BLASTX nr result

ID: Coptis21_contig00023979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023979
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis]         121   5e-26
gb|ABD47739.1| pectate lyase [Eucalyptus globulus subsp. globulus]    121   7e-26
dbj|BAM05613.1| pectate lyase, partial [Eucalyptus globulus subs...   121   7e-26
dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa]         120   1e-25
ref|XP_002534016.1| Pectate lyase precursor, putative [Ricinus c...   118   6e-25

>dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis]
          Length = 333

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/116 (51%), Positives = 80/116 (68%), Gaps = 4/116 (3%)
 Frame = -3

Query: 340 NAKEVTARMDTDKSEWSKWNWRTDGDIMVNGAFFVPSGDGLGVKYALASSLEPRSAGLID 161
           +AK+VT R+DT++++W+ WNWRT+GDIMVNGAFFVPSG GL  +Y+ ASSLEP+SAGLID
Sbjct: 178 DAKQVTKRVDTEENDWTDWNWRTEGDIMVNGAFFVPSGVGLSAQYSKASSLEPKSAGLID 237

Query: 160 QLTMNAGVFGDSNGDHNVNPSPY----XXXXXXXXXXXXXXXXXGDPNYYGMIYGS 5
           QLTMNAGVFGD   +  ++   +                     G+ +Y+GMI+GS
Sbjct: 238 QLTMNAGVFGDPRDNSGISNPGFSGTGTTTATTADGGGGNGSNGGESDYFGMIFGS 293


>gb|ABD47739.1| pectate lyase [Eucalyptus globulus subsp. globulus]
          Length = 338

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/116 (51%), Positives = 79/116 (68%), Gaps = 4/116 (3%)
 Frame = -3

Query: 340 NAKEVTARMDTDKSEWSKWNWRTDGDIMVNGAFFVPSGDGLGVKYALASSLEPRSAGLID 161
           +AK+VT R+DT+++EW+ WNWRT+GDIMVNGA+FVPSG GL  +Y+ ASSLEP+SAGLID
Sbjct: 184 DAKQVTKRVDTEETEWTDWNWRTEGDIMVNGAYFVPSGVGLSAQYSKASSLEPKSAGLID 243

Query: 160 QLTMNAGVFGDSNGDHNVNPSPY----XXXXXXXXXXXXXXXXXGDPNYYGMIYGS 5
           QLT+NAGVFGD      ++   +                     GD +Y+GMI+GS
Sbjct: 244 QLTLNAGVFGDPRDTSGISNPGFSGAGTTTATTADGGGGNGSNGGDSDYFGMIFGS 299


>dbj|BAM05613.1| pectate lyase, partial [Eucalyptus globulus subsp. globulus]
          Length = 324

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/116 (51%), Positives = 79/116 (68%), Gaps = 4/116 (3%)
 Frame = -3

Query: 340 NAKEVTARMDTDKSEWSKWNWRTDGDIMVNGAFFVPSGDGLGVKYALASSLEPRSAGLID 161
           +AK+VT R+DT++++W+ WNWRT+GDIMVNGAFFVPSG GL  +Y+ ASSLEP+SAGLID
Sbjct: 178 DAKQVTKRVDTEENDWADWNWRTEGDIMVNGAFFVPSGVGLSAQYSKASSLEPKSAGLID 237

Query: 160 QLTMNAGVFGDSNGDHNVNPSPY----XXXXXXXXXXXXXXXXXGDPNYYGMIYGS 5
           QLT+NAGVFGD      ++   +                     GD +Y+GMI+GS
Sbjct: 238 QLTLNAGVFGDPRDTSGISNPGFSGAGTTTATTADGGGGNGSNGGDSDYFGMIFGS 293


>dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa]
          Length = 334

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/116 (50%), Positives = 80/116 (68%), Gaps = 4/116 (3%)
 Frame = -3

Query: 340 NAKEVTARMDTDKSEWSKWNWRTDGDIMVNGAFFVPSGDGLGVKYALASSLEPRSAGLID 161
           +AK+VT R+DT+++EW+ WNWRT+GD+MVNGA+FVPSG GL  +Y+ ASSLEP+SAGLID
Sbjct: 180 DAKQVTKRVDTEENEWTDWNWRTEGDMMVNGAYFVPSGVGLSAQYSKASSLEPKSAGLID 239

Query: 160 QLTMNAGVFGDSNGDHNVNPSPY----XXXXXXXXXXXXXXXXXGDPNYYGMIYGS 5
           QLTMNAGVFGD   +  ++   +                     G+ +Y+GMI+GS
Sbjct: 240 QLTMNAGVFGDPRDNSGISNPGFSGTGTTTATTADGGGGNGSNGGESDYFGMIFGS 295


>ref|XP_002534016.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223525981|gb|EEF28369.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 503

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/115 (51%), Positives = 78/115 (67%), Gaps = 3/115 (2%)
 Frame = -3

Query: 340 NAKEVTARMDTDKSEWSKWNWRTDGDIMVNGAFFVPSGDGLGVKYALASSLEPRSAGLID 161
           NAKEVT R++TD+ +W+ WNWRTDGD+++NGAFFVPSG GL  +YA ASS+EP+SA LI 
Sbjct: 344 NAKEVTKRVETDEKDWADWNWRTDGDVLINGAFFVPSGAGLSAQYAKASSVEPKSAALIT 403

Query: 160 QLTMNAGVFGDS-NGDHNVNPSPY--XXXXXXXXXXXXXXXXXGDPNYYGMIYGS 5
           QLT+NAGVFGD+   D  ++   +                   GD +Y+GMI+GS
Sbjct: 404 QLTLNAGVFGDARERDEGISNPGFIGGGTTTGTTNTGSAGSTGGDGDYFGMIFGS 458


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