BLASTX nr result
ID: Coptis21_contig00023951
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00023951 (729 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI30028.3| unnamed protein product [Vitis vinifera] 233 3e-59 ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr... 233 3e-59 ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|2... 225 6e-57 ref|XP_003592856.1| Non-structural maintenance of chromosomes el... 217 2e-54 ref|XP_002529957.1| Non-structural maintenance of chromosome ele... 214 1e-53 >emb|CBI30028.3| unnamed protein product [Vitis vinifera] Length = 452 Score = 233 bits (594), Expect = 3e-59 Identities = 124/192 (64%), Positives = 143/192 (74%), Gaps = 2/192 (1%) Frame = -2 Query: 728 SSHPEELDNDA-EEKTDTDKNMSTMFNILRKKRSVRLEHLLLNRQSFAQTVENLFALSFL 552 S+ PEELD+ EEK+DTDKNMS MF+ILRK R VRLE+L+LNR SFAQTVENLFALSFL Sbjct: 257 SARPEELDDTVVEEKSDTDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFALSFL 316 Query: 551 VKDGRVEITVKDNGHHLVSPKNXXXXXXXASGEVSYSHFTFRLDFKDWKLMMDSVRNGEE 372 VKDGR EITV G HLVSP+N SGEV Y+HF FR DFKDWKLM SV GEE Sbjct: 317 VKDGRAEITVDGRGCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEE 376 Query: 371 LMPHRAQAEITNDFQGEPIPVDSQ-TAAPTTPIRKLCRNRGLVVQEESVVEDSPESNSAA 195 LMP R + N+ Q + + + + AAPTTPIRKL RNRGLV+QE++VVEDSPES+ A Sbjct: 377 LMPQRNSVNLPNNSQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQEQAVVEDSPESDDAG 436 Query: 194 DKAYAIRKGKRK 159 +A IRKGK K Sbjct: 437 TRAAVIRKGKGK 448 >ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4 [Vitis vinifera] Length = 380 Score = 233 bits (594), Expect = 3e-59 Identities = 124/192 (64%), Positives = 143/192 (74%), Gaps = 2/192 (1%) Frame = -2 Query: 728 SSHPEELDNDA-EEKTDTDKNMSTMFNILRKKRSVRLEHLLLNRQSFAQTVENLFALSFL 552 S+ PEELD+ EEK+DTDKNMS MF+ILRK R VRLE+L+LNR SFAQTVENLFALSFL Sbjct: 185 SARPEELDDTVVEEKSDTDKNMSIMFDILRKNRRVRLENLILNRNSFAQTVENLFALSFL 244 Query: 551 VKDGRVEITVKDNGHHLVSPKNXXXXXXXASGEVSYSHFTFRLDFKDWKLMMDSVRNGEE 372 VKDGR EITV G HLVSP+N SGEV Y+HF FR DFKDWKLM SV GEE Sbjct: 245 VKDGRAEITVDGRGCHLVSPRNAPAANAVVSGEVCYNHFVFRFDFKDWKLMATSVGAGEE 304 Query: 371 LMPHRAQAEITNDFQGEPIPVDSQ-TAAPTTPIRKLCRNRGLVVQEESVVEDSPESNSAA 195 LMP R + N+ Q + + + + AAPTTPIRKL RNRGLV+QE++VVEDSPES+ A Sbjct: 305 LMPQRNSVNLPNNSQTDSVAEECEAAAAPTTPIRKLSRNRGLVLQEQAVVEDSPESDDAG 364 Query: 194 DKAYAIRKGKRK 159 +A IRKGK K Sbjct: 365 TRAAVIRKGKGK 376 >ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|222867916|gb|EEF05047.1| predicted protein [Populus trichocarpa] Length = 313 Score = 225 bits (574), Expect = 6e-57 Identities = 113/176 (64%), Positives = 137/176 (77%), Gaps = 1/176 (0%) Frame = -2 