244...   100   2e-19
emb|CAN79215.1| hypothetical protein VITISV_025941 [Vitis vinifera]   100   2e-19
ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806...    98   6e-19

>ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|222865773|gb|EEF02904.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/86 (61%), Positives = 71/86 (82%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LGSLSNKWAGGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNELVPP 180
           LGSLS+KW GGIVLHL +VTRTDFTNLWL ILIRN LRF+T+ LIFL+PKGDQ ++L+PP
Sbjct: 419 LGSLSSKWGGGIVLHLFHVTRTDFTNLWLAILIRNFLRFATIGLIFLVPKGDQEDDLIPP 478

Query: 181 DLLSQGSTLNM-EEGLQLVSVNKKTQ 255
           D+L+  S  ++ ++GL+L  V + ++
Sbjct: 479 DILTANSDASLDDDGLELAPVKETSE 504


>ref|XP_002308712.1| predicted protein [Populus trichocarpa] gi|222854688|gb|EEE92235.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/86 (59%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
 Frame = +1

Query: 1   LGSLSNKWAGGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNELVPP 180
           LG+LS+KW GG++LHL +VTRTDFTNLWLVILIRN LRF+TL LIFL+P+GDQ++ L+P 
Sbjct: 385 LGALSSKWGGGVLLHLFHVTRTDFTNLWLVILIRNFLRFATLGLIFLVPRGDQADSLIPS 444

Query: 181 DLLSQGSTLNM-EEGLQLVSVNKKTQ 255
           D+L+  S  ++ ++GL+LV V + ++
Sbjct: 445 DVLTANSAASLDDDGLELVPVKETSE 470


>ref|XP_002283360.2| PREDICTED: uncharacterized protein LOC100244119 [Vitis vinifera]
           gi|296082148|emb|CBI21153.3| unnamed protein product
           [Vitis vinifera]
          Length = 518

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/73 (63%), Positives = 62/73 (84%)
 Frame = +1

Query: 1   LGSLSNKWAGGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNELVPP 180
           LGSLS+KWAGG+VLHLL+VTR+DFTNLWLV+LIRN+LR +TL LIFL+P   QS+E++  
Sbjct: 433 LGSLSSKWAGGMVLHLLHVTRSDFTNLWLVVLIRNILRLATLGLIFLVPNVGQSDEVISS 492

Query: 181 DLLSQGSTLNMEE 219
           D L+  S+++ E+
Sbjct: 493 DFLNDTSSVSEED 505


>emb|CAN79215.1| hypothetical protein VITISV_025941 [Vitis vinifera]
          Length = 242

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/73 (63%), Positives = 62/73 (84%)
 Frame = +1

Query: 1   LGSLSNKWAGGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNELVPP 180
           LGSLS+KWAGG+VLHLL+VTR+DFTNLWLV+LIRN+LR +TL LIFL+P   QS+E++  
Sbjct: 157 LGSLSSKWAGGMVLHLLHVTRSDFTNLWLVVLIRNILRLATLGLIFLVPNVGQSDEVISS 216

Query: 181 DLLSQGSTLNMEE 219
           D L+  S+++ E+
Sbjct: 217 DFLNDTSSVSEED 229


>ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806186 [Glycine max]
          Length = 523

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 44/88 (50%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
 Frame = +1

Query: 1   LGSLSNKWAGGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNELVPP 180
           +G+L ++W GG++L +L++TRTDFTNLWL +LIR++LRF+TL+L+FL+PK DQ  EL+P 
Sbjct: 436 IGALLSRWGGGVLLRVLHITRTDFTNLWLAVLIRDMLRFATLALVFLVPKTDQYEELLPF 495

Query: 181 DLLSQGST--LNMEEGLQLVSVNKKTQV 258
           ++  + ++  ++ EE L+LV +N KT+V
Sbjct: 496 EVSGKNTSDKVDEEETLELVPINGKTEV 523


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