BLASTX nr result
ID: Coptis21_contig00023985
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023985 (480 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|2... 115 4e-24 ref|XP_002308712.1| predicted protein [Populus trichocarpa] gi|2... 112 4e-23 ref|XP_002283360.2| PREDICTED: uncharacterized protein LOC100244... 100 2e-19 emb|CAN79215.1| hypothetical protein VITISV_025941 [Vitis vinifera] 100 2e-19 ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806... 98 6e-19 >ref|XP_002324339.1| predicted protein [Populus trichocarpa] gi|222865773|gb|EEF02904.1| predicted protein [Populus trichocarpa] Length = 519 Score = 115 bits (288), Expect = 4e-24 Identities = 53/86 (61%), Positives = 71/86 (82%), Gaps = 1/86 (1%) Frame = +1 Query: 1 LGSLSNKWAGGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNELVPP 180 LGSLS+KW GGIVLHL +VTRTDFTNLWL ILIRN LRF+T+ LIFL+PKGDQ ++L+PP Sbjct: 419 LGSLSSKWGGGIVLHLFHVTRTDFTNLWLAILIRNFLRFATIGLIFLVPKGDQEDDLIPP 478 Query: 181 DLLSQGSTLNM-EEGLQLVSVNKKTQ 255 D+L+ S ++ ++GL+L V + ++ Sbjct: 479 DILTANSDASLDDDGLELAPVKETSE 504 >ref|XP_002308712.1| predicted protein [Populus trichocarpa] gi|222854688|gb|EEE92235.1| predicted protein [Populus trichocarpa] Length = 479 Score = 112 bits (279), Expect = 4e-23 Identities = 51/86 (59%), Positives = 72/86 (83%), Gaps = 1/86 (1%) Frame = +1 Query: 1 LGSLSNKWAGGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNELVPP 180 LG+LS+KW GG++LHL +VTRTDFTNLWLVILIRN LRF+TL LIFL+P+GDQ++ L+P Sbjct: 385 LGALSSKWGGGVLLHLFHVTRTDFTNLWLVILIRNFLRFATLGLIFLVPRGDQADSLIPS 444 Query: 181 DLLSQGSTLNM-EEGLQLVSVNKKTQ 255 D+L+ S ++ ++GL+LV V + ++ Sbjct: 445 DVLTANSAASLDDDGLELVPVKETSE 470 >ref|XP_002283360.2| PREDICTED: uncharacterized protein LOC100244119 [Vitis vinifera] gi|296082148|emb|CBI21153.3| unnamed protein product [Vitis vinifera] Length = 518 Score = 99.8 bits (247), Expect = 2e-19 Identities = 46/73 (63%), Positives = 62/73 (84%) Frame = +1 Query: 1 LGSLSNKWAGGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNELVPP 180 LGSLS+KWAGG+VLHLL+VTR+DFTNLWLV+LIRN+LR +TL LIFL+P QS+E++ Sbjct: 433 LGSLSSKWAGGMVLHLLHVTRSDFTNLWLVVLIRNILRLATLGLIFLVPNVGQSDEVISS 492 Query: 181 DLLSQGSTLNMEE 219 D L+ S+++ E+ Sbjct: 493 DFLNDTSSVSEED 505 >emb|CAN79215.1| hypothetical protein VITISV_025941 [Vitis vinifera] Length = 242 Score = 99.8 bits (247), Expect = 2e-19 Identities = 46/73 (63%), Positives = 62/73 (84%) Frame = +1 Query: 1 LGSLSNKWAGGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNELVPP 180 LGSLS+KWAGG+VLHLL+VTR+DFTNLWLV+LIRN+LR +TL LIFL+P QS+E++ Sbjct: 157 LGSLSSKWAGGMVLHLLHVTRSDFTNLWLVVLIRNILRLATLGLIFLVPNVGQSDEVISS 216 Query: 181 DLLSQGSTLNMEE 219 D L+ S+++ E+ Sbjct: 217 DFLNDTSSVSEED 229 >ref|XP_003545404.1| PREDICTED: uncharacterized protein LOC100806186 [Glycine max] Length = 523 Score = 98.2 bits (243), Expect = 6e-19 Identities = 44/88 (50%), Positives = 71/88 (80%), Gaps = 2/88 (2%) Frame = +1 Query: 1 LGSLSNKWAGGIVLHLLNVTRTDFTNLWLVILIRNLLRFSTLSLIFLIPKGDQSNELVPP 180 +G+L ++W GG++L +L++TRTDFTNLWL +LIR++LRF+TL+L+FL+PK DQ EL+P Sbjct: 436 IGALLSRWGGGVLLRVLHITRTDFTNLWLAVLIRDMLRFATLALVFLVPKTDQYEELLPF 495 Query: 181 DLLSQGST--LNMEEGLQLVSVNKKTQV 258 ++ + ++ ++ EE L+LV +N KT+V Sbjct: 496 EVSGKNTSDKVDEEETLELVPINGKTEV 523