BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00023961
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302530.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_001416866.1| Ribosomal protein S20, component of cytosoli...    59   4e-07
ref|XP_003078013.1| ribosomal protein S20 (ISS) [Ostreococcus ta...    59   4e-07
ref|NP_001064232.1| Os10g0170200 [Oryza sativa Japonica Group] g...    58   7e-07
ref|XP_002468174.1| hypothetical protein SORBIDRAFT_01g041040 [S...    58   7e-07

>ref|XP_002302530.1| predicted protein [Populus trichocarpa] gi|222844256|gb|EEE81803.1|
           predicted protein [Populus trichocarpa]
          Length = 121

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 29/51 (56%), Positives = 39/51 (76%)
 Frame = -1

Query: 224 SLYSNNINNLIKCVLNLCLSGAKTRTLEVKGPVKIPTKVLKITARNSPCGE 72
           +L S N+ NL K   +L + GAK ++L+VKGPV+IPTKVL+IT R +PCGE
Sbjct: 26  TLSSKNVKNLEKVCADL-IRGAKDKSLKVKGPVRIPTKVLRITTRKAPCGE 75


>ref|XP_001416866.1| Ribosomal protein S20, component of cytosolic 80S ribosome and 40S
           small subunit [Ostreococcus lucimarinus CCE9901]
           gi|144577092|gb|ABO95159.1| Ribosomal protein S20,
           component of cytosolic 80S ribosome and 40S small
           subunit [Ostreococcus lucimarinus CCE9901]
          Length = 125

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = -1

Query: 224 SLYSNNINNLIKCVLNLCLSGAKTRTLEVKGPVKIPTKVLKITARNSPCGE 72
           +L S N+ NL K   +L + GAK + L+VKGPV++PTKVLK+T R SPCGE
Sbjct: 29  TLTSRNVKNLEKVCADL-IRGAKDKRLKVKGPVRMPTKVLKLTVRKSPCGE 78


>ref|XP_003078013.1| ribosomal protein S20 (ISS) [Ostreococcus tauri]
           gi|116056464|emb|CAL52753.1| ribosomal protein S20 (ISS)
           [Ostreococcus tauri]
          Length = 380

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/51 (56%), Positives = 38/51 (74%)
 Frame = -1

Query: 224 SLYSNNINNLIKCVLNLCLSGAKTRTLEVKGPVKIPTKVLKITARNSPCGE 72
           +L S N+ NL K   +L + GAK + L+VKGPV++PTKVLK+T R SPCGE
Sbjct: 285 TLTSRNVKNLEKVCADL-IRGAKDKRLKVKGPVRMPTKVLKLTVRKSPCGE 334


>ref|NP_001064232.1| Os10g0170200 [Oryza sativa Japonica Group]
           gi|21671882|gb|AAM74244.1|AC074355_6 Putative ribosomal
           protein S10p/S20e [Oryza sativa Japonica Group]
           gi|31430421|gb|AAP52338.1| 40S ribosomal protein S20,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113638841|dbj|BAF26146.1| Os10g0170200 [Oryza sativa
           Japonica Group] gi|125574149|gb|EAZ15433.1| hypothetical
           protein OsJ_30847 [Oryza sativa Japonica Group]
           gi|215768351|dbj|BAH00580.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 130

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/51 (58%), Positives = 36/51 (70%)
 Frame = -1

Query: 224 SLYSNNINNLIKCVLNLCLSGAKTRTLEVKGPVKIPTKVLKITARNSPCGE 72
           +L S N+ NL K   +L + GAK + L VKGPV+IPTKVL IT R SPCGE
Sbjct: 34  TLSSKNVKNLEKVCADL-VKGAKDKQLRVKGPVRIPTKVLHITTRKSPCGE 83


>ref|XP_002468174.1| hypothetical protein SORBIDRAFT_01g041040 [Sorghum bicolor]
           gi|241922028|gb|EER95172.1| hypothetical protein
           SORBIDRAFT_01g041040 [Sorghum bicolor]
          Length = 126

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/51 (58%), Positives = 36/51 (70%)
 Frame = -1

Query: 224 SLYSNNINNLIKCVLNLCLSGAKTRTLEVKGPVKIPTKVLKITARNSPCGE 72
           +L S N+ NL K   +L + GAK + L VKGPV+IPTKVL IT R SPCGE
Sbjct: 30  TLSSKNVKNLEKVCADL-VKGAKDKQLRVKGPVRIPTKVLHITTRKSPCGE 79