Query: 728 SSHPEEL-DNDAEEKTDTDKNMSTMFNILRKKRSVRLEHLLLNRQSFAQTVENLFALSFL 552 S PEE+ D+ A+E+TDTDKNM+TMF+IL+ KRSV+LE+L+LNR SFAQTVENLFALSFL Sbjct: 137 SVQPEEVNDSGAKERTDTDKNMATMFSILKNKRSVKLENLVLNRNSFAQTVENLFALSFL 196 Query: 551 VKDGRVEITVKDNGHHLVSPKNXXXXXXXASGEVSYSHFTFRLDFKDWKLMMDSVRNGEE 372 VKDGR EI V +NG HLVSP+N SGEV+Y HF FR DFKDWKLM+ +V GEE Sbjct: 197 VKDGRAEIKVNENGWHLVSPRNAPDAGKVVSGEVAYRHFVFRFDFKDWKLMISAVEVGEE 256 Query: 371 LMPHRAQAEITNDFQGEPIPVDSQTAAPTTPIRKLCRNRGLVVQEESVVEDSPESN 204 LMP+R Q + +D +PIPV++Q PTTPIRK RNRGLV+QE++VVEDS N Sbjct: 257 LMPNRNQINMPSDSLADPIPVETQAGGPTTPIRKFSRNRGLVLQEKTVVEDSTPEN 312 >ref|XP_003592856.1| Non-structural maintenance of chromosomes element-like protein [Medicago truncatula] gi|355481904|gb|AES63107.1| Non-structural maintenance of chromosomes element-like protein [Medicago truncatula] Length = 384 Score = 217 bits (552), Expect = 2e-54 Identities = 118/194 (60%), Positives = 141/194 (72%), Gaps = 3/194 (1%) Frame = -2 Query: 728 SSHPEEL-DNDAEEKTDTDKNMSTMFNILRKKRSVRLEHLLLNRQSFAQTVENLFALSFL 552 ++ P++L D + EEKTDTDKNMSTMFNILR+ + V+LEHL+LNR SFAQTVENLFALSFL Sbjct: 190 TARPQQLQDTEGEEKTDTDKNMSTMFNILRENKKVQLEHLILNRFSFAQTVENLFALSFL 249 Query: 551 VKDGRVEITVKDNGHHLVSPKNXXXXXXXASGEVSYSHFTFRLDFKDWKLMMDSVRNGEE 372 VKDGR EI++ D H VSPKN S EVSY+HF FR D+KDWK+M D V +G+E Sbjct: 250 VKDGRAEISMDDKRSHYVSPKNAPAANSIMSKEVSYTHFVFRYDYKDWKIMKDIVPDGKE 309 Query: 371 LMPHRAQAEITNDFQGEPIPVDSQT-AAPTTPIRKLCRNRGLVVQEESVVEDSPE-SNSA 198 LMPHR Q D E + DS T A TPIRK+ RNRG V+QEESVVE+SPE + Sbjct: 310 LMPHRIQYSTAADPSQEEMGGDSSTQALAVTPIRKISRNRGRVLQEESVVEESPECDDEN 369 Query: 197 ADKAYAIRKGKRKL 156 A +A AIR+ KRKL Sbjct: 370 ASRAAAIRRCKRKL 383 >ref|XP_002529957.1| Non-structural maintenance of chromosome element, putative [Ricinus communis] gi|223530555|gb|EEF32434.1| Non-structural maintenance of chromosome element, putative [Ricinus communis] Length = 391 Score = 214 bits (546), Expect = 1e-53 Identities = 114/177 (64%), Positives = 132/177 (74%), Gaps = 1/177 (0%) Frame = -2 Query: 725 SHPEELDN-DAEEKTDTDKNMSTMFNILRKKRSVRLEHLLLNRQSFAQTVENLFALSFLV 549 S PEE+D+ +AE+KTDTD NMSTMF ILR+ + RLE+L+LNR+SFAQTVENLFALSFLV Sbjct: 206 SQPEEVDDSEAEKKTDTDNNMSTMFEILRRNKRARLENLILNRRSFAQTVENLFALSFLV 265 Query: 548 KDGRVEITVKDNGHHLVSPKNXXXXXXXASGEVSYSHFTFRLDFKDWKLMMDSVRNGEEL 369 KDGRVEI V +GHHLVSP+N SGEV+Y HF FR DFKDWK+MMD V G+EL Sbjct: 266 KDGRVEIIVDGSGHHLVSPRNAPAASSVMSGEVAYRHFVFRFDFKDWKVMMDMVPQGDEL 325 Query: 368 MPHRAQAEITNDFQGEPIPVDSQTAAPTTPIRKLCRNRGLVVQEESVVEDSPESNSA 198 MP R + + EP SQ TPIRKLCRNRGLVVQE+SVVEDSPE +A Sbjct: 326 MPDRKNSV----SETEPETNISQGNTNRTPIRKLCRNRGLVVQEDSVVEDSPEIEAA 378