BLASTX nr result

ID: Coptis21_contig00023964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023964
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264091.1| PREDICTED: putative deoxyribonuclease TATDN1...    95   5e-35
ref|NP_190807.3| TatD related DNase [Arabidopsis thaliana] gi|29...    94   3e-33
ref|NP_001241560.1| uncharacterized protein LOC100814321 [Glycin...    89   6e-33
ref|NP_974418.1| TatD related DNase [Arabidopsis thaliana] gi|33...    94   1e-31
ref|XP_004136520.1| PREDICTED: putative deoxyribonuclease TATDN1...    89   5e-31

>ref|XP_002264091.1| PREDICTED: putative deoxyribonuclease TATDN1 [Vitis vinifera]
           gi|296089369|emb|CBI39141.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score = 94.7 bits (234), Expect(2) = 5e-35
 Identities = 45/48 (93%), Positives = 46/48 (95%)
 Frame = +2

Query: 224 AGVDRIIVTGGSLEESKEALSIAETDARLFCTVGVHPTRCNEFEDSGD 367
           AGVDRIIVTGGSLEESKEAL+IAETD RLFCTVGVHPTRC EFEDSGD
Sbjct: 42  AGVDRIIVTGGSLEESKEALAIAETDGRLFCTVGVHPTRCKEFEDSGD 89



 Score = 78.2 bits (191), Expect(2) = 5e-35
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +1

Query: 31  MASVRMIDIAVNFTDSMFKGIYNGKQCHVADIATVLSRAW 150
           MA+VRMIDIAVNFTD+MFKGIYNGKQCHV+D+A VLSRAW
Sbjct: 1   MATVRMIDIAVNFTDNMFKGIYNGKQCHVSDLAAVLSRAW 40


>ref|NP_190807.3| TatD related DNase [Arabidopsis thaliana]
           gi|29028880|gb|AAO64819.1| At3g52390 [Arabidopsis
           thaliana] gi|110736520|dbj|BAF00227.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332645420|gb|AEE78941.1| TatD related DNase
           [Arabidopsis thaliana]
          Length = 320

 Score = 94.4 bits (233), Expect(2) = 3e-33
 Identities = 44/48 (91%), Positives = 47/48 (97%)
 Frame = +2

Query: 224 AGVDRIIVTGGSLEESKEALSIAETDARLFCTVGVHPTRCNEFEDSGD 367
           AGVDRIIVTGGSLEES+EAL+IAETD RLFCTVGVHPTRCNEFE+SGD
Sbjct: 42  AGVDRIIVTGGSLEESREALAIAETDGRLFCTVGVHPTRCNEFEESGD 89



 Score = 72.8 bits (177), Expect(2) = 3e-33
 Identities = 32/40 (80%), Positives = 37/40 (92%)
 Frame = +1

Query: 31  MASVRMIDIAVNFTDSMFKGIYNGKQCHVADIATVLSRAW 150
           MAS++MIDIAVNFTD MFKG+Y+GK CHV DIATVL+RAW
Sbjct: 1   MASLKMIDIAVNFTDGMFKGLYHGKNCHVPDIATVLNRAW 40


>ref|NP_001241560.1| uncharacterized protein LOC100814321 [Glycine max]
           gi|255648299|gb|ACU24602.1| unknown [Glycine max]
          Length = 319

 Score = 89.4 bits (220), Expect(2) = 6e-33
 Identities = 42/48 (87%), Positives = 45/48 (93%)
 Frame = +2

Query: 224 AGVDRIIVTGGSLEESKEALSIAETDARLFCTVGVHPTRCNEFEDSGD 367
           AGV RIIVTGGSLEES+EAL+IAETD RLFCTVGVHPTRC EFE+SGD
Sbjct: 42  AGVTRIIVTGGSLEESREALAIAETDGRLFCTVGVHPTRCKEFEESGD 89



 Score = 76.6 bits (187), Expect(2) = 6e-33
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +1

Query: 31  MASVRMIDIAVNFTDSMFKGIYNGKQCHVADIATVLSRAW 150
           MA +RMIDIAVNFTD MFKGIY+GKQCHV+DIATVL+RAW
Sbjct: 1   MAGIRMIDIAVNFTDGMFKGIYHGKQCHVSDIATVLNRAW 40


>ref|NP_974418.1| TatD related DNase [Arabidopsis thaliana]
           gi|332645421|gb|AEE78942.1| TatD related DNase
           [Arabidopsis thaliana]
          Length = 323

 Score = 94.4 bits (233), Expect(2) = 1e-31
 Identities = 44/48 (91%), Positives = 47/48 (97%)
 Frame = +2

Query: 224 AGVDRIIVTGGSLEESKEALSIAETDARLFCTVGVHPTRCNEFEDSGD 367
           AGVDRIIVTGGSLEES+EAL+IAETD RLFCTVGVHPTRCNEFE+SGD
Sbjct: 45  AGVDRIIVTGGSLEESREALAIAETDGRLFCTVGVHPTRCNEFEESGD 92



 Score = 67.4 bits (163), Expect(2) = 1e-31
 Identities = 32/43 (74%), Positives = 37/43 (86%), Gaps = 3/43 (6%)
 Frame = +1

Query: 31  MASVRMI---DIAVNFTDSMFKGIYNGKQCHVADIATVLSRAW 150
           MAS++MI   DIAVNFTD MFKG+Y+GK CHV DIATVL+RAW
Sbjct: 1   MASLKMIGKSDIAVNFTDGMFKGLYHGKNCHVPDIATVLNRAW 43


>ref|XP_004136520.1| PREDICTED: putative deoxyribonuclease TATDN1-like [Cucumis sativus]
          Length = 323

 Score = 89.4 bits (220), Expect(2) = 5e-31
 Identities = 42/48 (87%), Positives = 44/48 (91%)
 Frame = +2

Query: 224 AGVDRIIVTGGSLEESKEALSIAETDARLFCTVGVHPTRCNEFEDSGD 367
           AGV RIIVTGGSLEES+EAL IAETD RLFCTVGVHPTRC EFE+SGD
Sbjct: 42  AGVQRIIVTGGSLEESREALKIAETDGRLFCTVGVHPTRCKEFEESGD 89



 Score = 70.1 bits (170), Expect(2) = 5e-31
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = +1

Query: 31  MASVRMIDIAVNFTDSMFKGIYNGKQCHVADIATVLSRAW 150
           MA++RMIDIAVNFTD MFKGIY+GKQ H AD+A VLSRAW
Sbjct: 1   MATLRMIDIAVNFTDGMFKGIYHGKQYHAADLAAVLSRAW 40


Top